Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.017G135500 Populus trichocarpa HOM05D006010 ORTHO05D007381 3.1e-166 588.6 334 100.0
Sabra17G0114300 Salix brachista HOM05D006010 ORTHO05D007381 1.2e-146 523.5 347 86.2
Sabra17G0111300 Salix brachista HOM05D006010 ORTHO05D007381 2.3e-145 519.2 347 85.9
TWI53G0527 Tripterygium wilfordii HOM05D006010 ORTHO05D007381 1.2e-93 347.4 336 60.4
Prupe.2G048000 Prunus persica HOM05D006010 ORTHO05D007381 1.2e-90 337.4 339 59.3
CiPaw.03G074500 Carya illinoinensis HOM05D006010 ORTHO05D007381 4.0e-89 332.4 337 59.6
Actinidia35721 Actinidia chinensis HOM05D006010 ORTHO05D007381 1.2e-82 310.8 340 57.1
Cfa007784 Carpinus fangiana HOM05D006010 ORTHO05D007381 2.1e-82 310.1 338 59.2
MD02G1273300 Malus domestica HOM05D006010 ORTHO05D007381 2.8e-82 309.7 337 55.5
Lj4g0009716 Lotus japonicus HOM05D006010 ORTHO05D007381 5.7e-80 302.0 337 54.9
Ciclev10026000m.g Citrus clementina HOM05D006010 ORTHO05D007381 7.5e-80 301.6 348 55.5
QL12p000853 Quercus lobata HOM05D006010 ORTHO05D007381 7.5e-80 301.6 386 50.5
PGSC0003DMG400013242 Solanum tuberosum HOM05D006010 ORTHO05D007381 1.3e-79 300.8 332 57.8
Haze_14288 Corylus avellana HOM05D006010 ORTHO05D007381 2.9e-79 299.7 338 57.7
Ca_05962_v3 Cicer arietinum L. HOM05D006010 ORTHO05D007381 6.4e-79 298.5 336 55.4
Rhsim10G0180400 Rhododendron simsii HOM05D006010 ORTHO05D007381 1.4e-78 297.4 331 55.0
Peaxi162Scf00464g00430 Petunia axillaris HOM05D006010 ORTHO05D007381 1.8e-78 297.0 332 57.2
Sopen11g006280 Solanum pennellii HOM05D006010 ORTHO05D007381 7.0e-78 295.0 332 56.3
Lalb_Chr10g0104261 Lupinus albus HOM05D006010 ORTHO05D007381 9.2e-78 294.7 337 54.3
Duzib235G0102 Durio zibethinus HOM05D006010 ORTHO05D007381 1.6e-77 293.9 339 57.2
Cpa.g.sc116.81 Carica papaya HOM05D006010 ORTHO05D007381 2.7e-77 293.1 380 51.1
Medtr5g077800 Medicago truncatula HOM05D006010 ORTHO05D007381 5.9e-77 292.0 335 53.7
RcHm_v2.0_Chr3g0492111 Rosa chinensis HOM05D006010 ORTHO05D007381 5.9e-77 292.0 337 53.4
Sed0022983 Sechium edule HOM05D006010 ORTHO05D007381 2.3e-76 290.0 336 55.4
MELO3C020924.2 Cucumis melo HOM05D006010 ORTHO05D007381 3.0e-76 289.7 337 56.4
Psat2g045640 Pisum sativum HOM05D006010 ORTHO05D007381 3.9e-76 289.3 340 55.0
Cc02_g11480 Coffea canephora HOM05D006010 ORTHO05D007381 1.5e-75 287.3 337 53.4
CsaV3_2G017210 Cucumis sativus L. HOM05D006010 ORTHO05D007381 1.5e-75 287.3 339 54.9
Phvul.004G098200 Phaseolus vulgaris HOM05D006010 ORTHO05D007381 2.5e-75 286.6 337 53.1
Hma1.2p1_0249F.1_g102390 Hydrangea macrophylla HOM05D006010 ORTHO05D007381 5.6e-75 285.4 338 56.8
Sed0003139 Sechium edule HOM05D006010 ORTHO05D007381 2.8e-74 283.1 340 53.8
CAN.G222.64 Capsicum annuum HOM05D006010 ORTHO05D007381 1.0e-73 281.2 332 54.8
