Gene: AT2G24350

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G24350
  • Transcript Identifier AT2G24350.1
  • Gene Type Coding gene
  • Location Chr2 : 10361239-10364223 : positive

Gene Family Information

  • ID HOM05D003126
  • #Genes/#Species 219/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G24350.1
  • uniprot Q0WPW8

Descriptions

  • Description RNA binding (RRM/RBD/RNP motifs) family protein
  • Computational description RNA binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G12640.1); Has 1250 Blast hits to 1230 proteins in 225 species: Archae - 0; Bacteria - 16; Metazoa - 421; Fungi - 338; Plants - 301; Viruses - 0; Other Eukaryotes - 174 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006397
ISO
PLAZA Homology (enrichment)mRNA processing HOM05D003126
GO:1900364
IBA
IEA
Gene Ontologynegative regulation of mRNA polyadenylation1
GO:1900364
IEA
InterPronegative regulation of mRNA polyadenylation
GO:0043488
IBA
IEA
Gene Ontologyregulation of mRNA stability1
GO:0043488
IEA
InterProregulation of mRNA stability

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0008143
IBA
IEA
Gene Ontologypoly(A) binding1
GO:0008143
IEA
InterPropoly(A) binding
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM, IBA
Gene Ontologynucleus1
GO:0005737
IBA
Gene Ontologycytoplasm1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR040366 Nuclear polyadenylated RNA-binding protein Nab2/ZC3H14
IPR000504 RNA recognition motif domain
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 RNA-binding domain superfamily
Mapman id Description
35.1 not assigned.annotated