Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.016G023500 Populus trichocarpa HOM05D005856 ORTHO05D007264 1.3e-261 906.0 486 100.0
Potri.006G025300 Populus trichocarpa HOM05D005856 ORTHO05D007264 1.7e-218 762.7 495 80.8
Sabra06G0018600 Salix brachista HOM05D005856 ORTHO05D007264 3.3e-209 731.9 526 74.7
Atru.chr11.2307 Acer truncatum HOM05D005856 ORTHO05D007264 9.3e-188 660.6 490 70.0
Manes.13G018400 Manihot esculenta HOM05D005856 ORTHO05D007264 3.0e-186 655.6 507 69.8
Ciclev10031347m.g Citrus clementina HOM05D005856 ORTHO05D007264 3.3e-185 652.1 495 69.1
Duzib248G0543 Durio zibethinus HOM05D005856 ORTHO05D007264 1.6e-184 649.8 500 69.0
Thecc.02G210800 Theobroma cacao HOM05D005856 ORTHO05D007264 9.0e-183 644.0 490 69.6
Gohir.A04G139000 Gossypium hirsutum HOM05D005856 ORTHO05D007264 7.6e-182 641.0 493 69.4
QL03p053723 Quercus lobata HOM05D005856 ORTHO05D007264 1.3e-181 640.2 494 69.0
ClCG08G010110 Citrullus lanatus HOM05D005856 ORTHO05D007264 2.9e-181 639.0 449 72.2
CsaV3_6G032280 Cucumis sativus L. HOM05D005856 ORTHO05D007264 1.4e-180 636.7 448 73.0
arahy.Tifrunner.gnm1.ann1.E9QWSH Arachis hypogaea HOM05D005856 ORTHO05D007264 5.4e-180 634.8 440 75.0
Gorai.012G175300 Gossypium raimondii HOM05D005856 ORTHO05D007264 7.1e-180 634.4 508 67.3
COL.COLO4_20381 Corchorus olitorius HOM05D005856 ORTHO05D007264 9.3e-180 634.0 500 68.0
PGR119G1218 Punica granatum HOM05D005856 ORTHO05D007264 3.9e-178 628.6 500 67.0
arahy.Tifrunner.gnm1.ann1.ID6EX5 Arachis hypogaea HOM05D005856 ORTHO05D007264 6.7e-178 627.9 440 74.3
MELO3C011452.2 Cucumis melo HOM05D005856 ORTHO05D007264 6.7e-178 627.9 505 66.7
CANSAT01G0688 Cannabis sativa HOM05D005856 ORTHO05D007264 3.3e-177 625.5 412 76.7
Cfa009330 Carpinus fangiana HOM05D005856 ORTHO05D007264 1.8e-175 619.8 423 75.4
Prupe.1G228400 Prunus persica HOM05D005856 ORTHO05D007264 1.8e-175 619.8 435 73.8
Eucgr.H04651 Eucalyptus grandis HOM05D005856 ORTHO05D007264 4.0e-175 618.6 505 66.1
Glyma.18G007700 Glycine max HOM05D005856 ORTHO05D007264 1.2e-174 617.1 433 73.4
Sed0007662 Sechium edule HOM05D005856 ORTHO05D007264 3.4e-174 615.5 447 70.0
Lj3g0022861 Lotus japonicus HOM05D005856 ORTHO05D007264 5.8e-174 614.8 489 66.5
Peaxi162Scf00128g01130 Petunia axillaris HOM05D005856 ORTHO05D007264 1.9e-172 609.8 432 72.2
Actinidia20701 Actinidia chinensis HOM05D005856 ORTHO05D007264 4.2e-172 608.6 498 64.9
Glyma.11G249500 Glycine max HOM05D005856 ORTHO05D007264 5.5e-172 608.2 427 73.8
CSS0025471 Camellia sinensis var. sinensis HOM05D005856 ORTHO05D007264 1.6e-171 606.7 499 63.7
Medtr3g085550 Medicago truncatula HOM05D005856 ORTHO05D007264 1.6e-171 606.7 492 64.6
CiPaw.05G111700 Carya illinoinensis HOM05D005856 ORTHO05D007264 3.5e-171 605.5 394 78.7
Lalb_Chr11g0075741 Lupinus albus HOM05D005856 ORTHO05D007264 6.0e-171 604.7 456 70.6
Rhsim12G0099000 Rhododendron simsii HOM05D005856 ORTHO05D007264 1.0e-170 604.0 494 65.4