MSTRG.15654 Avicennia marina HOM05D006010 ORTHO05D007381 1.4e-73 280.8 339 52.2
arahy.Tifrunner.gnm1.ann1.14A9Q3 Arachis hypogaea HOM05D006010 ORTHO05D007381 2.0e-72 276.9 339 55.2
arahy.Tifrunner.gnm1.ann1.RW4QB8 Arachis hypogaea HOM05D006010 ORTHO05D007381 2.6e-72 276.6 339 55.2
GSVIVG01015997001 Vitis vinifera HOM05D006010 ORTHO05D007381 3.4e-72 276.2 405 48.6
Eucgr.F02881 Eucalyptus grandis HOM05D006010 ORTHO05D007381 7.5e-72 275.0 338 54.7
FAN19G0427 Fragaria x ananassa HOM05D006010 ORTHO05D007381 9.8e-72 274.6 336 53.0
Atru.chr11.39 Acer truncatum HOM05D006010 ORTHO05D007381 1.3e-71 274.2 340 54.7
FvH4_1g30030 Fragaria vesca HOM05D006010 ORTHO05D007381 2.2e-71 273.5 336 52.7
arahy.Tifrunner.gnm1.ann1.ZG5C6W Arachis hypogaea HOM05D006010 ORTHO05D007381 2.9e-71 273.1 340 55.0
FAN28G0351 Fragaria x ananassa HOM05D006010 ORTHO05D007381 1.9e-70 270.4 344 50.6
Actinidia28796 Actinidia chinensis HOM05D006010 ORTHO05D007381 2.4e-70 270.0 310 53.5
EL10Ac3g05516 Beta vulgaris HOM05D006010 ORTHO05D007381 4.1e-70 269.2 335 50.7
PGR004G1862 Punica granatum HOM05D006010 ORTHO05D007381 1.6e-69 267.3 340 51.2
ClCG05G010670 Citrullus lanatus HOM05D006010 ORTHO05D007381 1.0e-68 264.6 332 51.2
TPR.G23647 Trifolium pratense HOM05D006010 ORTHO05D007381 1.0e-68 264.6 306 53.3
Lsat_1_v5_gn_3_65880 Lactuca sativa HOM05D006010 ORTHO05D007381 3.0e-68 263.1 338 50.6
Glyma.16G168300 Glycine max HOM05D006010 ORTHO05D007381 6.6e-68 261.9 339 52.8
Oeu048940.2 Olea europaea HOM05D006010 ORTHO05D007381 1.5e-67 260.8 373 51.7
ECA236G4224 Erigeron canadensis HOM05D006010 ORTHO05D007381 1.9e-67 260.4 336 51.5
MD07G1042200 Malus domestica HOM05D006010 ORTHO05D007381 1.9e-67 260.4 332 50.6
VMungo0464G0699 Vigna mungo HOM05D006010 ORTHO05D007381 3.3e-67 259.6 307 52.4
Nn3g17023 Nelumbo nucifera HOM05D006010 ORTHO05D007381 2.8e-66 256.5 352 48.0
CANSAT01G2297 Cannabis sativa HOM05D006010 ORTHO05D007381 3.6e-66 256.1 361 46.5
SalBow1G7757 Salvia bowleyana HOM05D006010 ORTHO05D007381 6.2e-66 255.4 345 48.1
FAN28G1345 Fragaria x ananassa HOM05D006010 ORTHO05D007381 1.4e-65 254.2 336 49.7
Glyma.02G082600 Glycine max HOM05D006010 ORTHO05D007381 1.4e-65 254.2 337 48.4
Hund11982 Selenicereus undatus HOM05D006010 ORTHO05D007381 1.8e-65 253.8 332 49.7
Migut.K00936 Erythranthe guttata HOM05D006010 ORTHO05D007381 3.1e-65 253.1 337 49.0
AUR62016215 Chenopodium quinoa HOM05D006010 ORTHO05D007381 5.2e-65 252.3 340 51.8
Thecc.06G019600 Theobroma cacao HOM05D006010 ORTHO05D007381 1.3e-63 247.7 376 47.1
HanXRQChr15g0482991 Helianthus annuus HOM05D006010 ORTHO05D007381 5.4e-62 242.3 335 52.5
Solyc11g011490.2 Solanum lycopersicum HOM05D006010 ORTHO05D007381 1.6e-61 240.7 280 52.1
FAN23G2851 Fragaria x ananassa HOM05D006010 ORTHO05D007381 7.8e-61 238.4 340 48.2
