Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.012G091800 Populus trichocarpa HOM05D007098 ORTHO05D008793 3.8e-246 855.1 720 100.0
Sabra12G0066500 Salix brachista HOM05D007098 ORTHO05D008793 5.7e-202 708.4 721 90.8
Manes.06G113500 Manihot esculenta HOM05D007098 ORTHO05D008793 3.1e-139 500.0 726 72.5
QL10p005624 Quercus lobata HOM05D007098 ORTHO05D008793 3.3e-125 453.4 624 81.6
Hma1.2p1_0014F.1_g009950 Hydrangea macrophylla HOM05D007098 ORTHO05D008793 7.4e-125 452.2 634 81.2
Haze_07291 Corylus avellana HOM05D007098 ORTHO05D008793 1.8e-123 447.6 728 73.8
Thecc.03G120500 Theobroma cacao HOM05D007098 ORTHO05D008793 6.9e-123 445.7 735 71.0
Dinv11119 Davidia involucrata HOM05D002040 ORTHO05D002502 2.0e-122 444.1 696 73.6
ClCG03G003340 Citrullus lanatus HOM05D007098 ORTHO05D008793 2.2e-121 440.7 677 75.8
FAN13G2898 Fragaria x ananassa HOM05D007098 ORTHO05D008793 5.0e-121 439.5 723 74.0
CiPaw.11G013600 Carya illinoinensis HOM05D007098 ORTHO05D008793 2.1e-119 434.1 625 80.3
TWI39G0887 Tripterygium wilfordii HOM05D007098 ORTHO05D008793 2.7e-119 433.7 637 77.2
Gorai.001G062100 Gossypium raimondii HOM05D007098 ORTHO05D008793 3.9e-118 429.9 737 71.0
Gohir.A07G054300 Gossypium hirsutum HOM05D007098 ORTHO05D008793 6.7e-118 429.1 737 71.1
Gohir.D07G058600 Gossypium hirsutum HOM05D007098 ORTHO05D008793 8.8e-118 428.7 737 70.8
MD06G1160200 Malus domestica HOM05D007098 ORTHO05D008793 8.8e-118 428.7 719 73.0
Sed0010608 Sechium edule HOM05D007098 ORTHO05D008793 1.1e-117 428.3 624 79.6
FAN18G2243 Fragaria x ananassa HOM05D007098 ORTHO05D008793 9.7e-117 425.2 622 80.5
FvH4_5g07010 Fragaria vesca HOM05D007098 ORTHO05D008793 1.3e-116 424.9 622 80.9
Cpa.g.sc4.42 Carica papaya HOM05D007098 ORTHO05D008793 3.7e-116 423.3 619 79.3
EL10Ac7g18049 Beta vulgaris HOM05D007098 ORTHO05D008793 1.1e-115 421.8 726 71.3
RcHm_v2.0_Chr7g0191671 Rosa chinensis HOM05D007098 ORTHO05D008793 1.1e-115 421.8 726 72.5
Atru.chr9.986 Acer truncatum HOM05D007098 ORTHO05D008793 1.4e-115 421.4 728 71.3
CsaV3_1G009150 Cucumis sativus L. HOM05D007098 ORTHO05D008793 5.3e-115 419.5 632 74.5
FAN04G0983 Fragaria x ananassa HOM05D007098 ORTHO05D008793 3.5e-114 416.8 621 69.7
Ciclev10019054m.g Citrus clementina HOM05D007098 ORTHO05D008793 1.3e-113 414.8 712 71.6
Cfa018906 Carpinus fangiana HOM05D007098 ORTHO05D008793 4.2e-112 409.8 556 86.0
THA.LOC104824999 Tarenaya hassleriana HOM05D007098 ORTHO05D008793 1.8e-110 404.4 696 68.8
Cc04_g10690 Coffea canephora HOM05D007098 ORTHO05D008793 5.2e-110 402.9 724 71.0
Prupe.5G160200 Prunus persica HOM05D007098 ORTHO05D008793 3.3e-109 400.2 734 70.4
Ah.08g218330 Amaranthus hybridus HOM05D007098 ORTHO05D008793 1.4e-107 394.8 691 71.5
