Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.012G009001 Populus trichocarpa HOM05D005740 ORTHO05D007085 9.7e-77 290.0 143 100.0
Potri.012G026375 Populus trichocarpa HOM05D005740 ORTHO05D007085 1.7e-60 236.1 118 98.3
Potri.012G005800 Populus trichocarpa HOM05D005740 ORTHO05D007085 5.4e-43 177.9 118 76.3
Manes.05G197600 Manihot esculenta HOM05D005740 ORTHO05D007085 9.1e-43 177.2 118 73.7
Potri.015G002200 Populus trichocarpa HOM05D005740 ORTHO05D007085 2.0e-42 176.0 119 76.5
Ciclev10021260m.g Citrus clementina HOM05D005740 ORTHO05D007085 2.7e-42 175.6 118 73.7
Sabra15G0001400 Salix brachista HOM05D005740 ORTHO05D007085 2.9e-41 172.2 118 73.7
Nn3g18795 Nelumbo nucifera HOM05D005740 ORTHO05D007085 1.1e-40 170.2 118 69.5
PGR042G0341 Punica granatum HOM05D005740 ORTHO05D007085 1.5e-40 169.9 118 72.9
TWI23G0506 Tripterygium wilfordii HOM05D005740 ORTHO05D007085 2.5e-40 169.1 127 72.4
COL.COLO4_14370 Corchorus olitorius HOM05D005740 ORTHO05D007085 3.6e-39 165.2 118 68.6
ClCG02G000010 Citrullus lanatus HOM05D005740 ORTHO05D007085 8.0e-39 164.1 118 68.6
GSVIVG01038643001 Vitis vinifera HOM05D005740 ORTHO05D007085 1.0e-38 163.7 118 67.8
Cpa.g.sc3.153 Carica papaya HOM05D005740 ORTHO05D007085 1.4e-38 163.3 123 69.1
CDE05G3242 Ceratophyllum demersum HOM05D005740 ORTHO05D007085 4.0e-38 161.8 131 62.6
Eucgr.A01406 Eucalyptus grandis HOM05D005740 ORTHO05D007085 5.2e-38 161.4 120 70.0
Glyma.06G136500 Glycine max HOM05D005740 ORTHO05D007085 8.9e-38 160.6 118 67.8
Glyma.04G228400 Glycine max HOM05D005740 ORTHO05D007085 1.2e-37 160.2 118 67.8
Gohir.A08G104500 Gossypium hirsutum HOM05D005740 ORTHO05D007085 1.2e-37 160.2 136 61.0
MELO3C023190.2 Cucumis melo HOM05D005740 ORTHO05D007085 2.6e-37 159.1 129 62.8
CsaV3_2G019690 Cucumis sativus L. HOM05D005740 ORTHO05D007085 3.4e-37 158.7 118 66.1
MD07G1298900 Malus domestica HOM05D005740 ORTHO05D007085 3.4e-37 158.7 120 66.7
Phvul.009G045100 Phaseolus vulgaris HOM05D005740 ORTHO05D007085 3.4e-37 158.7 118 66.9
Thecc.03G208700 Theobroma cacao HOM05D005740 ORTHO05D007085 3.4e-37 158.7 128 64.8
CiPaw.05G205100 Carya illinoinensis HOM05D005740 ORTHO05D007085 4.4e-37 158.3 123 65.0
arahy.Tifrunner.gnm1.ann1.2GB72X Arachis hypogaea HOM05D005740 ORTHO05D007085 7.5e-37 157.5 118 68.6
CDE02G4511 Ceratophyllum demersum HOM05D005740 ORTHO05D007085 7.5e-37 157.5 131 61.8
Haze_00297 Corylus avellana HOM05D005740 ORTHO05D007085 7.5e-37 157.5 134 62.7
Gohir.D08G116100 Gossypium hirsutum HOM05D005740 ORTHO05D007085 1.3e-36 156.8 131 61.8
Gorai.004G125000 Gossypium raimondii HOM05D005740 ORTHO05D007085 1.3e-36 156.8 131 61.8
VMungo1309G0132 Vigna mungo HOM05D005740 ORTHO05D007085 1.3e-36 156.8 118 66.9
Cfa016160 Carpinus fangiana HOM05D005740 ORTHO05D007085 1.7e-36 156.4 134 62.7
