Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.011G155800 Populus trichocarpa HOM05D004135 ORTHO05D005558 2.0e-161 572.4 291 100.0
Gohir.A05G111900 Gossypium hirsutum HOM05D004135 ORTHO05D005558 6.0e-150 534.3 291 91.4
Cpa.g.sc285.5 Carica papaya HOM05D004135 ORTHO05D005558 9.6e-148 526.9 290 91.4
CiPaw.09G148400 Carya illinoinensis HOM05D004135 ORTHO05D005558 9.6e-148 526.9 291 89.7
Gorai.005G119100 Gossypium raimondii HOM05D004135 ORTHO05D005558 4.7e-147 524.6 291 89.3
Sabra11G0144000 Salix brachista HOM05D004135 ORTHO05D005558 4.7e-147 524.6 306 89.5
Aa31LG10G6460 Aethionema arabicum HOM05D004135 ORTHO05D005558 1.1e-146 523.5 291 89.7
Gohir.D02G104900 Gossypium hirsutum HOM05D004135 ORTHO05D005558 1.4e-146 523.1 291 89.0
QL05p064858 Quercus lobata HOM05D004135 ORTHO05D005558 1.8e-146 522.7 290 89.7
Manes.06G053900 Manihot esculenta HOM05D004135 ORTHO05D005558 4.0e-146 521.5 288 91.3
THA.LOC104814339 Tarenaya hassleriana HOM05D004135 ORTHO05D005558 5.2e-146 521.2 291 89.0
Gohir.A02G088700 Gossypium hirsutum HOM05D004135 ORTHO05D005558 6.9e-146 520.8 290 89.3
Manes.14G126900 Manihot esculenta HOM05D004135 ORTHO05D005558 9.0e-146 520.4 288 91.7
Aa31LG6G11870 Aethionema arabicum HOM05D004135 ORTHO05D005558 1.2e-145 520.0 291 88.3
THA.LOC104798582 Tarenaya hassleriana HOM05D004135 ORTHO05D005558 2.6e-145 518.8 291 88.3
Duzib235G1539 Durio zibethinus HOM05D004135 ORTHO05D005558 5.8e-145 517.7 291 89.0
BcaC01g05751 Brassica carinata HOM05D004135 ORTHO05D005558 9.9e-145 516.9 291 87.6
C03p22580 Brassica napus HOM05D004135 ORTHO05D005558 9.9e-145 516.9 291 87.6
Ciclev10016127m.g Citrus clementina HOM05D004135 ORTHO05D005558 1.3e-144 516.5 290 89.0
Duzib160G0522 Durio zibethinus HOM05D004135 ORTHO05D005558 1.7e-144 516.2 291 89.0
Thhalv10017028m.g Eutrema salsugineum HOM05D004135 ORTHO05D005558 1.7e-144 516.2 291 89.3
BolC3t14655H Brassica oleracea HOM05D004135 ORTHO05D005558 2.2e-144 515.8 291 88.0
BraA03t11189Z Brassica rapa HOM05D004135 ORTHO05D005558 2.2e-144 515.8 291 87.3
A03p19330 Brassica napus HOM05D004135 ORTHO05D005558 8.4e-144 513.8 291 87.3
MELO3C007042.2 Cucumis melo HOM05D004135 ORTHO05D005558 8.4e-144 513.8 288 87.8
Gohir.D05G112400 Gossypium hirsutum HOM05D004135 ORTHO05D005558 1.9e-143 512.7 291 88.3
AT1G30630 Arabidopsis thaliana HOM05D004135 ORTHO05D005558 2.4e-143 512.3 291 87.3
Cfa000762 Carpinus fangiana HOM05D004135 ORTHO05D005558 2.4e-143 512.3 291 87.3
Sp1g26530 Schrenkiella parvula HOM05D004135 ORTHO05D005558 2.4e-143 512.3 291 86.6
