Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G052400 Populus trichocarpa HOM05D006356 ORTHO05D007903 0.0e+00 2600.5 1324 100.0
Sabra08G0037700 Salix brachista HOM05D006356 ORTHO05D007903 0.0e+00 2457.2 1324 94.7
Potri.010G208400 Populus trichocarpa HOM05D006356 ORTHO05D007903 0.0e+00 2322.7 1326 88.4
QL08p059009 Quercus lobata HOM05D006356 ORTHO05D007903 0.0e+00 1955.3 1323 73.3
Haze_17035 Corylus avellana HOM05D006356 ORTHO05D007903 0.0e+00 1925.2 1332 71.9
Cfa001508 Carpinus fangiana HOM05D006356 ORTHO05D007903 0.0e+00 1917.1 1332 71.8
TWI38G0752 Tripterygium wilfordii HOM05D006356 ORTHO05D007903 0.0e+00 1879.4 1326 71.3
Thecc.10G046600 Theobroma cacao HOM05D006356 ORTHO05D007903 0.0e+00 1877.4 1331 71.6
Duzib106G0492 Durio zibethinus HOM05D006356 ORTHO05D007903 0.0e+00 1864.7 1329 70.9
Gohir.D10G224900 Gossypium hirsutum HOM05D006356 ORTHO05D007903 0.0e+00 1858.6 1328 71.0
Gorai.011G255900 Gossypium raimondii HOM05D006356 ORTHO05D007903 0.0e+00 1853.2 1330 70.7
CANSAT56G2020 Cannabis sativa HOM05D006356 ORTHO05D007903 0.0e+00 1851.6 1327 70.6
Prupe.2G231100 Prunus persica HOM05D006356 ORTHO05D007903 0.0e+00 1843.6 1324 70.3
CSS0015977 Camellia sinensis var. sinensis HOM05D006356 ORTHO05D007903 0.0e+00 1842.4 1334 69.7
Ciclev10030528m.g Citrus clementina HOM05D006356 ORTHO05D007903 0.0e+00 1841.2 1328 70.5
Actinidia07718 Actinidia chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1827.4 1334 68.5
Atru.BG.253.p Acer truncatum HOM05D006356 ORTHO05D007903 0.0e+00 1826.6 1248 73.8
RcHm_v2.0_Chr1g0366221 Rosa chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1821.2 1326 69.5
FvH4_7g21920 Fragaria vesca HOM05D006356 ORTHO05D007903 0.0e+00 1818.5 1328 69.1
MD07G1193500 Malus domestica HOM05D006356 ORTHO05D007903 0.0e+00 1818.5 1329 69.1
FAN06G1346 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1816.6 1328 69.1
FAN01G2014 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1816.2 1328 69.0
TAR369G0783 Trochodendron aralioides HOM05D006356 ORTHO05D007903 0.0e+00 1815.8 1332 68.6
FAN03G2412 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1815.4 1328 68.9
FAN10G4053 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1806.2 1328 68.8
LjContig00357g0007551 Lotus japonicus HOM05D006356 ORTHO05D007903 0.0e+00 1796.9 1321 66.9
PGR044G1537 Punica granatum HOM05D006356 ORTHO05D007903 0.0e+00 1791.9 1326 67.2
Rhsim09G0107200 Rhododendron simsii HOM05D006356 ORTHO05D007903 0.0e+00 1791.2 1331 67.8
MD01G1123800 Malus domestica HOM05D006356 ORTHO05D007903 0.0e+00 1786.2 1326 68.3
Gohir.A10G215900 Gossypium hirsutum HOM05D006356 ORTHO05D007903 0.0e+00 1780.8 1247 72.1
Lj8C87G2 Lonicera japonica HOM05D006356 ORTHO05D007903 0.0e+00 1769.2 1328 66.9
Lalb_Chr21g0307391 Lupinus albus HOM05D006356 ORTHO05D007903 0.0e+00 1769.2 1327 66.6
arahy.Tifrunner.gnm1.ann1.C821YF Arachis hypogaea HOM05D006356 ORTHO05D007903 0.0e+00 1759.2 1326 66.0