Haze_12395 Corylus avellana HOM05D005856 ORTHO05D007264 3.0e-170 602.4 411 75.7
Thhalv10019531m.g Eutrema salsugineum HOM05D005856 ORTHO05D007264 6.7e-170 601.3 434 70.0
TPR.G28278 Trifolium pratense HOM05D005856 ORTHO05D007264 6.7e-170 601.3 492 65.4
SalBow1G2377 Salvia bowleyana HOM05D005856 ORTHO05D007264 1.1e-169 600.5 488 63.3
MD13G1117100 Malus domestica HOM05D005856 ORTHO05D007264 5.6e-169 598.2 509 65.0
BcaB03g15198 Brassica carinata HOM05D005856 ORTHO05D007264 9.6e-169 597.4 495 62.6
Solyc05g015310.3 Solanum lycopersicum HOM05D005856 ORTHO05D007264 9.6e-169 597.4 443 70.0
THA.LOC104807593 Tarenaya hassleriana HOM05D005856 ORTHO05D007264 1.6e-168 596.7 441 69.4
Oeu036879.1 Olea europaea HOM05D005856 ORTHO05D007264 2.1e-168 596.3 436 69.5
Psat5g095080 Pisum sativum HOM05D005856 ORTHO05D007264 3.7e-168 595.5 434 70.3
Sopen05g010580 Solanum pennellii HOM05D005856 ORTHO05D007264 3.7e-168 595.5 443 69.8
BraA07t31027Z Brassica rapa HOM05D005856 ORTHO05D007264 1.1e-167 594.0 496 62.7
Nitab4.5_0000379g0010 Nicotiana tabacum HOM05D005856 ORTHO05D007264 1.1e-167 594.0 443 69.8
A07p34000 Brassica napus HOM05D005856 ORTHO05D007264 2.4e-167 592.8 492 62.8
ECA233G1277 Erigeron canadensis HOM05D005856 ORTHO05D007264 2.4e-167 592.8 439 69.2
CSS0003803 Camellia sinensis var. sinensis HOM05D005856 ORTHO05D007264 3.1e-167 592.4 538 59.7
Sp5g22410 Schrenkiella parvula HOM05D005856 ORTHO05D007264 4.0e-167 592.0 436 68.3
AL2G26010 Arabidopsis lyrata HOM05D005856 ORTHO05D007264 5.3e-167 591.7 436 69.5
Carub.0002s1377 Capsella rubella HOM05D005856 ORTHO05D007264 5.3e-167 591.7 492 63.4
AT1G67440 Arabidopsis thaliana HOM05D005856 ORTHO05D007264 2.0e-166 589.7 490 64.3
Nitab4.5_0000367g0010 Nicotiana tabacum HOM05D005856 ORTHO05D007264 4.5e-166 588.6 443 68.8
CARHR059980 Cardamine hirsuta HOM05D005856 ORTHO05D007264 5.8e-166 588.2 495 61.8
TWI36G0309 Tripterygium wilfordii HOM05D005856 ORTHO05D007264 1.0e-165 587.4 466 67.0
VMungo1383G1560 Vigna mungo HOM05D005856 ORTHO05D007264 1.0e-165 587.4 393 75.6
BcaC08g46160 Brassica carinata HOM05D005856 ORTHO05D007264 1.3e-165 587.0 435 68.7
FAN07G1943 Fragaria x ananassa HOM05D005856 ORTHO05D007264 2.9e-165 585.9 499 64.7
Aqoxy5G03410 Aquilegia oxysepala HOM05D005856 ORTHO05D007264 4.9e-165 585.1 415 69.4
Aa31sc1092G20 Aethionema arabicum HOM05D005856 ORTHO05D007264 6.5e-165 584.7 435 69.4
CAN.G43.18 Capsicum annuum HOM05D005856 ORTHO05D007264 1.4e-164 583.6 440 68.6
SGA_v2.0_scaffold135G34936 Striga asiatica HOM05D005856 ORTHO05D007264 3.2e-164 582.4 407 73.5
FvH4_4g23940 Fragaria vesca HOM05D005856 ORTHO05D007264 5.5e-164 581.6 499 64.5
FAN17G0012 Fragaria x ananassa HOM05D005856 ORTHO05D007264 7.1e-164 581.3 499 64.1
Phvul.001G260800 Phaseolus vulgaris HOM05D005856 ORTHO05D007264 2.1e-163 579.7 435 69.4
Lj3A1066G66 Lonicera japonica HOM05D005856 ORTHO05D007264 2.7e-163 579.3 408 71.6
DCAR_031194 Daucus carota HOM05D005856 ORTHO05D007264 4.6e-163 578.6 433 69.1
