Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.010G010448 Populus trichocarpa HOM05D004869 ORTHO05D005893 0.0e+00 1682.5 824 100.0
Sabra10G0006600 Salix brachista HOM05D004869 ORTHO05D005893 0.0e+00 1591.2 830 94.1
Potri.008G219000 Populus trichocarpa HOM05D004869 ORTHO05D005893 0.0e+00 1499.2 826 89.6
Atru.chr4.2905 Acer truncatum HOM05D004869 ORTHO05D005893 0.0e+00 1328.9 833 78.5
CiPaw.01G145300 Carya illinoinensis HOM05D004869 ORTHO05D005893 0.0e+00 1324.3 832 77.5
Cfa015427 Carpinus fangiana HOM05D004869 ORTHO05D005893 0.0e+00 1322.4 833 77.7
TWI73G0801 Tripterygium wilfordii HOM05D004869 ORTHO05D005893 0.0e+00 1312.4 832 76.6
QL06p010392 Quercus lobata HOM05D004869 ORTHO05D005893 0.0e+00 1311.6 834 77.0
Hma1.2p1_1352F.1_g277460 Hydrangea macrophylla HOM05D004869 ORTHO05D005893 0.0e+00 1310.4 832 76.8
Dinv44350 Davidia involucrata HOM05D004869 ORTHO05D005893 0.0e+00 1310.0 819 77.2
Prupe.1G131800 Prunus persica HOM05D004869 ORTHO05D005893 0.0e+00 1308.5 819 78.1
GSVIVG01035107001 Vitis vinifera HOM05D004869 ORTHO05D005893 0.0e+00 1308.5 827 76.9
Rhsim04G0226400 Rhododendron simsii HOM05D004869 ORTHO05D005893 0.0e+00 1307.7 831 76.2
Cpa.g.sc50.161 Carica papaya HOM05D004869 ORTHO05D005893 0.0e+00 1306.6 829 76.5
MD16G1164100 Malus domestica HOM05D004869 ORTHO05D005893 0.0e+00 1306.2 825 77.9
vmacro08186 Vaccinium macrocarpon HOM05D004869 ORTHO05D005893 0.0e+00 1301.6 851 74.9
RcHm_v2.0_Chr4g0423401 Rosa chinensis HOM05D004869 ORTHO05D005893 0.0e+00 1299.3 816 76.7
TWI53G1493 Tripterygium wilfordii HOM05D004869 ORTHO05D005893 0.0e+00 1299.3 832 76.2
CANSAT78G0178 Cannabis sativa HOM05D004869 ORTHO05D005893 0.0e+00 1297.3 835 75.3
Actinidia40299 Actinidia chinensis HOM05D004869 ORTHO05D005893 0.0e+00 1294.3 832 75.8
COL.COLO4_13820 Corchorus olitorius HOM05D004869 ORTHO05D005893 0.0e+00 1294.3 834 76.5
Thecc.04G289100 Theobroma cacao HOM05D004869 ORTHO05D005893 0.0e+00 1294.3 829 75.9
MD13G1164300 Malus domestica HOM05D004869 ORTHO05D005893 0.0e+00 1289.2 816 77.3
FvH4_4g18700 Fragaria vesca HOM05D004869 ORTHO05D005893 0.0e+00 1287.7 818 76.2
Ciclev10004342m.g Citrus clementina HOM05D004869 ORTHO05D005893 0.0e+00 1284.6 826 75.4
Sed0001345 Sechium edule HOM05D004869 ORTHO05D005893 0.0e+00 1282.3 834 74.7
ClCG05G006260 Citrullus lanatus HOM05D004869 ORTHO05D005893 0.0e+00 1281.9 832 74.3
MELO3C006684.2 Cucumis melo HOM05D004869 ORTHO05D005893 0.0e+00 1280.8 832 74.6
THA.LOC104802695 Tarenaya hassleriana HOM05D004869 ORTHO05D005893 0.0e+00 1280.4 823 74.6
FAN12G0537 Fragaria x ananassa HOM05D004869 ORTHO05D005893 0.0e+00 1276.5 827 75.1