Sc22g0001300 Simmondsia chinensis HOM05D006010 ORTHO05D007381 3.0e-60 236.5 286 52.1
THA.LOC104827184 Tarenaya hassleriana HOM05D006010 ORTHO05D007381 3.9e-60 236.1 338 51.2
AUR62039273 Chenopodium quinoa HOM05D006010 ORTHO05D007381 1.1e-59 234.6 302 51.3
vmacro20589 Vaccinium macrocarpon HOM05D006010 ORTHO05D007381 1.5e-59 234.2 302 49.7
unitig_0.g1692 Utricularia gibba HOM05D006010 ORTHO05D007381 4.3e-59 232.6 353 45.9
DCAR_014157 Daucus carota HOM05D006010 ORTHO05D007381 7.3e-59 231.9 334 50.0
TWI74G0222 Tripterygium wilfordii HOM05D006010 ORTHO05D007381 8.4e-55 218.4 271 51.7
GSVIVG01015998001 Vitis vinifera HOM05D006010 ORTHO05D007381 4.1e-54 216.1 279 53.8
TAR623G0083 Trochodendron aralioides HOM05D006010 ORTHO05D007381 1.6e-53 214.2 367 42.5
COL.COLO4_31121 Corchorus olitorius HOM05D006010 ORTHO05D007381 6.0e-53 212.2 380 45.3
SGA_v2.0_scaffold115G32097 Striga asiatica HOM05D006010 ORTHO05D007381 1.3e-52 211.1 327 48.0
Manes.07G077600 Manihot esculenta HOM05D006010 ORTHO05D007381 2.3e-52 210.3 292 52.4
CDE09G0547 Ceratophyllum demersum HOM05D006010 ORTHO05D007381 6.6e-52 208.8 382 39.0
GSVIVG01016007001 Vitis vinifera HOM05D006010 ORTHO05D007381 2.8e-50 203.4 280 55.0
Sed0026765 Sechium edule HOM05D006010 ORTHO05D007381 3.6e-50 203.0 333 43.5
FAN26G2228 Fragaria x ananassa HOM05D006010 ORTHO05D007381 4.7e-50 202.6 290 47.6
Gohir.A10G157800 Gossypium hirsutum HOM05D006010 ORTHO05D007381 1.8e-49 200.7 426 39.9
Sp3g01890 Schrenkiella parvula HOM05D006010 ORTHO05D007381 3.1e-49 199.9 347 46.1
Os05g0495100 Oryza sativa ssp. japonica HOM05D006010 ORTHO05D007381 1.3e-47 194.5 384 42.7
Zm00001eb291600 Zea mays HOM05D006010 ORTHO05D007381 1.3e-47 194.5 368 42.7
Gorai.011G090700 Gossypium raimondii HOM05D006010 ORTHO05D007381 1.7e-47 194.1 428 39.5
Ah.05g176710 Amaranthus hybridus HOM05D006010 ORTHO05D007381 4.9e-47 192.6 401 37.9
Gohir.D10G083400 Gossypium hirsutum HOM05D006010 ORTHO05D007381 8.4e-47 191.8 430 39.3
BcaC05g30500 Brassica carinata HOM05D000919 ORTHO05D004442 5.4e-46 189.1 342 44.4
Carub.0003s0196 Capsella rubella HOM05D006010 ORTHO05D007381 2.7e-45 186.8 271 49.4
AL3G12280 Arabidopsis lyrata HOM05D006010 ORTHO05D007381 1.3e-44 184.5 269 47.2
AT3G02860 Arabidopsis thaliana HOM05D006010 ORTHO05D007381 1.7e-44 184.1 270 47.8
Aa31LG5G13330 Aethionema arabicum HOM05D006010 ORTHO05D007381 1.5e-43 181.0 379 38.3
A05p44250 Brassica napus HOM05D006010 ORTHO05D007381 9.6e-43 178.3 268 47.4
BraA06t23281Z Brassica rapa HOM05D000919 ORTHO05D004442 9.6e-43 178.3 268 47.4
Lj2A517G41 Lonicera japonica HOM05D006010 ORTHO05D007381 1.3e-42 177.9 238 50.0
C09p75990 Brassica napus HOM05D006010 ORTHO05D007381 2.4e-41 173.7 269 45.7
BolC5t35058H Brassica oleracea HOM05D006010 ORTHO05D007381 2.4e-41 173.7 269 45.7
