Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.011G055100 Populus trichocarpa HOM05D005740 ORTHO05D007085 1.2e-79 299.7 146 100.0
Potri.012G026375 Populus trichocarpa HOM05D005740 ORTHO05D007085 7.1e-43 177.6 156 61.5
Potri.012G005800 Populus trichocarpa HOM05D005740 ORTHO05D007085 7.9e-42 174.1 186 53.8
Potri.015G002200 Populus trichocarpa HOM05D005740 ORTHO05D007085 3.0e-41 172.2 187 54.5
Potri.011G054700 Populus trichocarpa HOM05D005740 ORTHO05D007085 1.5e-40 169.9 86 96.5
Sabra15G0001400 Salix brachista HOM05D005740 ORTHO05D007085 1.5e-40 169.9 186 52.7
Ciclev10021260m.g Citrus clementina HOM05D005740 ORTHO05D007085 1.9e-40 169.5 186 52.7
Manes.05G197600 Manihot esculenta HOM05D005740 ORTHO05D007085 7.4e-40 167.5 186 52.2
GSVIVG01038643001 Vitis vinifera HOM05D005740 ORTHO05D007085 1.1e-38 163.7 186 49.5
Nn3g18795 Nelumbo nucifera HOM05D005740 ORTHO05D007085 5.3e-38 161.4 186 48.4
PGR042G0341 Punica granatum HOM05D005740 ORTHO05D007085 1.2e-37 160.2 186 49.5
COL.COLO4_14370 Corchorus olitorius HOM05D005740 ORTHO05D007085 1.5e-37 159.8 186 48.9
TWI23G0506 Tripterygium wilfordii HOM05D005740 ORTHO05D007085 1.0e-36 157.1 195 49.2
CiPaw.05G205100 Carya illinoinensis HOM05D005740 ORTHO05D007085 1.3e-36 156.8 191 49.2
MD07G1298900 Malus domestica HOM05D005740 ORTHO05D007085 1.3e-36 156.8 188 50.0
Cpa.g.sc3.153 Carica papaya HOM05D005740 ORTHO05D007085 1.7e-36 156.4 191 49.7
Phvul.009G045100 Phaseolus vulgaris HOM05D005740 ORTHO05D007085 2.2e-36 156.0 187 48.7
Thecc.03G208700 Theobroma cacao HOM05D005740 ORTHO05D007085 2.9e-36 155.6 196 48.0
VMungo1309G0132 Vigna mungo HOM05D005740 ORTHO05D007085 3.8e-36 155.2 187 49.7
Glyma.06G136500 Glycine max HOM05D005740 ORTHO05D007085 8.5e-36 154.1 187 48.7
THA.LOC104798985 Tarenaya hassleriana HOM05D005740 ORTHO05D007085 1.9e-35 152.9 192 49.0
Glyma.04G228400 Glycine max HOM05D005740 ORTHO05D007085 2.5e-35 152.5 187 48.1
Gohir.D08G116100 Gossypium hirsutum HOM05D005740 ORTHO05D007085 3.2e-35 152.1 199 46.2
Gorai.004G125000 Gossypium raimondii HOM05D005740 ORTHO05D007085 3.2e-35 152.1 199 46.2
Atru.chr12.2428 Acer truncatum HOM05D005740 ORTHO05D007085 4.2e-35 151.8 165 53.3
ClCG02G000010 Citrullus lanatus HOM05D005740 ORTHO05D007085 4.2e-35 151.8 186 48.4
CDE05G3242 Ceratophyllum demersum HOM05D005740 ORTHO05D007085 7.2e-35 151.0 186 46.2
Eucgr.A01406 Eucalyptus grandis HOM05D005740 ORTHO05D007085 7.2e-35 151.0 188 48.9
QL09p007195 Quercus lobata HOM05D005740 ORTHO05D007085 9.4e-35 150.6 191 48.2
CsaV3_2G019690 Cucumis sativus L. HOM05D005740 ORTHO05D007085 1.2e-34 150.2 186 47.3
Duzib205G0029 Durio zibethinus HOM05D005740 ORTHO05D007085 2.7e-34 149.1 190 47.9