Oeu016255.1 Olea europaea HOM05D004869 ORTHO05D005893 0.0e+00 1275.4 839 75.1
CsaV3_3G014880 Cucumis sativus L. HOM05D004869 ORTHO05D005893 0.0e+00 1274.2 832 74.3
Duzib212G0051 Durio zibethinus HOM05D004869 ORTHO05D005893 0.0e+00 1271.1 833 75.0
Ciclev10004291m.g Citrus clementina HOM05D004869 ORTHO05D005893 0.0e+00 1270.4 833 74.9
VMungo1309G2596 Vigna mungo HOM05D004869 ORTHO05D005893 0.0e+00 1268.4 833 73.8
Aqoxy5G00789 Aquilegia oxysepala HOM05D004869 ORTHO05D005893 0.0e+00 1266.1 835 75.3
Glyma.09G042000 Glycine max HOM05D004869 ORTHO05D005893 0.0e+00 1265.8 832 74.2
Glyma.15G150900 Glycine max HOM05D004869 ORTHO05D005893 0.0e+00 1265.4 832 73.9
AT3G06810 Arabidopsis thaliana HOM05D004869 ORTHO05D005893 0.0e+00 1265.0 824 73.7
Phvul.009G250700 Phaseolus vulgaris HOM05D004869 ORTHO05D005893 0.0e+00 1264.6 833 73.9
FAN12G1313 Fragaria x ananassa HOM05D004869 ORTHO05D005893 0.0e+00 1263.8 857 72.6
Gorai.005G061800 Gossypium raimondii HOM05D004869 ORTHO05D005893 0.0e+00 1262.7 834 74.0
FAN17G0377 Fragaria x ananassa HOM05D004869 ORTHO05D005893 0.0e+00 1262.3 835 73.7
Manes.03G198800 Manihot esculenta HOM05D004869 ORTHO05D005893 0.0e+00 1262.3 833 75.8
Lj6g0019427 Lotus japonicus HOM05D004869 ORTHO05D005893 0.0e+00 1260.7 819 75.5
Thhalv10020074m.g Eutrema salsugineum HOM05D004869 ORTHO05D005893 0.0e+00 1260.0 824 73.9
Peaxi162Scf00065g01213 Petunia axillaris HOM05D004869 ORTHO05D005893 0.0e+00 1260.0 834 73.4
PSO210G1050 Papaver somniferum HOM05D004869 ORTHO05D005893 0.0e+00 1259.6 829 73.5
Solyc05g054370.2 Solanum lycopersicum HOM05D004869 ORTHO05D005893 0.0e+00 1259.6 832 73.4
Sopen05g032860 Solanum pennellii HOM05D004869 ORTHO05D005893 0.0e+00 1259.2 832 73.3
AL3G17930 Arabidopsis lyrata HOM05D004869 ORTHO05D005893 0.0e+00 1258.8 824 73.3
HanXRQChr17g0535991 Helianthus annuus HOM05D004869 ORTHO05D005893 0.0e+00 1258.8 827 74.5
PSO832G2232 Papaver somniferum HOM05D004869 ORTHO05D005893 0.0e+00 1258.8 834 73.6
PGSC0003DMG400023436 Solanum tuberosum HOM05D004869 ORTHO05D005893 0.0e+00 1257.7 831 73.4
Sopen01g027900 Solanum pennellii HOM05D004869 ORTHO05D005893 0.0e+00 1257.3 834 73.0
Gohir.A02G051000 Gossypium hirsutum HOM05D004869 ORTHO05D005893 0.0e+00 1256.1 828 73.8
Sc19g0005490 Simmondsia chinensis HOM05D004869 ORTHO05D005893 0.0e+00 1255.7 788 77.7
Migut.N00074 Erythranthe guttata HOM05D004869 ORTHO05D005893 0.0e+00 1249.2 830 72.9
Carub.0003s0635 Capsella rubella HOM05D004869 ORTHO05D005893 0.0e+00 1248.8 824 72.9
Aa31LG5G17400 Aethionema arabicum HOM05D004869 ORTHO05D005893 0.0e+00 1248.4 824 73.1