Thhalv10021193m.g Eutrema salsugineum HOM05D006010 ORTHO05D007381 3.1e-41 173.3 271 46.1
Ca_05837_v3 Cicer arietinum L. HOM05D006010 ORTHO05D007381 2.9e-39 166.8 139 71.9
TPR.G23699 Trifolium pratense HOM05D005584 ORTHO05D006809 1.1e-38 164.9 207 49.8
GSVIVG01016005001 Vitis vinifera HOM05D006010 ORTHO05D007381 1.4e-38 164.5 137 68.6
CARHR076870 Cardamine hirsuta HOM05D006010 ORTHO05D007381 2.1e-37 160.6 268 45.9
AagrBONN_evm.TU.Sc2ySwM_369.381 Anthoceros agrestis HOM05D006010 ORTHO05D007381 3.0e-36 156.8 291 39.5
CSS0039891 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 3.0e-36 156.8 137 64.2
PSO478G0898 Papaver somniferum HOM05D006010 ORTHO05D007381 1.9e-35 154.1 281 42.0
SEGI_17538 Sequoiadendron giganteum HOM05D006010 ORTHO05D007381 3.3e-35 153.3 247 40.1
FAN25G0538 Fragaria x ananassa HOM05D006010 ORTHO05D007381 4.0e-33 146.4 139 62.6
Ca_05839_v3 Cicer arietinum L. HOM05D006010 ORTHO05D007381 5.8e-32 142.5 132 60.6
Mapoly0044s0136 Marchantia polymorpha HOM05D006010 ORTHO05D007381 2.9e-31 140.2 338 37.6
ATR0320G006 Amborella trichopoda HOM05D006010 ORTHO05D007381 8.4e-31 138.7 159 54.7
SHI30126 Sapria himalayana HOM05D006010 ORTHO05D007381 1.1e-30 138.3 161 58.4
PSO017G1892 Papaver somniferum HOM05D006010 ORTHO05D007381 1.4e-30 137.9 365 37.0
CSS0001849 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 2.8e-26 123.6 110 67.3
CSS0044569 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 2.8e-26 123.6 110 67.3
Aqoxy3G00232 Aquilegia oxysepala HOM05D006010 ORTHO05D007381 1.8e-25 120.9 286 38.8
Lj2A517G40 Lonicera japonica HOM05D006010 ORTHO05D007381 1.1e-22 111.7 103 64.1
ATR0320G008 Amborella trichopoda HOM05D006010 ORTHO05D007381 2.1e-21 107.5 138 43.5
Sed0018686 Sechium edule HOM05D006010 ORTHO05D007381 6.0e-21 105.9 65 78.5
Sed0023512 Sechium edule HOM05D006010 ORTHO05D007381 1.0e-20 105.1 63 81.0
Nitab4.5_0011135g0050 Nicotiana tabacum HOM05D006010 ORTHO05D007381 1.3e-20 104.8 140 49.3
SHI30124 Sapria himalayana HOM05D006010 ORTHO05D007381 3.7e-18 96.7 118 47.5
GSVIVG01016036001 Vitis vinifera HOM05D006010 ORTHO05D007381 4.5e-16 89.7 67 70.1
FAN21G0982 Fragaria x ananassa HOM05D006010 ORTHO05D007381 1.0e-15 88.6 139 43.2
Pp3c12_7630 Physcomitrium patens HOM05D006010 ORTHO05D007381 1.4e-14 84.7 129 41.9
Glyma.14G212900 Glycine max HOM05D026408 ORTHO05D029776 4.8e-10 69.7 168 33.3
TPR.G36575 Trifolium pratense HOM05D006010 ORTHO05D007381 4.5e-08 63.2 95 45.3
Phvul.008G238000 Phaseolus vulgaris HOM05D026408 ORTHO05D029776 7.7e-08 62.4 193 34.7
CSS0015748 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 5.0e-07 59.7 105 40.0
CSS0044039 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 5.0e-07 59.7 105 40.0


User provided reference genes

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