Sed0000166 Sechium edule HOM05D005740 ORTHO05D007085 1.7e-36 156.4 120 65.8
arahy.Tifrunner.gnm1.ann1.88XX4I Arachis hypogaea HOM05D005740 ORTHO05D007085 2.2e-36 156.0 118 67.8
CSS0030523 Camellia sinensis var. sinensis HOM05D005740 ORTHO05D007085 3.7e-36 155.2 120 66.7
MBI12_g14495_MAGBIO Magnolia biondii HOM05D005740 ORTHO05D007085 4.9e-36 154.8 127 63.0
QL09p007195 Quercus lobata HOM05D005740 ORTHO05D007085 6.3e-36 154.5 123 63.4
Ah.07g204700 Amaranthus hybridus HOM05D005740 ORTHO05D007085 8.3e-36 154.1 127 60.6
CARHR188930 Cardamine hirsuta HOM05D005740 ORTHO05D007085 8.3e-36 154.1 123 64.2
Duzib205G0029 Durio zibethinus HOM05D005740 ORTHO05D007085 8.3e-36 154.1 122 65.6
THA.LOC104798985 Tarenaya hassleriana HOM05D005740 ORTHO05D007085 1.4e-35 153.3 124 64.5
Lj1g0025829 Lotus japonicus HOM05D005740 ORTHO05D007085 2.4e-35 152.5 121 69.4
MSTRG.26978 Avicennia marina HOM05D005740 ORTHO05D007085 3.1e-35 152.1 121 65.3
AUR62006005 Chenopodium quinoa HOM05D005740 ORTHO05D007085 5.4e-35 151.4 126 60.3
AUR62035622 Chenopodium quinoa HOM05D005740 ORTHO05D007085 7.0e-35 151.0 126 61.1
BcaB04g19814 Brassica carinata HOM05D005740 ORTHO05D007085 9.2e-35 150.6 122 63.9
Lalb_Chr08g0239611 Lupinus albus HOM05D005740 ORTHO05D007085 9.2e-35 150.6 118 67.8
BcaNung01238 Brassica carinata HOM05D005740 ORTHO05D007085 2.7e-34 149.1 123 63.4
CSS0042637 Camellia sinensis var. sinensis HOM05D005740 ORTHO05D007085 2.7e-34 149.1 121 64.5
ECA232G2160 Erigeron canadensis HOM05D005740 ORTHO05D007085 3.5e-34 148.7 127 60.6
SalBow6G1442 Salvia bowleyana HOM05D005740 ORTHO05D007085 3.5e-34 148.7 146 54.8
BraA09t36289Z Brassica rapa HOM05D005740 ORTHO05D007085 7.8e-34 147.5 122 63.1
DCAR_020372 Daucus carota HOM05D005740 ORTHO05D007085 7.8e-34 147.5 118 62.7
Sopen06g029440 Solanum pennellii HOM05D005740 ORTHO05D007085 7.8e-34 147.5 125 60.0
ATR1155G047 Amborella trichopoda HOM05D005740 ORTHO05D007085 1.0e-33 147.1 118 61.9
Carub.0006s2231 Capsella rubella HOM05D005740 ORTHO05D007085 1.0e-33 147.1 122 63.9
Potri.011G055100 Populus trichocarpa HOM05D005740 ORTHO05D007085 1.3e-33 146.7 88 81.8
A09p06460 Brassica napus HOM05D005740 ORTHO05D007085 1.7e-33 146.4 123 61.8
Ca_16779_v3 Cicer arietinum L. HOM05D005740 ORTHO05D007085 1.7e-33 146.4 123 64.2
HanXRQChr04g0105951 Helianthus annuus HOM05D005740 ORTHO05D007085 1.7e-33 146.4 141 58.9
Prupe.2G318800 Prunus persica HOM05D005740 ORTHO05D007085 1.7e-33 146.4 121 63.6
Sp2g22850 Schrenkiella parvula HOM05D005740 ORTHO05D007085 1.7e-33 146.4 125 61.6
Aa31LG11G3730 Aethionema arabicum HOM05D005740 ORTHO05D007085 2.3e-33 146.0 123 64.2
Thhalv10004495m.g Eutrema salsugineum HOM05D005740 ORTHO05D007085 2.3e-33 146.0 124 61.3