Lalb_Chr15g0086081 Lupinus albus HOM05D004869 ORTHO05D005893 0.0e+00 1247.6 832 73.7
Cc03_g01500 Coffea canephora HOM05D004869 ORTHO05D005893 0.0e+00 1247.3 831 73.4
Solyc01g066310.4 Solanum lycopersicum HOM05D004869 ORTHO05D005893 0.0e+00 1247.3 834 72.5
CARHR081430 Cardamine hirsuta HOM05D004869 ORTHO05D005893 0.0e+00 1246.1 824 72.7
Sp3g05780 Schrenkiella parvula HOM05D004869 ORTHO05D005893 0.0e+00 1240.7 824 73.2
A05p41290 Brassica napus HOM05D004869 ORTHO05D005893 0.0e+00 1240.3 824 72.7
Lsat_1_v5_gn_3_21560 Lactuca sativa HOM05D004869 ORTHO05D005893 0.0e+00 1238.8 871 71.0
C05p60510 Brassica napus HOM05D004869 ORTHO05D005893 0.0e+00 1238.4 823 72.9
Lalb_Chr20g0117401 Lupinus albus HOM05D004869 ORTHO05D005893 0.0e+00 1238.4 832 73.4
BraA05t22852Z Brassica rapa HOM05D004869 ORTHO05D005893 0.0e+00 1238.0 824 72.8
Gohir.D02G055900 Gossypium hirsutum HOM05D004869 ORTHO05D005893 0.0e+00 1237.2 834 72.9
BolC5t34705H Brassica oleracea HOM05D004869 ORTHO05D005893 0.0e+00 1233.0 823 72.7
CDE11G0521 Ceratophyllum demersum HOM05D004869 ORTHO05D005893 0.0e+00 1230.3 834 71.7
EL10Ac3g06663 Beta vulgaris HOM05D004869 ORTHO05D005893 0.0e+00 1229.5 836 71.8
Hund20507 Selenicereus undatus HOM05D004869 ORTHO05D005893 0.0e+00 1229.5 835 72.8
ECA246G3101 Erigeron canadensis HOM05D004869 ORTHO05D005893 0.0e+00 1229.2 832 71.8
Nitab4.5_0000695g0140 Nicotiana tabacum HOM05D004869 ORTHO05D005893 0.0e+00 1225.7 826 73.0
Nitab4.5_0008670g0020 Nicotiana tabacum HOM05D004869 ORTHO05D005893 0.0e+00 1225.7 828 72.7
CAN.G449.73 Capsicum annuum HOM05D004869 ORTHO05D005893 0.0e+00 1225.3 832 71.8
Ca_01910_v3 Cicer arietinum L. HOM05D004869 ORTHO05D005893 0.0e+00 1222.2 814 72.9
DCAR_027053 Daucus carota HOM05D004869 ORTHO05D005893 0.0e+00 1222.2 813 73.9
arahy.Tifrunner.gnm1.ann1.ZXWI6N Arachis hypogaea HOM05D004869 ORTHO05D005893 0.0e+00 1221.1 833 72.3
Lj6A681T39 Lonicera japonica HOM05D004869 ORTHO05D005893 0.0e+00 1218.0 831 72.7
ATR0693G241 Amborella trichopoda HOM05D004869 ORTHO05D005893 0.0e+00 1203.0 833 71.1
Nn3g21544 Nelumbo nucifera HOM05D004869 ORTHO05D005893 0.0e+00 1196.8 779 75.7
Zm00001eb111400 Zea mays HOM05D004869 ORTHO05D005893 0.0e+00 1196.8 836 69.9
Os07g0675000 Oryza sativa ssp. japonica HOM05D004869 ORTHO05D005893 0.0e+00 1179.9 831 69.1
AUR62015247 Chenopodium quinoa HOM05D004869 ORTHO05D005893 0.0e+00 1152.9 835 69.2
SGA_v2.0_scaffold119G32706 Striga asiatica HOM05D004869 ORTHO05D005893 0.0e+00 1147.5 843 67.7
AUR62018045 Chenopodium quinoa HOM05D004869 ORTHO05D005893 0.0e+00 1147.1 835 68.9