DCAR_020372 Daucus carota HOM05D005740 ORTHO05D007085 3.6e-34 148.7 190 46.8
arahy.Tifrunner.gnm1.ann1.2GB72X Arachis hypogaea HOM05D005740 ORTHO05D007085 4.6e-34 148.3 187 47.6
Sed0000166 Sechium edule HOM05D005740 ORTHO05D007085 6.1e-34 147.9 188 47.9
arahy.Tifrunner.gnm1.ann1.88XX4I Arachis hypogaea HOM05D005740 ORTHO05D007085 7.9e-34 147.5 187 47.6
CARHR188930 Cardamine hirsuta HOM05D005740 ORTHO05D007085 7.9e-34 147.5 191 46.1
Haze_00297 Corylus avellana HOM05D005740 ORTHO05D007085 7.9e-34 147.5 191 47.6
CDE02G4511 Ceratophyllum demersum HOM05D005740 ORTHO05D007085 1.4e-33 146.7 186 45.7
CSS0030523 Camellia sinensis var. sinensis HOM05D005740 ORTHO05D007085 1.8e-33 146.4 188 47.9
ECA232G2160 Erigeron canadensis HOM05D005740 ORTHO05D007085 1.8e-33 146.4 193 46.1
MSTRG.26978 Avicennia marina HOM05D005740 ORTHO05D007085 3.0e-33 145.6 189 46.6
Potri.012G009001 Populus trichocarpa HOM05D005740 ORTHO05D007085 3.9e-33 145.2 88 81.8
Sopen06g029440 Solanum pennellii HOM05D005740 ORTHO05D007085 3.9e-33 145.2 193 46.1
CSS0042637 Camellia sinensis var. sinensis HOM05D005740 ORTHO05D007085 5.1e-33 144.8 189 47.1
Cfa016160 Carpinus fangiana HOM05D005740 ORTHO05D007085 6.7e-33 144.4 191 47.1
Sp2g22850 Schrenkiella parvula HOM05D005740 ORTHO05D007085 6.7e-33 144.4 193 46.1
Lsat_1_v5_gn_9_50040 Lactuca sativa HOM05D005740 ORTHO05D007085 8.8e-33 144.1 192 45.3
BcaNung01238 Brassica carinata HOM05D005740 ORTHO05D007085 1.1e-32 143.7 191 46.1
Thhalv10004495m.g Eutrema salsugineum HOM05D005740 ORTHO05D007085 1.1e-32 143.7 192 45.8
Ah.07g204700 Amaranthus hybridus HOM05D005740 ORTHO05D007085 1.9e-32 142.9 195 45.1
A09p06460 Brassica napus HOM05D005740 ORTHO05D007085 1.9e-32 142.9 191 45.5
BcaB04g19814 Brassica carinata HOM05D005740 ORTHO05D007085 2.5e-32 142.5 190 45.8
FAN03G0834 Fragaria x ananassa HOM05D005740 ORTHO05D007085 2.5e-32 142.5 186 47.8
FAN10G2230 Fragaria x ananassa HOM05D005740 ORTHO05D007085 2.5e-32 142.5 186 47.8
Prupe.2G318800 Prunus persica HOM05D005740 ORTHO05D007085 2.5e-32 142.5 189 47.1
Gohir.A08G104500 Gossypium hirsutum HOM05D005740 ORTHO05D007085 5.7e-32 141.4 191 45.5
ATR1155G047 Amborella trichopoda HOM05D005740 ORTHO05D007085 7.4e-32 141.0 186 45.7
PGSC0003DMG400027021 Solanum tuberosum HOM05D005740 ORTHO05D007085 7.4e-32 141.0 193 45.1
BraA09t36289Z Brassica rapa HOM05D005740 ORTHO05D007085 9.7e-32 140.6 190 44.7
Carub.0006s2231 Capsella rubella HOM05D005740 ORTHO05D007085 9.7e-32 140.6 190 46.3
HanXRQChr04g0105951 Helianthus annuus HOM05D005740 ORTHO05D007085 9.7e-32 140.6 193 45.1
BcaC04g23547 Brassica carinata HOM05D005740 ORTHO05D007085 1.3e-31 140.2 192 44.3
C09p07180 Brassica napus HOM05D005740 ORTHO05D007085 1.3e-31 140.2 192 44.3
