Gene: Cc02_g35540

General Information

Structural Information

Species Coffea canephora
Gene Identifier Cc02_g35540
Transcript Identifier Cc02_g35540.1
Gene Type Coding gene
Location chr2 : 49381221-49383357 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D007256
#Genes/#Species 108/88
Phylogenetic origin

ID ORTHO05D009109
#Genes/#Species 109/88
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

UniProtKB I1HDY3
UniProtKB Q2TA39
UniProtKB C5XFS5
UniProtKB Q6AXL8
UniProtKB D7UA82
UniProtKB Q0JP11
id GSCOCG00042833001

Descriptions

Short descriptions
Ortholog descriptions

Description Putative Zinc finger CCCH domain-containing protein 3

Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0046872	IEA	InterPro	metal ion binding
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0008270	IEA	InterPro	zinc ion binding
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT5G26749

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR000571	Zinc finger, CCCH-type
IPR036855	Zinc finger, CCCH-type superfamily
IPR003604	Matrin/U1-C-like, C2H2-type zinc finger
IPR036236	Zinc finger C2H2 superfamily
IPR013085	U1-C, C2H2-type zinc finger

Mapman id	Description
16.2.4.2.1	RNA processing.pre-mRNA splicing.U12-type-intron-specific minor spliceosome.U11/U12 small nuclear ribonucleoprotein particle (snRNP).protein factor (U11/U12-20K)