HPP92_003120 Vanilla planifolia HOM05D004869 ORTHO05D005893 0.0e+00 1129.8 830 67.6
TAR365G0733 Trochodendron aralioides HOM05D004869 ORTHO05D005893 0.0e+00 1126.7 840 68.7
Eucgr.B01578 Eucalyptus grandis HOM05D004869 ORTHO05D005893 0.0e+00 1119.0 720 74.2
MBI18_g44774_MAGBIO Magnolia biondii HOM05D004869 ORTHO05D005893 0.0e+00 1103.6 802 68.8
Ah.04g153720 Amaranthus hybridus HOM05D004869 ORTHO05D005893 2.8e-311 1071.6 840 65.5
Pp3c18_21710 Physcomitrium patens HOM05D004869 ORTHO05D005893 3.0e-303 1045.0 829 62.5
Pp3c22_4180 Physcomitrium patens HOM05D004869 ORTHO05D005893 1.1e-302 1043.1 835 62.3
Haze_01165 Corylus avellana HOM05D004869 ORTHO05D005893 2.6e-299 1031.9 846 64.1
SMO202G0033 Selaginella moellendorffii HOM05D004869 ORTHO05D005893 3.2e-297 1025.0 827 60.7
arahy.Tifrunner.gnm1.ann1.YH0B1H Arachis hypogaea HOM05D004869 ORTHO05D005893 3.2e-289 998.4 824 63.3
Mapoly0111s0015 Marchantia polymorpha HOM05D004869 ORTHO05D005893 4.7e-285 984.6 821 58.2
SMO169G0300 Selaginella moellendorffii HOM05D004869 ORTHO05D005893 5.3e-260 901.4 839 55.8
AagrBONN_evm.TU.Sc2ySwM_228.2629 Anthoceros agrestis HOM05D004869 ORTHO05D005893 1.3e-255 886.7 710 61.3
SHI00220 Sapria himalayana HOM05D004869 ORTHO05D005893 2.8e-253 879.0 617 69.7
CBR_g54445 Chara braunii HOM05D004869 ORTHO05D005893 2.0e-251 872.8 933 50.9
TPR.G26039 Trifolium pratense HOM05D004869 ORTHO05D005893 2.2e-245 852.8 586 68.8
Medtr2g435800 Medicago truncatula HOM05D004869 ORTHO05D005893 5.2e-223 778.5 572 65.2
DCAR_000477 Daucus carota HOM05D004869 ORTHO05D005893 1.1e-217 760.8 486 75.3
BcaNung06666 Brassica carinata HOM05D004869 ORTHO05D005893 2.3e-215 753.1 488 76.0
Psat1g156400 Pisum sativum HOM05D004869 ORTHO05D005893 8.8e-215 751.1 572 63.5
CSS0035117 Camellia sinensis var. sinensis HOM05D004869 ORTHO05D005893 1.5e-214 750.4 463 79.0
Cre16.g675850 Chlamydomonas reinhardtii HOM05D004869 ORTHO05D005893 1.3e-213 747.3 955 45.0
unitig_26.g10563 Utricularia gibba HOM05D004869 ORTHO05D005893 1.6e-211 740.3 490 73.1
PRCOL_00002960 Prasinoderma coloniale HOM05D004869 ORTHO05D005893 1.5e-182 644.0 799 44.4
Hma1.2p1_0804F.1_g221110 Hydrangea macrophylla HOM05D004869 ORTHO05D005893 1.3e-154 551.2 381 69.3
BcaC05g30559 Brassica carinata HOM05D004869 ORTHO05D005893 3.5e-147 526.6 621 49.8
Oeu031983.1 Olea europaea HOM05D004869 ORTHO05D005893 8.7e-138 495.4 425 60.0
MBI18_g37159_MAGBIO Magnolia biondii HOM05D004869 ORTHO05D005893 1.4e-130 471.5 425 62.4
MCO01G041 Micromonas commoda HOM05D004869 ORTHO05D005893 7.4e-129 465.7 428 56.8