MBI12_g14495_MAGBIO Magnolia biondii HOM05D005740 ORTHO05D007085 1.3e-31 140.2 193 44.6
TAR375G0796 Trochodendron aralioides HOM05D005740 ORTHO05D007085 1.3e-31 140.2 186 45.7
Sc13g0010280 Simmondsia chinensis HOM05D005740 ORTHO05D007085 1.7e-31 139.8 196 45.4
Solyc06g073090.3 Solanum lycopersicum HOM05D005740 ORTHO05D007085 1.7e-31 139.8 192 44.8
EL10Ac3g05180 Beta vulgaris HOM05D005740 ORTHO05D007085 2.2e-31 139.4 192 43.8
CANSAT21G1962 Cannabis sativa HOM05D005740 ORTHO05D007085 2.2e-31 139.4 192 44.8
FAN01G0684 Fragaria x ananassa HOM05D005740 ORTHO05D007085 2.2e-31 139.4 186 47.3
AUR62035622 Chenopodium quinoa HOM05D005740 ORTHO05D007085 2.8e-31 139.0 194 43.8
Lalb_Chr08g0239611 Lupinus albus HOM05D005740 ORTHO05D007085 3.7e-31 138.7 187 46.5
MELO3C023190.2 Cucumis melo HOM05D005740 ORTHO05D007085 4.8e-31 138.3 160 48.8
Lj1g0025829 Lotus japonicus HOM05D005740 ORTHO05D007085 6.3e-31 137.9 189 46.6
AL6G36080 Arabidopsis lyrata HOM05D005740 ORTHO05D007085 8.2e-31 137.5 192 44.3
Aa31LG11G3730 Aethionema arabicum HOM05D005740 ORTHO05D007085 1.1e-30 137.1 191 46.1
AT5G24490 Arabidopsis thaliana HOM05D005740 ORTHO05D007085 1.4e-30 136.7 192 44.3
RcHm_v2.0_Chr1g0382861 Rosa chinensis HOM05D005740 ORTHO05D007085 1.4e-30 136.7 186 46.2
SalBow6G1442 Salvia bowleyana HOM05D005740 ORTHO05D007085 1.4e-30 136.7 201 40.8
Peaxi162Scf00618g00020 Petunia axillaris HOM05D005740 ORTHO05D007085 1.8e-30 136.3 184 44.0
FvH4_7g32900 Fragaria vesca HOM05D005740 ORTHO05D007085 3.1e-30 135.6 186 47.3
BcaC09g52277 Brassica carinata HOM05D005740 ORTHO05D007085 9.1e-30 134.0 173 48.0
Migut.F00153 Erythranthe guttata HOM05D005740 ORTHO05D007085 9.1e-30 134.0 186 43.0
Migut.F00988 Erythranthe guttata HOM05D005740 ORTHO05D007085 9.1e-30 134.0 190 43.2
Nitab4.5_0000115g0060 Nicotiana tabacum HOM05D005740 ORTHO05D007085 9.1e-30 134.0 192 43.2
unitig_748.g7278 Utricularia gibba HOM05D005740 ORTHO05D007085 2.6e-29 132.5 198 42.4
PSO782G4352 Papaver somniferum HOM05D005740 ORTHO05D007085 4.5e-29 131.7 186 43.0
Nitab4.5_0002895g0020 Nicotiana tabacum HOM05D005740 ORTHO05D007085 7.7e-29 131.0 195 43.1
AUR62006005 Chenopodium quinoa HOM05D005740 ORTHO05D007085 1.7e-28 129.8 167 44.9
Ca_16779_v3 Cicer arietinum L. HOM05D005740 ORTHO05D007085 1.7e-28 129.8 192 44.3
Aqoxy7G02158 Aquilegia oxysepala HOM05D005740 ORTHO05D007085 2.9e-28 129.0 188 43.6
Psat5g072000 Pisum sativum HOM05D005740 ORTHO05D007085 6.5e-28 127.9 192 43.8
Actinidia34269 Actinidia chinensis HOM05D005740 ORTHO05D007085 8.5e-28 127.5 195 41.5
Medtr3g092720 Medicago truncatula HOM05D005740 ORTHO05D007085 8.5e-28 127.5 189 43.9
BcaC09g52279 Brassica carinata HOM05D005740 ORTHO05D007085 1.1e-27 127.1 149 49.7
