Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.015G091700 Populus trichocarpa HOM05D006589 ORTHO05D008350 0.0e+00 1365.9 678 100.0
Sabra15G0113500 Salix brachista HOM05D006589 ORTHO05D008350 0.0e+00 1312.4 675 95.3
Manes.14G054400 Manihot esculenta HOM05D006589 ORTHO05D008350 1.9e-311 1072.0 692 78.0
Thecc.03G124600 Theobroma cacao HOM05D006589 ORTHO05D008350 2.8e-307 1058.1 683 76.9
COL.COLO4_16830 Corchorus olitorius HOM05D006589 ORTHO05D008350 1.7e-301 1038.9 689 76.3
Gohir.D07G057600 Gossypium hirsutum HOM05D006589 ORTHO05D008350 5.1e-301 1037.3 690 75.5
Gohir.A07G053200 Gossypium hirsutum HOM05D006589 ORTHO05D008350 6.6e-301 1036.9 688 75.6
THA.LOC104798952 Tarenaya hassleriana HOM05D006589 ORTHO05D008350 2.5e-300 1035.0 682 75.8
Prupe.5G155500 Prunus persica HOM05D006589 ORTHO05D008350 5.6e-300 1033.9 675 74.8
Eucgr.B00143 Eucalyptus grandis HOM05D006589 ORTHO05D008350 9.6e-300 1033.1 633 78.4
Dinv04849 Davidia involucrata HOM05D006589 ORTHO05D008350 2.4e-298 1028.5 687 75.1
Gorai.001G061100 Gossypium raimondii HOM05D006589 ORTHO05D008350 9.0e-298 1026.5 682 76.2
Actinidia36794 Actinidia chinensis HOM05D006589 ORTHO05D008350 7.6e-297 1023.5 684 74.9
Cfa018872 Carpinus fangiana HOM05D006589 ORTHO05D008350 2.9e-296 1021.5 683 75.1
PGR083G2113 Punica granatum HOM05D006589 ORTHO05D008350 2.9e-296 1021.5 683 73.6
Haze_07256 Corylus avellana HOM05D006589 ORTHO05D008350 1.9e-295 1018.8 689 74.5
CSS0007976 Camellia sinensis var. sinensis HOM05D006589 ORTHO05D008350 9.3e-295 1016.5 683 74.2
CANSAT80G0035 Cannabis sativa HOM05D006589 ORTHO05D008350 4.6e-294 1014.2 684 73.0
TWI23G0930 Tripterygium wilfordii HOM05D006589 ORTHO05D008350 7.9e-294 1013.4 675 72.7
MD14G1162400 Malus domestica HOM05D006589 ORTHO05D008350 3.3e-292 1008.1 678 72.1
Glyma.04G193700 Glycine max HOM05D006589 ORTHO05D008350 9.6e-292 1006.5 676 73.2
Ciclev10019152m.g Citrus clementina HOM05D006589 ORTHO05D008350 3.6e-291 1004.6 679 74.5
FvH4_5g07670 Fragaria vesca HOM05D006589 ORTHO05D008350 3.6e-291 1004.6 677 73.3
CsaV3_1G000740 Cucumis sativus L. HOM05D006589 ORTHO05D008350 4.8e-291 1004.2 678 73.9
QL10p004744 Quercus lobata HOM05D006589 ORTHO05D008350 1.4e-290 1002.7 694 73.6
TAR622G1334 Trochodendron aralioides HOM05D006589 ORTHO05D008350 6.9e-290 1000.3 686 74.1
FAN18G3475 Fragaria x ananassa HOM05D006589 ORTHO05D008350 2.0e-289 998.8 677 73.0
RcHm_v2.0_Chr7g0190801 Rosa chinensis HOM05D006589 ORTHO05D008350 2.0e-289 998.8 683 73.8
FAN13G0522 Fragaria x ananassa HOM05D006589 ORTHO05D008350 3.4e-289 998.0 677 73.6