Gorai.009G116600 Gossypium raimondii HOM05D004135 ORTHO05D005558 3.2e-143 511.9 291 88.3
Thecc.06G007700 Theobroma cacao HOM05D004135 ORTHO05D005558 3.2e-143 511.9 290 89.0
Carub.0001s2889 Capsella rubella HOM05D004135 ORTHO05D005558 4.2e-143 511.5 291 87.3
CsaV3_6G052670 Cucumis sativus L. HOM05D004135 ORTHO05D005558 4.2e-143 511.5 288 87.2
BcaB06g28829 Brassica carinata HOM05D004135 ORTHO05D005558 7.1e-143 510.8 291 86.9
ClCG01G025420 Citrullus lanatus HOM05D004135 ORTHO05D005558 7.1e-143 510.8 288 87.2
BraA04t18166Z Brassica rapa HOM05D004135 ORTHO05D005558 1.2e-142 510.0 291 86.9
Thhalv10008349m.g Eutrema salsugineum HOM05D004135 ORTHO05D005558 1.2e-142 510.0 291 86.3
Sp4g17120 Schrenkiella parvula HOM05D004135 ORTHO05D005558 2.7e-142 508.8 291 87.3
AL1G44690 Arabidopsis lyrata HOM05D004135 ORTHO05D005558 3.5e-142 508.4 291 86.6
C04p64030 Brassica napus HOM05D004135 ORTHO05D005558 1.0e-141 506.9 291 86.3
A04p26610 Brassica napus HOM05D004135 ORTHO05D005558 1.3e-141 506.5 291 86.3
AT2G34840 Arabidopsis thaliana HOM05D004135 ORTHO05D005558 3.9e-141 505.0 291 85.9
Sed0027064 Sechium edule HOM05D004135 ORTHO05D005558 5.1e-141 504.6 288 85.8
BcaC02g07752 Brassica carinata HOM05D004135 ORTHO05D005558 6.6e-141 504.2 291 86.3
BolC4t27879H Brassica oleracea HOM05D004135 ORTHO05D005558 8.7e-141 503.8 291 86.3
CARHR030110 Cardamine hirsuta HOM05D004135 ORTHO05D005558 1.1e-140 503.4 291 85.6
Oeu060331.1 Olea europaea HOM05D004135 ORTHO05D005558 3.3e-140 501.9 290 86.6
BcaB07g32703 Brassica carinata HOM05D004135 ORTHO05D005558 4.3e-140 501.5 291 84.5
CANSAT35G0477 Cannabis sativa HOM05D004135 ORTHO05D005558 1.3e-139 500.0 290 83.8
BcaC05g27087 Brassica carinata HOM05D004135 ORTHO05D005558 1.6e-139 499.6 291 84.2
C05p29690 Brassica napus HOM05D004135 ORTHO05D005558 1.6e-139 499.6 291 84.2
BolC5t31698H Brassica oleracea HOM05D004135 ORTHO05D005558 1.6e-139 499.6 291 84.2
A09p35780 Brassica napus HOM05D004135 ORTHO05D005558 3.6e-139 498.4 291 83.8
BraA09t39101Z Brassica rapa HOM05D004135 ORTHO05D005558 3.6e-139 498.4 291 83.8
Sed0006315 Sechium edule HOM05D004135 ORTHO05D005558 3.6e-139 498.4 289 86.2
GSVIVG01021747001 Vitis vinifera HOM05D004135 ORTHO05D005558 3.6e-139 498.4 288 86.5
Carub.0004s1652 Capsella rubella HOM05D004135 ORTHO05D005558 4.8e-139 498.0 291 84.2
Eucgr.D01026 Eucalyptus grandis HOM05D004135 ORTHO05D005558 4.8e-139 498.0 288 86.5
PSO541G2415 Papaver somniferum HOM05D004135 ORTHO05D005558 6.2e-139 497.7 287 85.4
