Gene: Thhalv10000139m.g

General Information

Structural Information

  • Species Eutrema salsugineum
  • Gene Identifier Thhalv10000139m.g
  • Transcript Identifier Thhalv10000139m
  • Gene Type Coding gene
  • Location scaffold_15 : 3065624-3068368 : positive

Gene Family Information

  • ID HOM05D003126
  • #Genes/#Species 219/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Thhalv10000139m.g.v1.0
  • pacid 20208317

Descriptions

  • Description PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043488
IEA
InterProregulation of mRNA stability
GO:1900364
IEA
InterPronegative regulation of mRNA polyadenylation
GO:0006397
ISO
PLAZA Homology (enrichment)mRNA processing HOM05D003126

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008143
IEA
InterPropoly(A) binding
GO:0003676
IEA
InterPronucleic acid binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR040366 Nuclear polyadenylated RNA-binding protein Nab2/ZC3H14
IPR000504 RNA recognition motif domain
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 RNA-binding domain superfamily
Mapman id Description
35.1 not assigned.annotated