Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.013G004801 Populus trichocarpa HOM05D007256 ORTHO05D009109 2.9e-87 325.1 152 100.0
Sabra13G0003900 Salix brachista HOM05D007256 ORTHO05D009109 7.6e-80 300.4 152 93.4
Manes.08G108700 Manihot esculenta HOM05D007256 ORTHO05D009109 1.8e-52 209.5 160 65.0
GSVIVG01031300001 Vitis vinifera HOM05D007256 ORTHO05D009109 9.7e-51 203.8 159 62.3
Prupe.6G307100 Prunus persica HOM05D007256 ORTHO05D009109 1.1e-49 200.3 157 62.4
TWI12G0874 Tripterygium wilfordii HOM05D007256 ORTHO05D009109 2.4e-49 199.1 158 62.7
Haze_04019 Corylus avellana HOM05D007256 ORTHO05D009109 3.1e-49 198.7 157 62.4
QL03p009011 Quercus lobata HOM05D007256 ORTHO05D009109 1.2e-48 196.8 158 63.3
QL03p009202 Quercus lobata HOM05D007256 ORTHO05D009109 2.6e-48 195.7 158 62.7
Ciclev10012993m.g Citrus clementina HOM05D007256 ORTHO05D009109 3.8e-47 191.8 163 63.2
FAN09G0386 Fragaria x ananassa HOM05D007256 ORTHO05D009109 5.0e-47 191.4 157 59.9
RcHm_v2.0_Chr3g0458031 Rosa chinensis HOM05D007256 ORTHO05D009109 1.1e-46 190.3 157 59.2
Eucgr.B01795 Eucalyptus grandis HOM05D007256 ORTHO05D009109 1.4e-46 189.9 155 60.6
CANSAT54G0501 Cannabis sativa HOM05D007256 ORTHO05D009109 2.5e-46 189.1 158 60.8
Nn4g25434 Nelumbo nucifera HOM05D007256 ORTHO05D009109 7.2e-46 187.6 153 60.1
FAN02G0906 Fragaria x ananassa HOM05D007256 ORTHO05D009109 1.2e-45 186.8 157 59.2
ClCG03G017800 Citrullus lanatus HOM05D007256 ORTHO05D009109 3.6e-45 185.3 160 60.6
TAR362G0938 Trochodendron aralioides HOM05D007256 ORTHO05D009109 7.9e-45 184.1 159 58.5
QL03p009259 Quercus lobata HOM05D007256 ORTHO05D009109 1.0e-44 183.7 158 61.4
Atru.chr12.1603 Acer truncatum HOM05D007256 ORTHO05D009109 6.7e-44 181.0 183 53.6
CsaV3_1G037970 Cucumis sativus L. HOM05D007256 ORTHO05D009109 1.1e-43 180.3 160 54.4
CiPaw.07G034000 Carya illinoinensis HOM05D007256 ORTHO05D009109 1.5e-43 179.9 152 58.6
FvH4_6g08160 Fragaria vesca HOM05D007256 ORTHO05D009109 5.7e-43 177.9 152 57.9
Cfa006739 Carpinus fangiana HOM05D007256 ORTHO05D009109 1.7e-42 176.4 152 58.6
Duzib177G1002 Durio zibethinus HOM05D007256 ORTHO05D009109 2.8e-42 175.6 152 61.2
MSTRG.20366 Avicennia marina HOM05D007256 ORTHO05D009109 6.3e-42 174.5 160 56.2
MD12G1202300 Malus domestica HOM05D007256 ORTHO05D009109 1.1e-41 173.7 152 57.2
Oeu060662.1 Olea europaea HOM05D007256 ORTHO05D009109 1.2e-40 170.2 162 54.3
Gohir.A13G030200 Gossypium hirsutum HOM05D007256 ORTHO05D009109 1.6e-40 169.9 154 57.1
Thecc.05G327400 Theobroma cacao HOM05D007256 ORTHO05D009109 1.6e-40 169.9 152 59.9
FAN14G3866 Fragaria x ananassa HOM05D007256 ORTHO05D009109 3.5e-40 168.7 157 54.8
Duzib177G0019 Durio zibethinus HOM05D007256 ORTHO05D009109 4.5e-40 168.3 159 56.6
MELO3C015247.2 Cucumis melo HOM05D000487 ORTHO05D000405 1.0e-39 167.2 156 53.8
Gohir.D13G028200 Gossypium hirsutum HOM05D007256 ORTHO05D009109 2.2e-39 166.0 153 55.6
Gorai.013G032200 Gossypium raimondii HOM05D007256 ORTHO05D009109 2.2e-39 166.0 153 55.6
Nitab4.5_0002783g0030 Nicotiana tabacum HOM05D007256 ORTHO05D009109 3.8e-39 165.2 160 51.2