SalBow8G1631 Salvia bowleyana HOM05D004135 ORTHO05D005558 3.1e-138 495.4 289 85.5
SalBow8G2729 Salvia bowleyana HOM05D004135 ORTHO05D005558 3.1e-138 495.4 289 85.5
MSTRG.7569 Avicennia marina HOM05D004135 ORTHO05D005558 9.0e-138 493.8 291 84.5
PSO675G0864 Papaver somniferum HOM05D004135 ORTHO05D005558 9.0e-138 493.8 287 85.0
Migut.M01941 Erythranthe guttata HOM05D004135 ORTHO05D005558 1.2e-137 493.4 290 85.2
Hma1.2p1_0300F.1_g117980 Hydrangea macrophylla HOM05D004135 ORTHO05D005558 1.2e-137 493.4 288 84.7
MSTRG.16319 Avicennia marina HOM05D004135 ORTHO05D005558 2.6e-137 492.3 290 84.8
CAN.G675.30 Capsicum annuum HOM05D004135 ORTHO05D005558 3.4e-137 491.9 292 84.6
Lj1A1156T44 Lonicera japonica HOM05D004135 ORTHO05D005558 5.8e-137 491.1 300 82.7
Nn7g38349 Nelumbo nucifera HOM05D004135 ORTHO05D005558 1.3e-136 490.0 288 85.1
TAR629G2923 Trochodendron aralioides HOM05D004135 ORTHO05D005558 1.7e-136 489.6 287 84.0
Nitab4.5_0012414g0010 Nicotiana tabacum HOM05D004135 ORTHO05D005558 2.2e-136 489.2 290 83.8
Sopen02g009560 Solanum pennellii HOM05D004135 ORTHO05D005558 2.2e-136 489.2 287 86.1
Nitab4.5_0001219g0030 Nicotiana tabacum HOM05D004135 ORTHO05D005558 2.9e-136 488.8 290 83.8
Peaxi162Scf00195g00518 Petunia axillaris HOM05D004135 ORTHO05D005558 3.8e-136 488.4 287 84.3
Prupe.4G101800 Prunus persica HOM05D004135 ORTHO05D005558 4.9e-136 488.0 291 83.2
DCAR_003828 Daucus carota HOM05D004135 ORTHO05D005558 6.4e-136 487.6 291 83.8
PGR083G2348 Punica granatum HOM05D004135 ORTHO05D005558 8.4e-136 487.3 292 83.9
HanXRQChr04g0119201 Helianthus annuus HOM05D004135 ORTHO05D005558 1.4e-135 486.5 291 83.5
Solyc02g030243.1 Solanum lycopersicum HOM05D004135 ORTHO05D005558 1.4e-135 486.5 287 85.7
PGSC0003DMG400031401 Solanum tuberosum HOM05D004135 ORTHO05D005558 1.9e-135 486.1 287 85.4
AUR62027344 Chenopodium quinoa HOM05D004135 ORTHO05D005558 5.4e-135 484.6 288 82.6
PGSC0003DMG400021137 Solanum tuberosum HOM05D004135 ORTHO05D005558 5.4e-135 484.6 292 83.2
TAR627G0684 Trochodendron aralioides HOM05D004135 ORTHO05D005558 5.4e-135 484.6 287 83.6
Lsat_1_v5_gn_1_86700 Lactuca sativa HOM05D004135 ORTHO05D005558 9.3e-135 483.8 289 82.0
TWI81G0788 Tripterygium wilfordii HOM05D004135 ORTHO05D005558 9.3e-135 483.8 289 85.1
Sc24g0002580 Simmondsia chinensis HOM05D004135 ORTHO05D005558 1.2e-134 483.4 288 83.7
Solyc02g069585.1 Solanum lycopersicum HOM05D004135 ORTHO05D005558 1.2e-134 483.4 287 83.6
Lj2A337T32 Lonicera japonica HOM05D004135 ORTHO05D005558 1.6e-134 483.0 284 84.2