Duzib205G2031 Durio zibethinus HOM05D007098 ORTHO05D008793 5.3e-107 392.9 727 69.1
Carub.0008s1032 Capsella rubella HOM05D007098 ORTHO05D008793 2.6e-106 390.6 730 69.0
MELO3C002322.2 Cucumis melo HOM05D007098 ORTHO05D008793 2.6e-106 390.6 719 69.1
Nn5g28372 Nelumbo nucifera HOM05D007098 ORTHO05D008793 6.5e-105 386.0 616 77.6
HanXRQChr09g0272771 Helianthus annuus HOM05D007098 ORTHO05D008793 1.9e-104 384.4 736 65.9
GSVIVG01007576001 Vitis vinifera HOM05D007098 ORTHO05D008793 1.9e-104 384.4 702 71.8
Lj2g0008135 Lotus japonicus HOM05D007098 ORTHO05D008793 2.5e-104 384.0 626 76.2
CANSAT80G2237 Cannabis sativa HOM05D007098 ORTHO05D008793 8.8e-102 375.6 628 76.1
MBI11_g46348_MAGBIO Magnolia biondii HOM05D007098 ORTHO05D008793 2.6e-101 374.0 714 68.8
AT5G50280 Arabidopsis thaliana HOM05D007098 ORTHO05D008793 5.7e-101 372.9 724 68.4
MSTRG.9703 Avicennia marina HOM05D007098 ORTHO05D008793 1.7e-100 371.3 730 67.0
Phvul.011G039200 Phaseolus vulgaris HOM05D007098 ORTHO05D008793 3.7e-100 370.2 701 69.3
arahy.Tifrunner.gnm1.ann1.RHK9HC Arachis hypogaea HOM05D007098 ORTHO05D008793 1.8e-99 367.9 719 68.8
Aa31LG3G5960 Aethionema arabicum HOM05D007098 ORTHO05D008793 2.4e-99 367.5 734 67.3
Actinidia16202 Actinidia chinensis HOM05D007098 ORTHO05D008793 7.0e-99 365.9 700 68.3
PGSC0003DMG400015232 Solanum tuberosum HOM05D007098 ORTHO05D008793 1.6e-98 364.8 628 73.2
Thhalv10012796m.g Eutrema salsugineum HOM05D007098 ORTHO05D008793 2.0e-98 364.4 621 74.9
arahy.Tifrunner.gnm1.ann1.PW5CDL Arachis hypogaea HOM05D007098 ORTHO05D008793 2.7e-98 364.0 718 68.7
TAR371G0113 Trochodendron aralioides HOM05D007098 ORTHO05D008793 2.7e-98 364.0 721 68.2
BraA03t11986Z Brassica rapa HOM05D007098 ORTHO05D008793 3.5e-98 363.6 612 70.1
AL8G24320 Arabidopsis lyrata HOM05D007098 ORTHO05D008793 5.9e-98 362.8 728 66.9
AUR62025750 Chenopodium quinoa HOM05D007098 ORTHO05D008793 5.9e-98 362.8 627 73.8
Peaxi162Scf00089g00927 Petunia axillaris HOM05D007098 ORTHO05D008793 1.0e-97 362.1 620 75.8
SGA_v2.0_scaffold45G17096 Striga asiatica HOM05D006560 ORTHO05D008164 1.0e-97 362.1 626 68.5
CARHR258300 Cardamine hirsuta HOM05D007098 ORTHO05D008793 1.3e-97 361.7 631 72.7
Sp6g12370 Schrenkiella parvula HOM05D007098 ORTHO05D008793 1.3e-97 361.7 616 74.8
Glyma.11G111200 Glycine max HOM05D007098 ORTHO05D008793 2.2e-97 360.9 701 69.2
CSS0030055 Camellia sinensis var. sinensis HOM05D007098 ORTHO05D008793 1.9e-96 357.8 324 58.3
CSS0038177 Camellia sinensis var. sinensis HOM05D007098 ORTHO05D008793 1.9e-96 357.8 630 72.5
Glyma.12G037500 Glycine max HOM05D007098 ORTHO05D008793 2.5e-96 357.5 694 69.2
AUR62001258 Chenopodium quinoa HOM05D007098 ORTHO05D008793 3.2e-96 357.1 634 74.0