Atru.chr9.1023 Acer truncatum HOM05D006589 ORTHO05D008350 4.5e-289 997.7 625 76.6
FAN04G1748 Fragaria x ananassa HOM05D006589 ORTHO05D008350 7.6e-289 996.9 677 73.1
FAN08G0518 Fragaria x ananassa HOM05D006589 ORTHO05D008350 6.0e-286 987.3 679 72.2
Glyma.06G172400 Glycine max HOM05D006589 ORTHO05D008350 1.0e-285 986.5 677 72.7
Peaxi162Scf00089g00326 Petunia axillaris HOM05D006589 ORTHO05D008350 1.0e-285 986.5 658 75.4
Nitab4.5_0005327g0070 Nicotiana tabacum HOM05D006589 ORTHO05D008350 2.3e-285 985.3 685 72.6
Nn4g22414 Nelumbo nucifera HOM05D006589 ORTHO05D008350 3.9e-285 984.6 675 73.3
Ca_15262_v3 Cicer arietinum L. HOM05D006589 ORTHO05D008350 2.5e-284 981.9 681 71.7
Nitab4.5_0001664g0100 Nicotiana tabacum HOM05D006589 ORTHO05D008350 1.6e-283 979.2 685 72.4
Duzib205G1155 Durio zibethinus HOM05D006589 ORTHO05D008350 2.1e-283 978.8 687 72.5
Thhalv10010171m.g Eutrema salsugineum HOM05D006589 ORTHO05D008350 3.7e-283 978.0 675 73.3
Sc22g0004160 Simmondsia chinensis HOM05D006589 ORTHO05D008350 1.4e-282 976.1 675 72.4
BcaB05g23014 Brassica carinata HOM05D006589 ORTHO05D008350 5.3e-282 974.2 667 72.7
BcaC09g49867 Brassica carinata HOM05D006589 ORTHO05D008350 9.0e-282 973.4 669 72.3
CARHR157250 Cardamine hirsuta HOM05D006589 ORTHO05D008350 9.0e-282 973.4 678 72.3
AL5G27930 Arabidopsis lyrata HOM05D006589 ORTHO05D008350 1.5e-281 972.6 676 72.3
BraA01t02452Z Brassica rapa HOM05D006589 ORTHO05D008350 3.4e-281 971.5 610 76.2
C01p32170 Brassica napus HOM05D006589 ORTHO05D008350 5.8e-281 970.7 669 72.0
Carub.0005s1468 Capsella rubella HOM05D006589 ORTHO05D008350 7.6e-281 970.3 636 75.6
Aa31LG4G17110 Aethionema arabicum HOM05D006589 ORTHO05D008350 1.0e-280 969.9 676 71.9
A01p25610 Brassica napus HOM05D006589 ORTHO05D008350 1.7e-280 969.1 610 76.1
BolC1t03137H Brassica oleracea HOM05D006589 ORTHO05D008350 2.2e-280 968.8 669 72.0
Cpa.g.sc4.99 Carica papaya HOM05D006589 ORTHO05D008350 2.2e-280 968.8 683 72.6
EL10As4g23464 Beta vulgaris HOM05D006589 ORTHO05D008350 8.4e-280 966.8 682 69.1
Sp5g13530 Schrenkiella parvula HOM05D006589 ORTHO05D008350 2.5e-279 965.3 673 71.9
Medtr3g075050 Medicago truncatula HOM05D006589 ORTHO05D008350 5.5e-279 964.1 675 69.6
Phvul.009G168200 Phaseolus vulgaris HOM05D006589 ORTHO05D008350 2.1e-278 962.2 681 70.0
Migut.I00491 Erythranthe guttata HOM05D006589 ORTHO05D008350 1.3e-277 959.5 690 71.0
PGSC0003DMG400015251 Solanum tuberosum HOM05D006589 ORTHO05D008350 5.1e-277 957.6 684 71.3
Lj1g0010015 Lotus japonicus HOM05D006589 ORTHO05D008350 8.7e-277 956.8 684 70.2
Psat5g140160 Pisum sativum HOM05D006589 ORTHO05D008350 5.7e-276 954.1 670 70.4