Psat5g072000 Pisum sativum HOM05D005740 ORTHO05D007085 2.3e-33 146.0 123 66.7
Lsat_1_v5_gn_9_50040 Lactuca sativa HOM05D005740 ORTHO05D007085 2.9e-33 145.6 124 60.5
Aqoxy7G02158 Aquilegia oxysepala HOM05D005740 ORTHO05D007085 6.6e-33 144.4 120 64.2
EL10Ac3g05180 Beta vulgaris HOM05D005740 ORTHO05D007085 6.6e-33 144.4 124 59.7
FAN10G1912 Fragaria x ananassa HOM05D005740 ORTHO05D007085 6.6e-33 144.4 118 65.3
Sc13g0010280 Simmondsia chinensis HOM05D005740 ORTHO05D007085 6.6e-33 144.4 129 61.2
PGSC0003DMG400027021 Solanum tuberosum HOM05D005740 ORTHO05D007085 6.6e-33 144.4 125 58.4
FAN03G0834 Fragaria x ananassa HOM05D005740 ORTHO05D007085 8.6e-33 144.1 119 64.7
FAN10G2230 Fragaria x ananassa HOM05D005740 ORTHO05D007085 8.6e-33 144.1 119 64.7
BcaC04g23547 Brassica carinata HOM05D005740 ORTHO05D007085 1.1e-32 143.7 124 59.7
C09p07180 Brassica napus HOM05D005740 ORTHO05D007085 1.1e-32 143.7 124 59.7
Solyc06g073090.3 Solanum lycopersicum HOM05D005740 ORTHO05D007085 1.1e-32 143.7 124 58.9
Actinidia28282 Actinidia chinensis HOM05D005740 ORTHO05D007085 1.5e-32 143.3 121 63.6
FvH4_7g32900 Fragaria vesca HOM05D005740 ORTHO05D007085 1.5e-32 143.3 119 63.9
AL6G36080 Arabidopsis lyrata HOM05D005740 ORTHO05D007085 1.9e-32 142.9 124 62.1
Potri.011G054700 Populus trichocarpa HOM05D005740 ORTHO05D007085 2.5e-32 142.5 85 80.0
Medtr3g092720 Medicago truncatula HOM05D005740 ORTHO05D007085 3.3e-32 142.1 126 62.7
Aqoxy7G02157 Aquilegia oxysepala HOM05D005740 ORTHO05D007085 4.3e-32 141.7 118 59.3
Peaxi162Scf00618g00020 Petunia axillaris HOM05D005740 ORTHO05D007085 4.3e-32 141.7 124 56.5
TAR375G0796 Trochodendron aralioides HOM05D005740 ORTHO05D007085 4.3e-32 141.7 118 62.7
AT5G24490 Arabidopsis thaliana HOM05D005740 ORTHO05D007085 5.6e-32 141.4 124 60.5
FAN01G0684 Fragaria x ananassa HOM05D005740 ORTHO05D007085 7.3e-32 141.0 119 63.9
PSO782G4352 Papaver somniferum HOM05D005740 ORTHO05D007085 9.5e-32 140.6 123 62.6
Nitab4.5_0000115g0060 Nicotiana tabacum HOM05D005740 ORTHO05D007085 1.2e-31 140.2 124 58.9
Migut.F00988 Erythranthe guttata HOM05D005740 ORTHO05D007085 1.6e-31 139.8 133 57.1
CANSAT21G1962 Cannabis sativa HOM05D005740 ORTHO05D007085 3.6e-31 138.7 124 58.9
TPR.G33623 Trifolium pratense HOM05D005740 ORTHO05D007085 3.6e-31 138.7 123 61.8
Actinidia34269 Actinidia chinensis HOM05D005740 ORTHO05D007085 4.7e-31 138.3 127 55.9
Migut.F00153 Erythranthe guttata HOM05D005740 ORTHO05D007085 8.0e-31 137.5 118 57.6
RcHm_v2.0_Chr1g0382861 Rosa chinensis HOM05D005740 ORTHO05D007085 1.4e-30 136.7 118 61.9
PSO063G0961 Papaver somniferum HOM05D005740 ORTHO05D007085 3.0e-30 135.6 123 61.0
unitig_748.g7278 Utricularia gibba HOM05D005740 ORTHO05D007085 3.0e-30 135.6 129 54.3