DCAR_023301 Daucus carota HOM05D004869 ORTHO05D005893 8.5e-117 425.6 296 70.6
Cfa024444 Carpinus fangiana HOM05D004869 ORTHO05D005893 8.8e-106 389.0 423 48.2
Medtr2g436030 Medicago truncatula HOM05D004869 ORTHO05D005893 4.4e-105 386.7 230 85.2
QL06p007479 Quercus lobata HOM05D004869 ORTHO05D005893 5.2e-98 363.2 233 77.7
Cfa022681 Carpinus fangiana HOM05D004869 ORTHO05D005893 8.8e-98 362.5 426 44.6
Nn1g04010 Nelumbo nucifera HOM05D004869 ORTHO05D005893 2.4e-87 327.8 190 82.6
Rhsim04G0225600 Rhododendron simsii HOM05D004869 ORTHO05D005893 2.0e-78 298.1 322 52.2
TPR.G13211 Trifolium pratense HOM05D004869 ORTHO05D005893 8.6e-77 292.7 170 87.6
SEGI_30643 Sequoiadendron giganteum HOM05D004869 ORTHO05D005893 6.8e-66 256.5 177 68.4
unitig_26.g10564 Utricularia gibba HOM05D004869 ORTHO05D005893 1.2e-57 229.2 251 48.6
QL93p0200_0027 Quercus lobata HOM05D004869 ORTHO05D005893 2.6e-57 228.0 157 75.2
MCO01G771 Micromonas commoda HOM05D004869 ORTHO05D005893 1.5e-49 202.2 354 36.2
Rhsim04G0225700 Rhododendron simsii HOM05D004869 ORTHO05D005893 3.2e-47 194.5 133 75.2
Lsat_1_v5_gn_3_21640 Lactuca sativa HOM05D004869 ORTHO05D005893 3.6e-43 181.0 138 71.7
RcHm_v2.0_Chr3g0480631 Rosa chinensis HOM05D004869 ORTHO05D005893 1.8e-42 178.7 123 70.7
Rhsim04G0226200 Rhododendron simsii HOM05D004869 ORTHO05D005893 9.9e-41 172.9 150 64.0
RcHm_v2.0_Chr6g0311831 Rosa chinensis HOM05D004869 ORTHO05D005893 5.5e-31 140.6 115 63.5
SEGI_32872 Sequoiadendron giganteum HOM05D004869 ORTHO05D005893 1.3e-29 136.0 89 76.4
Lsat_1_v5_gn_5_23780 Lactuca sativa HOM05D004869 ORTHO05D005893 5.7e-28 130.6 246 37.0
SalBow5G3485 Salvia bowleyana HOM05D004869 ORTHO05D005893 9.0e-26 123.2 69 88.4
MBI18_g46557_MAGBIO Magnolia biondii HOM05D004869 ORTHO05D005893 1.5e-25 122.5 94 69.1
MBI18_g23297_MAGBIO Magnolia biondii HOM05D004869 ORTHO05D005893 2.6e-25 121.7 94 69.1
HanXRQChr01g0024801 Helianthus annuus HOM05D004869 ORTHO05D005893 3.4e-25 121.3 174 38.5
SEGI_25692 Sequoiadendron giganteum HOM05D004869 ORTHO05D005893 1.7e-24 119.0 96 57.3
SMO367G1086 Selaginella moellendorffii HOM05D001528 ORTHO05D006464 8.4e-24 116.7 287 32.1
TPR.G25902 Trifolium pratense HOM05D000002 ORTHO05D000001 1.6e-22 112.5 72 66.7
Haze_26447 Corylus avellana HOM05D001528 ORTHO05D006464 6.1e-22 110.5 356 26.4
BNapus_Darmor_BZH_scaffold_117p00100 Brassica napus HOM05D004869 ORTHO05D005893 7.9e-22 110.2 73 79.5
AagrBONN_evm.TU.Sc2ySwM_117.3343 Anthoceros agrestis HOM05D001528 ORTHO05D006464 3.9e-21 107.8 269 32.0
Zm00001eb265270 Zea mays HOM05D001528 ORTHO05D006464 8.7e-21 106.7 323 26.6