Rhsim08G0182900 Rhododendron simsii HOM05D007098 ORTHO05D008793 4.2e-96 356.7 552 80.1
Lalb_Chr10g0098821 Lupinus albus HOM05D007098 ORTHO05D008793 5.5e-96 356.3 631 73.4
BolC3t15668H Brassica oleracea HOM05D007098 ORTHO05D008793 2.1e-95 354.4 705 63.7
BcaC01g04822 Brassica carinata HOM05D007098 ORTHO05D008793 2.7e-95 354.0 705 64.3
BcaB01g02904 Brassica carinata HOM05D007098 ORTHO05D008793 4.7e-95 353.2 719 62.7
C03p33470 Brassica napus HOM05D007098 ORTHO05D008793 1.4e-94 351.7 706 64.2
A03p27750 Brassica napus HOM05D007098 ORTHO05D008793 1.8e-94 351.3 705 63.5
vmacro19257 Vaccinium macrocarpon HOM05D007098 ORTHO05D008793 4.0e-94 350.1 624 71.6
Nitab4.5_0006717g0020 Nicotiana tabacum HOM05D007098 ORTHO05D008793 2.6e-93 347.4 704 69.3
PSO063G4104 Papaver somniferum HOM05D007098 ORTHO05D008793 2.6e-93 347.4 717 68.1
Dinv38489 Davidia involucrata HOM05D007098 ORTHO05D008793 2.2e-92 344.4 417 72.4
PSO782G3618 Papaver somniferum HOM05D007098 ORTHO05D008793 2.2e-92 344.4 727 67.4
Psat2g130240 Pisum sativum HOM05D007098 ORTHO05D008793 5.4e-91 339.7 639 72.3
TPR.G24468 Trifolium pratense HOM05D007098 ORTHO05D008793 3.5e-90 337.0 611 74.3
Nitab4.5_0001360g0150 Nicotiana tabacum HOM05D007098 ORTHO05D008793 7.7e-90 335.9 627 73.7
Sopen03g030770 Solanum pennellii HOM05D007098 ORTHO05D008793 2.3e-89 334.3 685 68.6
Medtr5g045490 Medicago truncatula HOM05D007098 ORTHO05D008793 4.2e-88 330.1 621 73.9
SalBow1G0423 Salvia bowleyana HOM05D007098 ORTHO05D008793 1.0e-86 325.5 722 59.8
Lsat_1_v5_gn_4_78280 Lactuca sativa HOM05D007098 ORTHO05D008793 4.0e-86 323.6 646 66.9
Eucgr.B00165 Eucalyptus grandis HOM05D007098 ORTHO05D008793 2.0e-85 321.2 505 85.7
Migut.D02039 Erythranthe guttata HOM05D007098 ORTHO05D008793 4.4e-85 320.1 723 64.6
Glyma.02G116500 Glycine max HOM05D007098 ORTHO05D008793 1.1e-83 315.5 615 72.5
VMungo1127G2011 Vigna mungo HOM05D007098 ORTHO05D008793 2.4e-83 314.3 620 71.6
CDE09G0597 Ceratophyllum demersum HOM05D007098 ORTHO05D008793 9.2e-83 312.4 325 51.7
ECA232G2468 Erigeron canadensis HOM05D001195 ORTHO05D001138 1.6e-82 311.6 561 71.3
Solyc03g111650.4 Solanum lycopersicum HOM05D007098 ORTHO05D008793 7.8e-82 309.3 685 52.8
Sc22g0003940 Simmondsia chinensis HOM05D007098 ORTHO05D008793 2.1e-79 301.2 675 66.7
Lj5A101T108 Lonicera japonica HOM05D007098 ORTHO05D008793 8.9e-78 295.8 198 69.2
ATR0824G168 Amborella trichopoda HOM05D007098 ORTHO05D008793 1.2e-77 295.4 730 63.2
arahy.Tifrunner.gnm1.ann1.L7HRZC Arachis hypogaea HOM05D007098 ORTHO05D008793 3.4e-77 293.9 373 47.7
Hund21512 Selenicereus undatus HOM05D007098 ORTHO05D008793 1.3e-76 292.0 620 71.1
Phvul.003G042600 Phaseolus vulgaris HOM05D007098 ORTHO05D008793 3.3e-72 277.3 688 65.0