COL.COLO4_05498 Corchorus olitorius HOM05D007256 ORTHO05D009109 5.0e-39 164.9 152 55.3
Lsat_1_v5_gn_2_17440 Lactuca sativa HOM05D007256 ORTHO05D009109 6.5e-39 164.5 160 53.8
DCAR_002110 Daucus carota HOM05D007256 ORTHO05D009109 1.1e-38 163.7 156 56.4
Peaxi162Scf00357g00431 Petunia axillaris HOM05D007256 ORTHO05D009109 1.5e-38 163.3 160 52.5
PSO761G0366 Papaver somniferum HOM05D007256 ORTHO05D009109 2.5e-38 162.5 159 51.6
Solyc01g100990.3 Solanum lycopersicum HOM05D007256 ORTHO05D009109 2.5e-38 162.5 156 53.2
Cpa.g.sc48.207 Carica papaya HOM05D007256 ORTHO05D009109 3.2e-38 162.2 153 56.2
ECA238G0534 Erigeron canadensis HOM05D007256 ORTHO05D009109 4.2e-38 161.8 163 52.1
Sopen01g044450 Solanum pennellii HOM05D007256 ORTHO05D009109 4.2e-38 161.8 156 54.5
Hma1.2p1_0052F.1_g030520 Hydrangea macrophylla HOM05D007256 ORTHO05D009109 7.2e-38 161.0 155 53.5
CAN.G1374.8 Capsicum annuum HOM05D007256 ORTHO05D009109 9.4e-38 160.6 152 53.3
Nitab4.5_0005710g0050 Nicotiana tabacum HOM05D007256 ORTHO05D009109 1.2e-37 160.2 152 54.6
PGSC0003DMG400002748 Solanum tuberosum HOM05D007256 ORTHO05D009109 2.7e-37 159.1 152 53.3
BcaB04g19715 Brassica carinata HOM05D007256 ORTHO05D009109 6.1e-37 157.9 153 53.6
HanXRQChr14g0433581 Helianthus annuus HOM05D007256 ORTHO05D009109 8.0e-37 157.5 158 51.9
PSO210G0513 Papaver somniferum HOM05D007256 ORTHO05D009109 8.0e-37 157.5 160 50.6
AUR62006795 Chenopodium quinoa HOM05D007256 ORTHO05D009109 2.3e-36 156.0 155 53.5
SGA_v2.0_scaffold438G51636 Striga asiatica HOM05D007256 ORTHO05D009109 2.3e-36 156.0 153 52.9
A09p05700 Brassica napus HOM05D007256 ORTHO05D009109 3.0e-36 155.6 155 51.6
AL6G38610 Arabidopsis lyrata HOM05D007256 ORTHO05D009109 5.2e-36 154.8 152 53.9
SalBow7G1589 Salvia bowleyana HOM05D007256 ORTHO05D009109 8.8e-36 154.1 182 48.4
Aqoxy2G02591 Aquilegia oxysepala HOM05D007256 ORTHO05D009109 1.2e-35 153.7 152 52.6
Migut.B00859 Erythranthe guttata HOM05D007256 ORTHO05D009109 4.4e-35 151.8 162 52.5
Zm00001eb333750 Zea mays HOM05D007256 ORTHO05D009109 4.4e-35 151.8 169 49.1
Thhalv10005088m.g Eutrema salsugineum HOM05D007256 ORTHO05D009109 5.7e-35 151.4 153 53.6
EL10Ac4g09530 Beta vulgaris HOM05D007256 ORTHO05D009109 2.2e-34 149.4 152 52.6
BraA09t36210Z Brassica rapa HOM05D007256 ORTHO05D009109 3.7e-34 148.7 173 48.6
BcaC04g23634 Brassica carinata HOM05D007256 ORTHO05D009109 6.3e-34 147.9 154 50.0
C09p06290 Brassica napus HOM05D007256 ORTHO05D009109 6.3e-34 147.9 154 50.0
Cc02_g35540 Coffea canephora HOM05D007256 ORTHO05D009109 5.3e-33 144.8 159 48.4
Sed0013353 Sechium edule HOM05D007256 ORTHO05D009109 7.0e-33 144.4 157 51.6
Gorai.001G184000 Gossypium raimondii HOM05D007256 ORTHO05D009109 9.1e-33 144.1 152 51.3
AT5G26749 Arabidopsis thaliana HOM05D007256 ORTHO05D009109 2.0e-32 142.9 172 48.3
Aa31LG11G9900 Aethionema arabicum HOM05D007256 ORTHO05D009109 4.5e-32 141.7 153 51.6
Os01g0252200 Oryza sativa ssp. japonica HOM05D007256 ORTHO05D009109 4.5e-32 141.7 172 44.8
THA.LOC104821748 Tarenaya hassleriana HOM05D007256 ORTHO05D009109 7.7e-32 141.0 156 50.0
unitig_699.g19800 Utricularia gibba HOM05D007256 ORTHO05D009109 7.7e-32 141.0 180 47.2
