Gene: Potri.013G004801

General Information

Structural Information

  • Species Populus trichocarpa
  • Gene Identifier Potri.013G004801
  • Transcript Identifier Potri.013G004801.1
  • Gene Type Coding gene
  • Location Chr13 : 327974-329028 : positive

Gene Family Information

  • ID HOM05D007256
  • #Genes/#Species 108/88
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Potri.013G004801.v4.1
  • pacid 42811989

Descriptions

  • Description K13152 - U11/U12 small nuclear ribonucleoprotein 20 kDa protein (ZMAT5)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
InterPrometal ion binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0008270
IEA
InterProzinc ion binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G26749

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000571 Zinc finger, CCCH-type
IPR003604 Matrin/U1-C-like, C2H2-type zinc finger
IPR036855 Zinc finger, CCCH-type superfamily
IPR036236 Zinc finger C2H2 superfamily
IPR013085 U1-C, C2H2-type zinc finger
Mapman id Description
16.2.4.2.1 RNA processing.pre-mRNA splicing.U12-type-intron-specific minor spliceosome.U11/U12 small nuclear ribonucleoprotein particle (snRNP).protein factor (U11/U12-20K)