Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.012G145100 Populus trichocarpa HOM05D003126 ORTHO05D010530 4.8e-216 754.2 378 100.0
TAR383G0388 Trochodendron aralioides HOM05D003126 ORTHO05D010530 1.1e-47 194.9 390 38.5
Dinv37482 Davidia involucrata HOM05D002037 ORTHO05D005261 2.5e-47 193.7 364 39.8
Actinidia25729 Actinidia chinensis HOM05D003126 ORTHO05D010530 3.3e-39 166.8 393 37.2
Prupe.3G017800 Prunus persica HOM05D003126 ORTHO05D010530 3.1e-37 160.2 384 35.9
RcHm_v2.0_Chr2g0150031 Rosa chinensis HOM05D003126 ORTHO05D010530 1.2e-36 158.3 387 34.6
MD17G1145400 Malus domestica HOM05D003126 ORTHO05D010530 1.5e-36 157.9 391 34.8
Rhsim03G0058300 Rhododendron simsii HOM05D003126 ORTHO05D010530 4.9e-35 152.9 392 36.5
Atru.chr7.2706 Acer truncatum HOM05D003126 ORTHO05D010530 1.4e-34 151.4 389 35.5
Cfa017786 Carpinus fangiana HOM05D003126 ORTHO05D010530 4.1e-34 149.8 366 34.2
Hma1.2p1_1382F.1_g279410 Hydrangea macrophylla HOM05D003126 ORTHO05D010530 5.4e-34 149.4 382 36.9
Haze_18439 Corylus avellana HOM05D003126 ORTHO05D010530 1.6e-30 137.9 366 33.1
FAN09G1633 Fragaria x ananassa HOM05D003126 ORTHO05D010530 4.7e-30 136.3 387 32.3
QL06p053594 Quercus lobata HOM05D003126 ORTHO05D010530 4.0e-29 133.3 364 32.1
FvH4_6g37250 Fragaria vesca HOM05D003126 ORTHO05D010530 2.0e-28 131.0 389 32.9
vmacro07518 Vaccinium macrocarpon HOM05D003126 ORTHO05D010530 9.9e-28 128.6 352 34.4
FAN14G4997 Fragaria x ananassa HOM05D003126 ORTHO05D010530 2.9e-27 127.1 384 33.6
Hund19380 Selenicereus undatus HOM05D003126 ORTHO05D010530 1.9e-26 124.4 336 33.3
GSVIVG01035585001 Vitis vinifera HOM05D003126 ORTHO05D010530 4.1e-26 123.2 346 30.9
PSO063G2008 Papaver somniferum HOM05D003126 ORTHO05D010530 2.7e-25 120.6 327 34.6
Nn8g41232 Nelumbo nucifera HOM05D003126 ORTHO05D010530 1.7e-24 117.9 324 32.1
CANSAT01G1393 Cannabis sativa HOM05D003126 ORTHO05D010530 3.9e-24 116.7 362 31.5
CSS0018782 Camellia sinensis var. sinensis HOM05D003126 ORTHO05D010530 6.6e-24 115.9 178 46.1
Aqoxy7G02661 Aquilegia oxysepala HOM05D003126 ORTHO05D010530 8.1e-22 109.0 350 30.9
PSO170G0504 Papaver somniferum HOM05D003126 ORTHO05D010530 1.8e-21 107.8 288 33.7
MBI16_g00828_MAGBIO Magnolia biondii HOM05D003126 ORTHO05D010530 5.2e-21 106.3 307 31.3
CiPaw.16G077500 Carya illinoinensis HOM05D003126 ORTHO05D010530 5.8e-20 102.8 101 56.4
CDE07G0165 Ceratophyllum demersum HOM05D003126 ORTHO05D010530 1.0e-16 92.0 319 27.6
Carub.0004s0368 Capsella rubella HOM05D003126 ORTHO05D010530 1.3e-16 91.7 296 28.7
CARHR117720 Cardamine hirsuta HOM05D003126 ORTHO05D010530 1.9e-15 87.8 375 26.1
AUR62020663 Chenopodium quinoa HOM05D003126 ORTHO05D010530 2.5e-15 87.4 315 31.1
Haze_18443 Corylus avellana HOM05D009546 ORTHO05D014580 3.6e-14 83.6 104 44.2
AT2G24350 Arabidopsis thaliana HOM05D003126 ORTHO05D010530 6.2e-14 82.8 371 27.2
AL4G14744 Arabidopsis lyrata HOM05D003126 ORTHO05D010530 1.8e-13 81.3 381 26.2
HPP92_010335 Vanilla planifolia HOM05D003126 ORTHO05D010530 2.0e-12 77.8 77 55.8
ATR0626G022 Amborella trichopoda HOM05D003126 ORTHO05D010530 2.6e-12 77.4 117 40.2
Aa31LG7G12400 Aethionema arabicum HOM05D003126 ORTHO05D010530 4.4e-12 76.6 190 34.7
Os04g0306800 Oryza sativa ssp. japonica HOM05D003126 ORTHO05D005034 5.8e-12 76.3 367 27.5