Sp2g21240 Schrenkiella parvula HOM05D007256 ORTHO05D009109 1.7e-31 139.8 153 50.3
Hund07289 Selenicereus undatus HOM05D007256 ORTHO05D009109 2.2e-31 139.4 246 38.2
Lj5g0000046 Lotus japonicus HOM05D007256 ORTHO05D009109 3.8e-31 138.7 155 49.7
BolC9t53549H Brassica oleracea HOM05D007256 ORTHO05D009109 3.2e-30 135.6 171 45.6
CDE08G0276 Ceratophyllum demersum HOM05D007256 ORTHO05D009109 3.2e-30 135.6 152 48.0
arahy.Tifrunner.gnm1.ann1.Q851GZ Arachis hypogaea HOM05D007256 ORTHO05D009109 4.2e-30 135.2 154 44.8
arahy.Tifrunner.gnm1.ann1.H7RZSB Arachis hypogaea HOM05D007256 ORTHO05D009109 9.4e-30 134.0 154 45.5
HPP92_001218 Vanilla planifolia HOM05D007256 ORTHO05D009109 1.6e-29 133.3 152 48.7
Lalb_Chr02g0147641 Lupinus albus HOM05D007256 ORTHO05D009109 2.7e-29 132.5 148 45.9
FAN05G3272 Fragaria x ananassa HOM05D000487 ORTHO05D000405 4.7e-29 131.7 114 57.0
Ca_10190_v3 Cicer arietinum L. HOM05D007256 ORTHO05D009109 8.8e-28 127.5 152 46.1
VMungo0720G0365 Vigna mungo HOM05D007256 ORTHO05D009109 1.5e-27 126.7 152 47.4
TPR.G2616 Trifolium pratense HOM05D007256 ORTHO05D009109 2.6e-27 125.9 147 48.3
Phvul.007G203900 Phaseolus vulgaris HOM05D007256 ORTHO05D009109 3.4e-27 125.6 152 47.4
Glyma.10G144700 Glycine max HOM05D007256 ORTHO05D009109 9.8e-27 124.0 152 47.4
PGR042G2181 Punica granatum HOM05D007256 ORTHO05D009109 9.8e-27 124.0 104 58.7
SEGI_23053 Sequoiadendron giganteum HOM05D007256 ORTHO05D009109 1.3e-26 123.6 162 42.6
Medtr1g084750 Medicago truncatula HOM05D007256 ORTHO05D009109 2.2e-26 122.9 152 45.4
Psat1g134200 Pisum sativum HOM05D007256 ORTHO05D009109 1.1e-25 120.6 152 43.4
Sc09g0002500 Simmondsia chinensis HOM05D007256 ORTHO05D009109 1.3e-23 113.6 82 64.6
Carub.0006s2440 Capsella rubella HOM05D007256 ORTHO05D009109 3.8e-23 112.1 112 51.8
TPR.G2644 Trifolium pratense HOM05D007256 ORTHO05D009109 5.0e-23 111.7 152 44.1
ATR0693G354 Amborella trichopoda HOM05D007256 ORTHO05D009109 2.5e-22 109.4 123 48.0
Gohir.D01G139700 Gossypium hirsutum HOM05D007256 ORTHO05D009109 5.5e-22 108.2 123 48.0
Pp3c18_1910 Physcomitrium patens HOM05D007256 ORTHO05D009109 9.5e-22 107.5 154 42.9
Mapoly0054s0011 Marchantia polymorpha HOM05D007256 ORTHO05D009109 4.7e-21 105.1 156 38.5
vmacro19770 Vaccinium macrocarpon HOM05D007256 ORTHO05D009109 3.4e-19 99.0 241 32.8
Ah.10g027130 Amaranthus hybridus HOM05D007256 ORTHO05D009109 3.8e-15 85.5 69 59.4
Aqoxy4G00797 Aquilegia oxysepala HOM05D007256 ORTHO05D009109 1.5e-14 83.6 152 36.2
Rhsim05G0121300 Rhododendron simsii HOM05D007256 ORTHO05D009109 2.8e-13 79.3 70 54.3
SHI06526 Sapria himalayana HOM05D007256 ORTHO05D009109 8.9e-12 74.3 40 72.5
CARHR186830 Cardamine hirsuta HOM05D007256 ORTHO05D009109 4.4e-11 72.0 43 72.1
HPP92_001189 Vanilla planifolia HOM05D007256 ORTHO05D009109 8.3e-10 67.8 46 63.0
Nitab4.5_0000185g0380 Nicotiana tabacum HOM05D007256 ORTHO05D009109 9.2e-09 64.3 38 76.3
Gohir.D01G148000 Gossypium hirsutum HOM05D002544 ORTHO05D009109 1.0e-07 60.8 71 45.1


User provided reference genes

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