PSO063G0961 Papaver somniferum HOM05D005740 ORTHO05D007085 2.5e-27 125.9 186 41.9
Lj3A895G46 Lonicera japonica HOM05D005740 ORTHO05D007085 3.2e-27 125.6 196 41.3
Aqoxy7G02157 Aquilegia oxysepala HOM05D005740 ORTHO05D007085 5.5e-27 124.8 186 42.5
C01p22900 Brassica napus HOM05D005740 ORTHO05D007085 7.2e-27 124.4 164 47.6
SGA_v2.0_scaffold18G08464 Striga asiatica HOM05D005740 ORTHO05D007085 1.0e-25 120.6 196 38.8
Actinidia28282 Actinidia chinensis HOM05D005740 ORTHO05D007085 2.3e-25 119.4 189 41.8
HPP92_015050 Vanilla planifolia HOM05D005740 ORTHO05D007085 3.9e-25 118.6 197 38.1
TPR.G33623 Trifolium pratense HOM05D005740 ORTHO05D007085 2.6e-24 115.9 166 45.2
A06p35310 Brassica napus HOM05D005740 ORTHO05D007085 1.4e-22 110.2 178 39.3
BraA06t26457Z Brassica rapa HOM05D005740 ORTHO05D007085 1.4e-22 110.2 178 39.3
C01p22870 Brassica napus HOM05D005740 ORTHO05D007085 4.1e-22 108.6 158 45.6
vmacro06441 Vaccinium macrocarpon HOM05D005740 ORTHO05D007085 5.3e-22 108.2 196 38.3
vmacro22782 Vaccinium macrocarpon HOM05D005740 ORTHO05D007085 9.1e-22 107.5 198 37.9
BcaC09g49688 Brassica carinata HOM05D005740 ORTHO05D007085 1.5e-21 106.7 140 47.1
Rhsim03G0215400 Rhododendron simsii HOM05D005740 ORTHO05D007085 1.5e-21 106.7 195 39.0
Dinv29211 Davidia involucrata HOM05D005740 ORTHO05D007085 4.5e-21 105.1 146 44.5
FAN10G1912 Fragaria x ananassa HOM05D005740 ORTHO05D007085 5.9e-21 104.8 86 62.8
Os03g0856500 Oryza sativa ssp. japonica HOM05D005740 ORTHO05D007085 1.1e-19 100.5 193 37.8
C01p22930 Brassica napus HOM05D005740 ORTHO05D007085 1.2e-18 97.1 133 45.9
Zm00001eb064950 Zea mays HOM05D005740 ORTHO05D007085 1.0e-17 94.0 187 35.3
CAN.G65.152 Capsicum annuum HOM05D005740 ORTHO05D007085 3.0e-17 92.4 145 41.4
AagrBONN_evm.TU.Sc2ySwM_362.2025 Anthoceros agrestis HOM05D005740 ORTHO05D007085 1.5e-16 90.1 187 34.8
Pp3c18_22260 Physcomitrium patens HOM05D005740 ORTHO05D007085 2.6e-16 89.4 186 33.9
Hund09713 Selenicereus undatus HOM05D005740 ORTHO05D007085 4.4e-16 88.6 190 35.8
Mapoly0136s0019 Marchantia polymorpha HOM05D005740 ORTHO05D007085 7.4e-16 87.8 159 35.8
Pp3c21_1350 Physcomitrium patens HOM05D005740 ORTHO05D007085 9.7e-16 87.4 186 34.4
Actinidia08698 Actinidia chinensis HOM05D005740 ORTHO05D007085 1.8e-14 83.2 146 37.0
CBR_g44535 Chara braunii HOM05D005740 ORTHO05D007085 1.3e-12 77.0 187 32.1
SMO145G0182 Selaginella moellendorffii HOM05D005740 ORTHO05D007085 2.5e-11 72.8 187 31.0
C01p22950 Brassica napus HOM05D005740 ORTHO05D007085 2.7e-10 69.3 68 52.9
C01p22940 Brassica napus HOM05D005740 ORTHO05D007085 5.3e-06 55.1 44 61.4


User provided reference genes

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