CAN.G65.194 Capsicum annuum HOM05D001528 ORTHO05D006464 1.1e-20 106.3 429 25.2
BolC1t05585H Brassica oleracea HOM05D004869 ORTHO05D005893 1.5e-20 105.9 65 86.2
PGSC0003DMG400026901 Solanum tuberosum HOM05D001528 ORTHO05D006464 3.3e-20 104.8 317 28.1
PGSC0003DMG400027831 Solanum tuberosum HOM05D004869 ORTHO05D005893 4.3e-20 104.4 59 86.4
Atru.chr3.3676 Acer truncatum HOM05D001528 ORTHO05D006464 7.4e-20 103.6 351 27.6
Pp3c3_14940 Physcomitrium patens HOM05D001528 ORTHO05D006464 7.4e-20 103.6 279 29.4
Solyc06g073560.4 Solanum lycopersicum HOM05D001528 ORTHO05D006464 7.4e-20 103.6 317 28.4
Sopen06g029920 Solanum pennellii HOM05D001528 ORTHO05D006464 7.4e-20 103.6 317 28.4
Prupe.6G097600 Prunus persica HOM05D001528 ORTHO05D006464 1.3e-19 102.8 323 25.7
TPR.G15436 Trifolium pratense HOM05D004869 ORTHO05D005893 1.3e-19 102.8 76 67.1
MD03G1116100 Malus domestica HOM05D001528 ORTHO05D006464 3.7e-19 101.3 323 26.0
Lsat_1_v5_gn_2_97920 Lactuca sativa HOM05D001528 ORTHO05D006464 1.8e-18 99.0 322 26.7
Aqoxy4G03235 Aquilegia oxysepala HOM05D001528 ORTHO05D006464 2.4e-18 98.6 323 26.0
Cre06.g296400 Chlamydomonas reinhardtii HOM05D001528 ORTHO05D006464 2.4e-18 98.6 324 26.2
Mapoly0154s0036 Marchantia polymorpha HOM05D001528 ORTHO05D006464 4.1e-18 97.8 282 29.8
ATR0314G031 Amborella trichopoda HOM05D001528 ORTHO05D006464 6.9e-18 97.1 330 25.5
Zm00001eb355050 Zea mays HOM05D001528 ORTHO05D006464 1.5e-17 95.9 258 26.7
Haze_27126 Corylus avellana HOM05D001528 ORTHO05D006464 1.7e-16 92.4 419 22.4
PRCOL_00001565 Prasinoderma coloniale HOM05D001528 ORTHO05D006464 1.7e-16 92.4 285 28.4
BcaC09g47921 Brassica carinata HOM05D004869 ORTHO05D005893 3.8e-16 91.3 57 84.2
Medtr0837s0010 Medicago truncatula HOM05D001528 ORTHO05D006464 1.1e-15 89.7 265 28.3
MCO09G491 Micromonas commoda HOM05D001528 ORTHO05D022264 1.1e-15 89.7 316 25.0
PRCOL_00002017 Prasinoderma coloniale HOM05D001528 ORTHO05D006464 3.6e-14 84.7 300 27.3
Cfa026122 Carpinus fangiana HOM05D001528 ORTHO05D006464 1.4e-13 82.8 287 26.1
Cfa027299 Carpinus fangiana HOM05D001528 ORTHO05D006464 1.4e-13 82.8 304 25.3
Lsat_1_v5_gn_4_34540 Lactuca sativa HOM05D004869 ORTHO05D005893 1.8e-13 82.4 202 31.2
SEGI_08896 Sequoiadendron giganteum HOM05D001528 ORTHO05D006464 2.2e-11 75.5 254 26.0
PRCOL_00006254 Prasinoderma coloniale HOM05D001528 ORTHO05D006464 1.1e-10 73.2 291 24.4
PRCOL_00005382 Prasinoderma coloniale HOM05D001528 ORTHO05D022264 3.8e-08 64.7 253 27.3
Hma1.2p1_1662F.1_g296280 Hydrangea macrophylla HOM05D004869 ORTHO05D005893 7.9e-06 57.0 53 56.6


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