Solyc03g111050.3 Solanum lycopersicum HOM05D006589 ORTHO05D008350 7.4e-276 953.7 684 71.3
Sopen03g030220 Solanum pennellii HOM05D006589 ORTHO05D008350 4.1e-274 948.0 683 70.9
TPR.G26148 Trifolium pratense HOM05D006589 ORTHO05D008350 4.1e-274 948.0 690 68.4
DCAR_007473 Daucus carota HOM05D006589 ORTHO05D008350 1.2e-273 946.4 681 70.3
PSO063G3222 Papaver somniferum HOM05D006589 ORTHO05D008350 1.5e-273 946.0 698 70.1
arahy.Tifrunner.gnm1.ann1.DGQ22E Arachis hypogaea HOM05D006589 ORTHO05D008350 2.0e-273 945.7 690 69.7
PSO782G1921 Papaver somniferum HOM05D006589 ORTHO05D008350 2.6e-273 945.3 700 67.7
SalBow5G0933 Salvia bowleyana HOM05D006589 ORTHO05D008350 2.6e-273 945.3 672 71.6
SalBow5G1883 Salvia bowleyana HOM05D006589 ORTHO05D008350 2.6e-273 945.3 671 71.7
arahy.Tifrunner.gnm1.ann1.RTQA9M Arachis hypogaea HOM05D006589 ORTHO05D008350 3.4e-273 944.9 690 69.9
Sed0022036 Sechium edule HOM05D006589 ORTHO05D008350 1.0e-272 943.3 681 70.6
Lalb_Chr11g0069681 Lupinus albus HOM05D006589 ORTHO05D008350 2.9e-272 941.8 686 70.0
Aqoxy5G03523 Aquilegia oxysepala HOM05D006589 ORTHO05D008350 2.5e-271 938.7 635 72.6
ClCG06G017720 Citrullus lanatus HOM05D006589 ORTHO05D008350 2.5e-271 938.7 680 70.6
AT3G48500 Arabidopsis thaliana HOM05D006589 ORTHO05D008350 8.2e-267 923.7 673 69.7
Lj5A99T74 Lonicera japonica HOM05D006589 ORTHO05D008350 1.2e-265 919.8 708 67.1
HanXRQChr05g0158451 Helianthus annuus HOM05D006589 ORTHO05D008350 8.5e-264 913.7 626 70.0
Hund02417 Selenicereus undatus HOM05D006589 ORTHO05D008350 1.1e-263 913.3 620 71.5
Lsat_1_v5_gn_5_13320 Lactuca sativa HOM05D006589 ORTHO05D008350 1.1e-260 903.3 631 68.5
CDE02G2664 Ceratophyllum demersum HOM05D006589 ORTHO05D008350 1.7e-256 889.4 629 69.2
GSVIVG01008490001 Vitis vinifera HOM05D006589 ORTHO05D008350 7.2e-255 884.0 557 77.9
Rhsim12G0172500 Rhododendron simsii HOM05D006589 ORTHO05D008350 1.8e-250 869.4 691 64.8
ECA246G1540 Erigeron canadensis HOM05D006589 ORTHO05D008350 2.4e-250 869.0 572 71.9
CAN.G352.47 Capsicum annuum HOM05D006589 ORTHO05D008350 8.0e-246 854.0 555 76.4
Cc04_g10160 Coffea canephora HOM05D006589 ORTHO05D008350 1.4e-245 853.2 562 75.6
MBI08_g33782_MAGBIO Magnolia biondii HOM05D006589 ORTHO05D008350 2.3e-245 852.4 666 66.1
AUR62025863 Chenopodium quinoa HOM05D006589 ORTHO05D008350 2.7e-241 839.0 631 65.5
MELO3C026221.2 Cucumis melo HOM05D006589 ORTHO05D008350 6.5e-240 834.3 806 57.2
AUR62029828 Chenopodium quinoa HOM05D006589 ORTHO05D008350 4.7e-238 828.2 556 71.4
vmacro16654 Vaccinium macrocarpon HOM05D006589 ORTHO05D008350 1.7e-232 809.7 806 54.2