PGSC0003DMG400015053 Solanum tuberosum HOM05D005856 ORTHO05D007264 1.3e-162 577.0 440 68.6
TAR622G1129 Trochodendron aralioides HOM05D005856 ORTHO05D007264 1.8e-162 576.6 488 63.3
FAN22G0691 Fragaria x ananassa HOM05D005856 ORTHO05D007264 3.0e-162 575.9 499 63.7
Cpa.g.sc351.3 Carica papaya HOM05D005856 ORTHO05D007264 2.1e-160 569.7 483 63.6
RcHm_v2.0_Chr4g0430601 Rosa chinensis HOM05D005856 ORTHO05D007264 3.7e-160 568.9 474 64.8
Sc04g0010050 Simmondsia chinensis HOM05D005856 ORTHO05D007264 8.2e-160 567.8 434 68.0
unitig_88.g27631 Utricularia gibba HOM05D005856 ORTHO05D007264 1.8e-159 566.6 451 63.9
GSVIVG01010446001 Vitis vinifera HOM05D005856 ORTHO05D007264 3.4e-158 562.4 371 77.1
EL10Ac6g13483 Beta vulgaris HOM05D005856 ORTHO05D007264 1.4e-156 557.0 410 69.3
Hund06082 Selenicereus undatus HOM05D005856 ORTHO05D007264 1.6e-155 553.5 449 64.6
Lsat_1_v5_gn_8_149340 Lactuca sativa HOM05D005856 ORTHO05D007264 3.0e-154 549.3 403 70.2
BolC6t39153H Brassica oleracea HOM05D005856 ORTHO05D007264 5.7e-153 545.0 492 59.8
PSO782G2456 Papaver somniferum HOM05D005856 ORTHO05D007264 1.6e-152 543.5 412 67.5
ATR0561G073 Amborella trichopoda HOM05D005856 ORTHO05D007264 1.8e-151 540.0 358 73.7
C06p42840 Brassica napus HOM05D005856 ORTHO05D007264 3.4e-150 535.8 501 58.7
AUR62005603 Chenopodium quinoa HOM05D005856 ORTHO05D007264 7.7e-150 534.6 543 55.6
Migut.H00051 Erythranthe guttata HOM05D005856 ORTHO05D007264 1.4e-148 530.4 421 65.1
CDE05G3252 Ceratophyllum demersum HOM05D005856 ORTHO05D007264 4.6e-147 525.4 419 65.9
Nn4g22353 Nelumbo nucifera HOM05D005856 ORTHO05D007264 7.9e-147 524.6 440 62.7
HanXRQChr08g0207721 Helianthus annuus HOM05D005856 ORTHO05D007264 2.0e-145 520.0 436 62.8
Gohir.D04G181900 Gossypium hirsutum HOM05D005856 ORTHO05D007264 2.4e-143 513.1 491 59.7
AUR62024126 Chenopodium quinoa HOM05D005856 ORTHO05D007264 1.2e-142 510.8 404 65.3
Dinv14826 Davidia involucrata HOM05D005856 ORTHO05D007264 7.7e-142 508.1 428 62.9
Manes.12G012850 Manihot esculenta HOM05D005856 ORTHO05D007264 6.5e-141 505.0 455 61.8
Os04g0381600 Oryza sativa ssp. japonica HOM05D005856 ORTHO05D007264 1.2e-139 500.7 396 63.1
HPP92_024239 Vanilla planifolia HOM05D005856 ORTHO05D007264 4.8e-136 488.8 433 58.4
SEGI_12163 Sequoiadendron giganteum HOM05D005856 ORTHO05D007264 4.7e-131 472.2 352 65.1
Sp5g22430 Schrenkiella parvula HOM05D005856 ORTHO05D007264 3.1e-127 459.5 403 58.6
AL2G26030 Arabidopsis lyrata HOM05D005856 ORTHO05D007264 6.5e-125 451.8 403 58.6
PSO063G1304 Papaver somniferum HOM05D005856 ORTHO05D007264 2.1e-123 446.8 413 58.8
Zm00001eb420890 Zea mays HOM05D005856 ORTHO05D007264 1.1e-119 434.5 347 63.7
Ca_16469_v3 Cicer arietinum L. HOM05D005856 ORTHO05D007264 3.1e-119 433.0 310 71.6
Cc11_g00900 Coffea canephora HOM05D005856 ORTHO05D007264 1.5e-116 424.1 304 68.1
Thhalv10019423m.g Eutrema salsugineum HOM05D005856 ORTHO05D007264 2.0e-113 413.7 338 61.2