VMungo1215G0824 Vigna mungo HOM05D007098 ORTHO05D008793 8.9e-70 269.2 338 46.2
Ca_04973_v3 Cicer arietinum L. HOM05D007098 ORTHO05D008793 4.1e-67 260.4 398 68.1
CAN.G472.49 Capsicum annuum HOM05D007098 ORTHO05D008793 1.3e-57 228.8 489 80.6
HPP92_024236 Vanilla planifolia HOM05D007098 ORTHO05D008793 2.1e-55 221.5 504 75.2
Glyma.01G059100 Glycine max HOM05D007098 ORTHO05D008793 5.8e-53 213.4 504 77.4
SEGI_05165 Sequoiadendron giganteum HOM05D007098 ORTHO05D008793 7.8e-50 203.0 334 61.4
Os05g0294600 Oryza sativa ssp. japonica HOM05D007098 ORTHO05D008793 1.3e-47 195.7 543 66.9
Cpa.g.sc4.27 Carica papaya HOM05D006000 ORTHO05D008793 9.9e-37 159.5 120 62.5
Ca_26530_v3 Cicer arietinum L. HOM05D005706 ORTHO05D008793 2.1e-34 151.8 264 78.0
DCAR_021600 Daucus carota HOM05D007098 ORTHO05D008793 3.2e-27 127.9 80 77.5
Duzib084G0201 Durio zibethinus HOM05D007098 ORTHO05D008793 3.2e-27 127.9 86 72.1
Pp3c3_19290 Physcomitrium patens HOM05D007098 ORTHO05D008793 7.9e-26 123.2 311 26.7
Lj5C101T15 Lonicera japonica HOM05D007098 ORTHO05D008793 1.3e-25 122.5 77 79.2
Mapoly0023s0082 Marchantia polymorpha HOM05D007098 ORTHO05D008793 3.9e-25 120.9 308 28.6
Ca_30971_v3 Cicer arietinum L. HOM05D007098 ORTHO05D008793 1.6e-23 115.5 178 41.6
Hma1.2p1_0014F.1_g009960 Hydrangea macrophylla HOM05D007098 ORTHO05D008793 3.7e-23 114.4 66 87.9
AagrBONN_evm.TU.Sc2ySwM_228.5130 Anthoceros agrestis HOM05D007098 ORTHO05D008793 2.4e-22 111.7 205 28.8
MBI11_g46065_MAGBIO Magnolia biondii HOM05D007098 ORTHO05D008793 2.6e-21 108.2 74 75.7
Zm00001eb154110 Zea mays HOM05D007098 ORTHO05D008793 7.4e-16 90.1 76 60.5
PGR083G1300 Punica granatum HOM05D005390 ORTHO05D007086 2.2e-12 78.6 168 38.7
arahy.Tifrunner.gnm1.ann1.0Z4KK5 Arachis hypogaea HOM05D007098 ORTHO05D008793 1.9e-11 75.5 56 67.9
ClCG03G003360 Citrullus lanatus HOM05D007098 ORTHO05D008793 1.0e-09 69.7 48 70.8
AL3G52990 Arabidopsis lyrata HOM05D003056 ORTHO05D003422 1.3e-07 62.8 178 23.6
AT2G18940 Arabidopsis thaliana HOM05D003056 ORTHO05D003422 3.7e-07 61.2 161 24.2
CARHR109480 Cardamine hirsuta HOM05D003056 ORTHO05D003422 1.4e-06 59.3 142 26.8
Carub.0003s3317 Capsella rubella HOM05D003056 ORTHO05D003422 1.8e-06 58.9 144 25.7
ECA240G0024 Erigeron canadensis HOM05D003056 ORTHO05D003422 1.8e-06 58.9 121 24.8
SpUn0483_0010 Schrenkiella parvula HOM05D003056 ORTHO05D003422 3.1e-06 58.2 142 26.8
Ciclev10007460m.g Citrus clementina HOM05D003056 ORTHO05D003422 6.9e-06 57.0 179 22.3
Cc03_g16010 Coffea canephora HOM05D000001 ORTHO05D009766 6.9e-06 57.0 122 26.2
Hma1.2p1_1303F.1_g274420 Hydrangea macrophylla HOM05D003056 ORTHO05D003422 6.9e-06 57.0 166 25.3


User provided reference genes

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