Nitab4.5_0002895g0020 Nicotiana tabacum HOM05D005740 ORTHO05D007085 1.2e-29 133.7 127 56.7
SGA_v2.0_scaffold18G08464 Striga asiatica HOM05D005740 ORTHO05D007085 1.2e-29 133.7 128 57.0
HPP92_015050 Vanilla planifolia HOM05D005740 ORTHO05D007085 1.2e-29 133.7 129 54.3
A06p35310 Brassica napus HOM05D005740 ORTHO05D007085 2.4e-27 125.9 114 59.6
BraA06t26457Z Brassica rapa HOM05D005740 ORTHO05D007085 2.4e-27 125.9 114 59.6
BcaC09g52279 Brassica carinata HOM05D005740 ORTHO05D007085 1.2e-26 123.6 118 55.1
C01p22900 Brassica napus HOM05D005740 ORTHO05D007085 1.2e-26 123.6 118 55.9
BcaC09g52277 Brassica carinata HOM05D005740 ORTHO05D007085 1.6e-26 123.2 118 55.1
Atru.chr12.2428 Acer truncatum HOM05D005740 ORTHO05D007085 2.0e-26 122.9 97 66.0
BcaC09g49688 Brassica carinata HOM05D005740 ORTHO05D007085 6.0e-26 121.3 109 59.6
vmacro06441 Vaccinium macrocarpon HOM05D005740 ORTHO05D007085 3.9e-25 118.6 128 52.3
vmacro22782 Vaccinium macrocarpon HOM05D005740 ORTHO05D007085 6.6e-25 117.9 130 51.5
Lj3A895G46 Lonicera japonica HOM05D005740 ORTHO05D007085 1.5e-24 116.7 110 57.3
Rhsim03G0215400 Rhododendron simsii HOM05D005740 ORTHO05D007085 2.5e-24 115.9 127 51.2
Os03g0856500 Oryza sativa ssp. japonica HOM05D005740 ORTHO05D007085 2.1e-23 112.8 124 50.0
Pp3c18_22260 Physcomitrium patens HOM05D005740 ORTHO05D007085 4.0e-22 108.6 132 48.5
AagrBONN_evm.TU.Sc2ySwM_362.2025 Anthoceros agrestis HOM05D005740 ORTHO05D007085 8.9e-22 107.5 129 48.8
Mapoly0136s0019 Marchantia polymorpha HOM05D005740 ORTHO05D007085 1.5e-21 106.7 131 47.3
Dinv29211 Davidia involucrata HOM05D005740 ORTHO05D007085 3.4e-21 105.5 85 63.5
SMO145G0182 Selaginella moellendorffii HOM05D005740 ORTHO05D007085 5.8e-21 104.8 131 42.7
Pp3c21_1350 Physcomitrium patens HOM05D005740 ORTHO05D007085 2.9e-20 102.4 124 49.2
Zm00001eb064950 Zea mays HOM05D005740 ORTHO05D007085 2.9e-20 102.4 118 49.2
Hund09713 Selenicereus undatus HOM05D005740 ORTHO05D007085 1.4e-19 100.1 120 47.5
CAN.G65.152 Capsicum annuum HOM05D005740 ORTHO05D007085 7.0e-19 97.8 77 62.3
Actinidia08698 Actinidia chinensis HOM05D005740 ORTHO05D007085 2.7e-18 95.9 78 59.0
CBR_g44535 Chara braunii HOM05D005740 ORTHO05D007085 2.3e-17 92.8 131 42.7
C01p22870 Brassica napus HOM05D005740 ORTHO05D007085 3.0e-17 92.4 118 46.6
C01p22930 Brassica napus HOM05D005740 ORTHO05D007085 3.0e-17 92.4 118 46.6
C01p22950 Brassica napus HOM05D005740 ORTHO05D007085 4.1e-11 72.0 105 41.9
MBI08_g17822_MAGBIO Magnolia biondii HOM05D005740 ORTHO05D007085 5.4e-11 71.6 65 58.5
MCO12G039 Micromonas commoda HOM05D005740 ORTHO05D007085 3.0e-09 65.9 132 34.1
Cre05.g237450 Chlamydomonas reinhardtii HOM05D005740 ORTHO05D007085 1.8e-06 56.6 136 30.9


User provided reference genes

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