AUR62028067 Chenopodium quinoa HOM05D003126 ORTHO05D010530 4.9e-11 73.2 41 80.5
Duzib168G1775 Durio zibethinus HOM05D003126 ORTHO05D010530 6.4e-11 72.8 103 45.6
Thhalv10000139m.g Eutrema salsugineum HOM05D003126 ORTHO05D010530 9.3e-10 68.9 87 48.3
SMO116G0171 Selaginella moellendorffii HOM05D003126 ORTHO05D005034 9.3e-10 68.9 121 42.1
Gohir.A05G008200 Gossypium hirsutum HOM05D003126 ORTHO05D010530 2.1e-09 67.8 94 44.7
Mapoly0177s0019 Marchantia polymorpha HOM05D003126 ORTHO05D005034 2.7e-09 67.4 82 48.8
SEGI_13274 Sequoiadendron giganteum HOM05D003126 ORTHO05D005034 7.8e-09 65.9 72 47.2
Thecc.09G153400 Theobroma cacao HOM05D003126 ORTHO05D010530 7.8e-09 65.9 191 30.4
Gorai.009G009200 Gossypium raimondii HOM05D003126 ORTHO05D010530 1.0e-08 65.5 92 43.5
AagrBONN_evm.TU.Sc2ySwM_117.3410 Anthoceros agrestis HOM05D003126 ORTHO05D005034 1.7e-08 64.7 81 48.1
BraA04t17475Z Brassica rapa HOM05D003126 ORTHO05D010530 1.7e-08 64.7 82 45.1
Sp4g03350 Schrenkiella parvula HOM05D003126 ORTHO05D010530 3.9e-08 63.5 142 33.1
VMungo1080G1220 Vigna mungo HOM05D003126 ORTHO05D005034 6.6e-08 62.8 106 36.8
Ca_14367_v3 Cicer arietinum L. HOM05D003126 ORTHO05D005034 1.9e-07 61.2 80 42.5
Phvul.005G036300 Phaseolus vulgaris HOM05D003126 ORTHO05D005034 1.9e-07 61.2 82 42.7
Glyma.15G272900 Glycine max HOM05D003126 ORTHO05D005034 5.6e-07 59.7 98 36.7
CSS0022881 Camellia sinensis var. sinensis HOM05D003126 ORTHO05D010530 7.3e-07 59.3 137 36.5
Lj3g0014064 Lotus japonicus HOM05D003126 ORTHO05D005034 9.6e-07 58.9 83 39.8
Medtr3g028140 Medicago truncatula HOM05D003126 ORTHO05D005034 9.6e-07 58.9 89 36.0
Pp3c10_12150 Physcomitrium patens HOM05D003126 ORTHO05D005034 9.6e-07 58.9 94 36.2
HanXRQChr06g0185401 Helianthus annuus HOM05D003126 ORTHO05D005034 1.3e-06 58.5 103 35.9
Sabra12G0109000 Salix brachista HOM05D009546 ORTHO05D014580 1.3e-06 58.5 35 82.9
SGA_v2.0_scaffold4G02256 Striga asiatica HOM05D003126 ORTHO05D005034 1.3e-06 58.5 149 31.5
TPR.G12288 Trifolium pratense HOM05D003126 ORTHO05D005034 1.3e-06 58.5 64 43.8
COL.COLO4_23919 Corchorus olitorius HOM05D003126 ORTHO05D005034 1.6e-06 58.2 130 31.5
Glyma.08G153100 Glycine max HOM05D003126 ORTHO05D005034 2.1e-06 57.8 299 23.4
Lalb_Chr25g0283141 Lupinus albus HOM05D003126 ORTHO05D005034 2.1e-06 57.8 139 28.8
CBR_g472 Chara braunii HOM05D003126 ORTHO05D001316 3.6e-06 57.0 92 43.5
Pp3c3_23400 Physcomitrium patens HOM05D003126 ORTHO05D005034 3.6e-06 57.0 71 42.3
Dinv43458 Davidia involucrata HOM05D003126 ORTHO05D005034 4.8e-06 56.6 110 34.5
Eucgr.J01261 Eucalyptus grandis HOM05D003126 ORTHO05D005034 4.8e-06 56.6 101 33.7
Manes.10G145600 Manihot esculenta HOM05D003126 ORTHO05D005034 4.8e-06 56.6 80 37.5
Potri.009G063800 Populus trichocarpa HOM05D003126 ORTHO05D005034 4.8e-06 56.6 64 43.8
Aa31LG3G10 Aethionema arabicum HOM05D003126 ORTHO05D005034 6.2e-06 56.2 115 32.2
Aqoxy1G00215 Aquilegia oxysepala HOM05D003126 ORTHO05D005034 6.2e-06 56.2 83 37.3
Sabra16G0164800 Salix brachista HOM05D003126 ORTHO05D005034 6.2e-06 56.2 73 39.7
Nitab4.5_0000634g0050 Nicotiana tabacum HOM05D003126 ORTHO05D005034 8.1e-06 55.8 101 34.7
Potri.001G269200 Populus trichocarpa HOM05D003126 ORTHO05D005034 8.1e-06 55.8 64 43.8


User provided reference genes

Program Settings