HPP92_003572 Vanilla planifolia HOM05D006589 ORTHO05D008350 2.9e-232 808.9 621 63.6
Ah.02g115320 Amaranthus hybridus HOM05D006589 ORTHO05D008350 2.6e-228 795.8 680 61.5
SGA_v2.0_scaffold161G37820 Striga asiatica HOM05D006589 ORTHO05D008350 2.7e-217 759.2 587 67.3
CiPaw.12G036500 Carya illinoinensis HOM05D006589 ORTHO05D008350 3.6e-214 748.8 470 79.6
Zm00001eb365570 Zea mays HOM05D006589 ORTHO05D008350 1.2e-206 723.8 602 59.3
vmacro16714 Vaccinium macrocarpon HOM05D006589 ORTHO05D008350 8.9e-189 664.5 784 48.5
Oeu006374.4 Olea europaea HOM05D006589 ORTHO05D000550 3.3e-167 592.8 425 68.7
unitig_0.g1070 Utricularia gibba HOM05D006589 ORTHO05D008350 2.1e-153 547.0 374 71.7
Os01g0901900 Oryza sativa ssp. japonica HOM05D006589 ORTHO05D008350 2.4e-141 506.9 422 58.5
Mapoly0120s0021 Marchantia polymorpha HOM05D006589 ORTHO05D008350 1.7e-131 474.2 519 49.5
ATR0060G001 Amborella trichopoda HOM05D006589 ORTHO05D008350 1.4e-120 438.0 353 65.2
Pp3c18_13570 Physcomitrium patens HOM05D006589 ORTHO05D008350 2.0e-116 424.1 557 44.5
Ca_15265_v3 Cicer arietinum L. HOM05D006589 ORTHO05D008350 3.7e-110 403.3 279 72.0
unitig_0.g1069 Utricularia gibba HOM05D006589 ORTHO05D008350 2.1e-97 360.9 285 63.5
FAN21G1369 Fragaria x ananassa HOM05D006589 ORTHO05D008350 1.8e-96 357.8 330 57.9
FAN21G3066 Fragaria x ananassa HOM05D006589 ORTHO05D008350 1.8e-96 357.8 330 57.9
SMO356G0597 Selaginella moellendorffii HOM05D006589 ORTHO05D008350 3.1e-88 330.5 554 37.5
RcHm_v2.0_Chr1g0380381 Rosa chinensis HOM05D006589 ORTHO05D008350 1.2e-81 308.5 252 63.5
ATR0686G112 Amborella trichopoda HOM05D006589 ORTHO05D008350 1.4e-77 295.0 274 55.1
CBR_g31403 Chara braunii HOM05D006589 ORTHO05D008350 7.6e-63 246.1 564 31.0
SEGI_40144 Sequoiadendron giganteum HOM05D006589 ORTHO05D008350 1.2e-55 222.2 292 42.1
HPP92_003575 Vanilla planifolia HOM05D006589 ORTHO05D008350 3.4e-55 220.7 218 53.2
FAN25G1587 Fragaria x ananassa HOM05D006589 ORTHO05D008350 2.1e-44 184.9 142 68.3
CDE09G0508 Ceratophyllum demersum HOM05D006589 ORTHO05D008350 4.8e-41 173.7 180 48.9
arahy.Tifrunner.gnm1.ann1.85RMBE Arachis hypogaea HOM05D006589 ORTHO05D008350 1.7e-33 148.7 142 57.0
arahy.Tifrunner.gnm1.ann1.Q1JBFY Arachis hypogaea HOM05D006589 ORTHO05D008350 3.1e-32 144.4 124 57.3
MCO14G318 Micromonas commoda HOM05D006589 ORTHO05D008350 3.7e-09 67.8 123 35.0
Cre07.g348500 Chlamydomonas reinhardtii HOM05D006589 ORTHO05D008350 1.6e-07 62.4 91 36.3
RcHm_v2.0_Chr1g0380361 Rosa chinensis HOM05D006589 ORTHO05D008350 8.5e-06 56.6 74 56.8


User provided reference genes

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