Sopen02g018720 Solanum pennellii HOM05D004135 ORTHO05D005558 2.1e-134 482.6 287 83.6
HanXRQChr11g0340901 Helianthus annuus HOM05D004135 ORTHO05D005558 6.0e-134 481.1 289 81.0
EL10Ac8g19524 Beta vulgaris HOM05D004135 ORTHO05D005558 1.8e-133 479.6 288 83.0
SGA_v2.0_scaffold298G47640 Striga asiatica HOM05D004135 ORTHO05D005558 2.3e-133 479.2 325 77.2
TWI15G0841 Tripterygium wilfordii HOM05D004135 ORTHO05D005558 3.0e-133 478.8 291 83.8
AUR62042515 Chenopodium quinoa HOM05D004135 ORTHO05D005558 5.1e-133 478.0 288 81.2
Nn4g26687 Nelumbo nucifera HOM05D004135 ORTHO05D005558 4.3e-132 474.9 288 81.9
Aqoxy6G00202 Aquilegia oxysepala HOM05D004135 ORTHO05D005558 5.6e-132 474.6 287 81.2
Lsat_1_v5_gn_7_31180 Lactuca sativa HOM05D004135 ORTHO05D005558 5.6e-132 474.6 291 82.5
unitig_748.g7354 Utricularia gibba HOM05D004135 ORTHO05D005558 1.3e-131 473.4 290 81.4
Atru.chr6.3256 Acer truncatum HOM05D004135 ORTHO05D005558 1.6e-131 473.0 290 83.4
Os04g0612600 Oryza sativa ssp. japonica HOM05D004135 ORTHO05D005558 1.6e-131 473.0 288 81.2
DCAR_007807 Daucus carota HOM05D004135 ORTHO05D005558 2.1e-131 472.6 291 82.8
CDE02G1412 Ceratophyllum demersum HOM05D004135 ORTHO05D005558 3.7e-131 471.9 288 80.9
ATR0763G246 Amborella trichopoda HOM05D004135 ORTHO05D005558 4.8e-131 471.5 288 79.5
Lj6g0020585 Lotus japonicus HOM05D004135 ORTHO05D005558 1.2e-129 466.8 287 79.4
vmacro03457 Vaccinium macrocarpon HOM05D004135 ORTHO05D005558 1.2e-129 466.8 303 79.2
CSS0034299 Camellia sinensis var. sinensis HOM05D004135 ORTHO05D005558 1.5e-129 466.5 301 79.1
Glyma.15G136100 Glycine max HOM05D004135 ORTHO05D005558 3.4e-129 465.3 284 79.6
Zm00001eb430730 Zea mays HOM05D004135 ORTHO05D005558 4.5e-129 464.9 288 79.5
Ah.11g045310 Amaranthus hybridus HOM05D004135 ORTHO05D005558 5.8e-129 464.5 288 79.5
TWI38G0133 Tripterygium wilfordii HOM05D004135 ORTHO05D005558 5.8e-129 464.5 291 81.8
HPP92_013200 Vanilla planifolia HOM05D004135 ORTHO05D005558 5.8e-129 464.5 288 80.9
Glyma.09G030400 Glycine max HOM05D004135 ORTHO05D005558 3.8e-128 461.8 284 78.9
Ca_00931_v3 Cicer arietinum L. HOM05D004135 ORTHO05D005558 4.9e-128 461.5 287 79.4
Medtr2g032130 Medicago truncatula HOM05D004135 ORTHO05D005558 6.4e-128 461.1 287 78.4
Phvul.006G122500 Phaseolus vulgaris HOM05D004135 ORTHO05D005558 6.4e-128 461.1 284 79.2
arahy.Tifrunner.gnm1.ann1.CJHC7K Arachis hypogaea HOM05D004135 ORTHO05D005558 2.7e-126 455.7 292 78.8
RcHm_v2.0_Chr5g0018341 Rosa chinensis HOM05D004135 ORTHO05D005558 1.8e-125 453.0 292 78.8