HPP92_013615 Vanilla planifolia HOM05D005856 ORTHO05D007264 2.7e-110 403.3 354 59.6
Mapoly0076s0016 Marchantia polymorpha HOM05D005856 ORTHO05D007264 2.5e-108 396.7 470 48.3
AagrBONN_evm.TU.Sc2ySwM_344.2476 Anthoceros agrestis HOM05D005856 ORTHO05D007264 5.6e-108 395.6 423 50.8
Pp3c14_19540 Physcomitrium patens HOM05D005856 ORTHO05D007264 2.6e-105 386.7 432 48.4
SMO236G0063 Selaginella moellendorffii HOM05D005856 ORTHO05D007264 7.5e-105 385.2 390 52.3
CARHR068030 Cardamine hirsuta HOM05D005856 ORTHO05D007264 1.2e-99 367.9 402 52.0
Actinidia26816 Actinidia chinensis HOM05D005856 ORTHO05D007264 3.6e-99 366.3 270 68.1
CBR_g49528 Chara braunii HOM05D005856 ORTHO05D007264 2.9e-96 356.7 387 48.3
FAN12G0203 Fragaria x ananassa HOM05D005856 ORTHO05D007264 3.2e-95 353.2 249 69.9
Ah.03g136240 Amaranthus hybridus HOM05D005856 ORTHO05D007264 7.8e-94 348.6 269 67.3
Carub.0002s1379 Capsella rubella HOM05D005856 ORTHO05D007264 3.4e-81 306.6 346 48.8
AUR62005602 Chenopodium quinoa HOM05D005856 ORTHO05D007264 1.3e-77 294.7 330 50.0
MCO13G068 Micromonas commoda HOM05D005856 ORTHO05D007264 1.5e-73 281.2 356 45.8
PRCOL_00004669 Prasinoderma coloniale HOM05D005856 ORTHO05D007264 1.4e-66 258.1 468 36.8
AT1G67460 Arabidopsis thaliana HOM05D005856 ORTHO05D007264 4.0e-66 256.5 229 59.4
ECA240G4225 Erigeron canadensis HOM05D005856 ORTHO05D007264 7.6e-57 225.7 281 47.7
Cre10.g436600 Chlamydomonas reinhardtii HOM05D005856 ORTHO05D007264 3.0e-53 213.8 482 32.0
MD07G1133300 Malus domestica HOM05D005856 ORTHO05D007264 9.1e-34 149.1 116 70.7
Cfa005743 Carpinus fangiana HOM05D005856 ORTHO05D007264 4.5e-33 146.7 137 63.5
Haze_12396 Corylus avellana HOM05D005856 ORTHO05D007264 1.4e-31 141.7 123 62.6
Medtr3g085580 Medicago truncatula HOM05D005856 ORTHO05D007264 5.5e-31 139.8 187 47.1
SMO199G0052 Selaginella moellendorffii HOM05D005856 ORTHO05D007264 1.1e-26 125.6 175 41.7
Dinv17562 Davidia involucrata HOM05D005856 ORTHO05D015634 6.7e-21 106.3 106 50.0
SMO199G0068 Selaginella moellendorffii HOM05D005856 ORTHO05D007264 8.2e-19 99.4 200 34.0
VMungo0464G1347 Vigna mungo HOM05D005856 ORTHO05D007264 1.2e-17 95.5 126 51.6
SMO361G0803 Selaginella moellendorffii HOM05D005856 ORTHO05D007264 1.7e-16 91.7 113 43.4
SMO199G0090 Selaginella moellendorffii HOM05D005856 ORTHO05D007264 2.9e-16 90.9 89 51.7
AL2G26330 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 3.3e-12 77.4 68 51.5
Rhsim10G0039300 Rhododendron simsii HOM05D005856 ORTHO05D007264 1.3e-11 75.5 54 70.4
Migut.O00545 Erythranthe guttata HOM05D005856 ORTHO05D007264 5.3e-10 70.1 90 50.0
SalBow4G2969 Salvia bowleyana HOM05D005856 ORTHO05D015634 5.3e-10 70.1 54 61.1
Cc02_g32220 Coffea canephora HOM05D005856 ORTHO05D007264 1.6e-09 68.6 100 49.0
SMO364G0554 Selaginella moellendorffii HOM05D005827 ORTHO05D005864 2.0e-09 68.2 265 27.2


User provided reference genes

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