MBI18_g26296_MAGBIO Magnolia biondii HOM05D004135 ORTHO05D005558 5.1e-125 451.4 309 74.1
Lalb_Chr20g0120301 Lupinus albus HOM05D004135 ORTHO05D005558 3.3e-124 448.7 287 76.7
FvH4_3g11400 Fragaria vesca HOM05D004135 ORTHO05D005558 1.8e-122 443.0 291 75.9
MD05G1263700 Malus domestica HOM05D004135 ORTHO05D005558 1.8e-122 443.0 291 76.6
Actinidia31378 Actinidia chinensis HOM05D004135 ORTHO05D005558 9.0e-122 440.7 259 86.1
FAN25G0882 Fragaria x ananassa HOM05D004135 ORTHO05D005558 2.6e-121 439.1 293 75.8
vmacro10993 Vaccinium macrocarpon HOM05D004135 ORTHO05D005558 3.4e-121 438.7 446 56.1
FAN21G1456 Fragaria x ananassa HOM05D004135 ORTHO05D005558 7.6e-121 437.6 293 75.1
FAN16G1287 Fragaria x ananassa HOM05D004135 ORTHO05D005558 1.3e-120 436.8 293 75.1
ECA236G2122 Erigeron canadensis HOM05D000091 ORTHO05D001510 2.9e-120 435.6 274 78.5
Actinidia32352 Actinidia chinensis HOM05D004135 ORTHO05D005558 5.5e-119 431.4 290 77.9
Oeu052702.4 Olea europaea HOM05D004135 ORTHO05D005558 2.1e-118 429.5 302 74.8
Haze_08569 Corylus avellana HOM05D004135 ORTHO05D005558 6.0e-118 427.9 311 73.0
VMungo0540G1545 Vigna mungo HOM05D004135 ORTHO05D005558 3.0e-117 425.6 284 74.6
MD10G1241400 Malus domestica HOM05D004135 ORTHO05D005558 2.5e-116 422.5 290 72.8
Psat1g164080 Pisum sativum HOM05D004135 ORTHO05D005558 2.6e-113 412.5 253 79.4
Dinv04216 Davidia involucrata HOM05D004135 ORTHO05D005558 2.9e-112 409.1 230 88.3
TPR.G8030 Trifolium pratense HOM05D004135 ORTHO05D005558 3.2e-111 405.6 257 78.2
Zm00001eb432010 Zea mays HOM05D004135 ORTHO05D005558 1.6e-110 403.3 295 69.5
Cc09_g07090 Coffea canephora HOM05D004135 ORTHO05D005558 4.6e-110 401.7 232 86.2
Pp3c27_2170 Physcomitrium patens HOM05D004135 ORTHO05D005558 4.6e-110 401.7 287 69.3
Os04g0644700 Oryza sativa ssp. japonica HOM05D004135 ORTHO05D005558 6.1e-110 401.4 298 70.5
Pp3c6_18240 Physcomitrium patens HOM05D004135 ORTHO05D005558 3.0e-109 399.1 287 69.0
Pp3c16_16890 Physcomitrium patens HOM05D004135 ORTHO05D005558 1.5e-108 396.7 287 68.6
Mapoly0002s0056 Marchantia polymorpha HOM05D004135 ORTHO05D005558 8.5e-104 380.9 287 64.8
arahy.Tifrunner.gnm1.ann1.NB4WMM Arachis hypogaea HOM05D004135 ORTHO05D005558 1.2e-102 377.1 230 81.3
Rhsim02G0165800 Rhododendron simsii HOM05D004135 ORTHO05D005558 1.1e-98 364.0 296 66.9
AagrBONN_evm.TU.Sc2ySwM_117.3836 Anthoceros agrestis HOM05D004135 ORTHO05D005558 1.0e-93 347.4 291 61.9
Actinidia25200 Actinidia chinensis HOM05D004135 ORTHO05D005558 1.5e-87 327.0 203 80.8
COL.COLO4_26892 Corchorus olitorius HOM05D004135 ORTHO05D005558 1.8e-85 320.1 270 65.9
SMO358G0532 Selaginella moellendorffii HOM05D004135 ORTHO05D005558 2.2e-83 313.2 285 57.9
Cre13.g592450 Chlamydomonas reinhardtii HOM05D004135 ORTHO05D005558 2.1e-78 296.6 287 53.0
CBR_g34668 Chara braunii HOM05D004135 ORTHO05D005558 4.7e-70 268.9 289 49.5
PRCOL_00001868 Prasinoderma coloniale HOM05D004135 ORTHO05D005558 1.5e-68 263.8 285 48.8
MCO11G236 Micromonas commoda HOM05D004135 ORTHO05D005558 2.8e-67 259.6 281 47.7
CDE06G2577 Ceratophyllum demersum HOM05D004135 ORTHO05D005558 3.2e-66 256.1 162 77.8
Thecc.06G007200 Theobroma cacao HOM05D004135 ORTHO05D005558 1.2e-57 227.6 113 96.5
Zm00001eb274480 Zea mays HOM05D004135 ORTHO05D005558 6.0e-57 225.3 154 69.5
Haze_05958 Corylus avellana HOM05D006556 ORTHO05D008146 1.3e-56 224.2 151 76.2
COL.COLO4_29004 Corchorus olitorius HOM05D004135 ORTHO05D005558 6.8e-53 211.8 140 79.3
Zm00001eb135420 Zea mays HOM05D004135 ORTHO05D443401 2.3e-24 117.1 82 73.2
SGA_v2.0_scaffold147G36337 Striga asiatica HOM05D004135 ORTHO05D401852 2.5e-23 113.6 124 51.6
Zm00001eb194710 Zea mays HOM05D004186 ORTHO05D006965 2.8e-22 110.2 81 69.1
AUR62011277 Chenopodium quinoa HOM05D004135 ORTHO05D138132 1.4e-21 107.8 52 96.2
RcHm_v2.0_Chr6g0289631 Rosa chinensis HOM05D004135 ORTHO05D008146 4.0e-21 106.3 66 78.8
Zm00001eb059010 Zea mays HOM05D004186 ORTHO05D006965 4.0e-21 106.3 81 67.9
Zm00001eb180170 Zea mays HOM05D004135 ORTHO05D444922 5.3e-21 105.9 75 69.3
SGA_v2.0_scaffold147G36336 Striga asiatica HOM05D004135 ORTHO05D000001 6.9e-21 105.5 152 42.8
Zm00001eb347580 Zea mays HOM05D004186 ORTHO05D006965 9.9e-20 101.7 81 65.4
RcHm_v2.0_Chr6g0289621 Rosa chinensis HOM05D004135 ORTHO05D028393 1.9e-18 97.4 70 68.6
CSS0024113 Camellia sinensis var. sinensis HOM05D004135 ORTHO05D028393 7.1e-18 95.5 57 78.9
Zm00001eb388920 Zea mays HOM05D000787 ORTHO05D001019 7.1e-18 95.5 144 45.1
RcHm_v2.0_Chr0c29g0501101 Rosa chinensis HOM05D004135 ORTHO05D028393 7.4e-15 85.5 58 70.7
RcHm_v2.0_Chr1g0337861 Rosa chinensis HOM05D004135 ORTHO05D028393 7.4e-15 85.5 58 70.7
Zm00001eb297670 Zea mays HOM05D004958 ORTHO05D005983 1.4e-10 71.2 53 67.9
AUR62044460 Chenopodium quinoa HOM05D004135 ORTHO05D137931 1.8e-08 64.3 38 81.6
Zm00001eb373640 Zea mays HOM05D004135 ORTHO05D444823 1.1e-07 61.6 65 55.4
VMungo0540G1336 Vigna mungo HOM05D000328 ORTHO05D000191 1.5e-07 61.2 46 60.9


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