FAN06G1693 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1741.1 1246 69.9
Medtr1g115300 Medicago truncatula HOM05D006356 ORTHO05D007903 0.0e+00 1741.1 1326 66.1
ClCG09G020060 Citrullus lanatus HOM05D006356 ORTHO05D007903 0.0e+00 1729.5 1322 65.8
MELO3C025450.2 Cucumis melo HOM05D006356 ORTHO05D007903 0.0e+00 1727.2 1324 65.3
Psat2g006960 Pisum sativum HOM05D006356 ORTHO05D007903 0.0e+00 1724.9 1328 65.7
Glyma.10G289800 Glycine max HOM05D006356 ORTHO05D007903 0.0e+00 1724.1 1326 65.7
Nn2g12928 Nelumbo nucifera HOM05D006356 ORTHO05D007903 0.0e+00 1716.8 1337 63.9
Peaxi162Scf00015g01616 Petunia axillaris HOM05D006356 ORTHO05D007903 0.0e+00 1714.9 1324 65.4
vmacro07156 Vaccinium macrocarpon HOM05D006356 ORTHO05D007903 0.0e+00 1712.6 1274 66.7
Solyc05g054630.4 Solanum lycopersicum HOM05D006356 ORTHO05D007903 0.0e+00 1712.2 1328 65.4
Manes.07G113200 Manihot esculenta HOM05D006356 ORTHO05D007903 0.0e+00 1711.8 1100 77.1
PGSC0003DMG400023520 Solanum tuberosum HOM05D006356 ORTHO05D007903 0.0e+00 1711.0 1324 65.4
Nitab4.5_0001831g0090 Nicotiana tabacum HOM05D006356 ORTHO05D007903 0.0e+00 1706.0 1323 65.7
CAN.G1013.4 Capsicum annuum HOM05D006356 ORTHO05D007903 0.0e+00 1705.3 1324 65.0
TPR.G13985 Trifolium pratense HOM05D006356 ORTHO05D007903 0.0e+00 1705.3 1329 65.3
Nitab4.5_0006342g0010 Nicotiana tabacum HOM05D006356 ORTHO05D007903 0.0e+00 1702.2 1346 64.4
VMungo0720G2582 Vigna mungo HOM05D006356 ORTHO05D007903 0.0e+00 1702.2 1325 65.0
Ca_11290_v3 Cicer arietinum L. HOM05D006356 ORTHO05D007903 0.0e+00 1700.3 1254 68.1
Eucgr.J00045 Eucalyptus grandis HOM05D006356 ORTHO05D007903 0.0e+00 1697.2 1329 65.1
EL10Ac2g03426 Beta vulgaris HOM05D006356 ORTHO05D007903 0.0e+00 1695.6 1338 63.7
MBI14_g24317_MAGBIO Magnolia biondii HOM05D006356 ORTHO05D007903 0.0e+00 1692.2 1339 64.6
AUR62040952 Chenopodium quinoa HOM05D006356 ORTHO05D007903 0.0e+00 1691.4 1330 64.1
Ah.16g107390 Amaranthus hybridus HOM05D006356 ORTHO05D007903 0.0e+00 1688.7 1329 63.9
THA.LOC104799353 Tarenaya hassleriana HOM05D006356 ORTHO05D007903 0.0e+00 1677.9 1325 64.4
Cc02_g08190 Coffea canephora HOM05D006356 ORTHO05D007903 0.0e+00 1673.7 1324 63.4
DCAR_027666 Daucus carota HOM05D006356 ORTHO05D007903 0.0e+00 1672.9 1326 63.5
Sc20g0002610 Simmondsia chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1672.9 1335 63.0
PSO675G9381 Papaver somniferum HOM05D006356 ORTHO05D007903 0.0e+00 1660.6 1333 63.3
Atru.chr12.503 Acer truncatum HOM05D006356 ORTHO05D007903 0.0e+00 1655.6 1098 75.8
GSVIVG01016590001 Vitis vinifera HOM05D006356 ORTHO05D007903 0.0e+00 1655.6 1324 64.5
Sopen05g033110 Solanum pennellii HOM05D006356 ORTHO05D007903 0.0e+00 1651.3 1247 66.6
PSO541G4186 Papaver somniferum HOM05D006356 ORTHO05D007903 0.0e+00 1646.7 1340 62.2
Hund20019 Selenicereus undatus HOM05D006356 ORTHO05D007903 0.0e+00 1627.1 1273 64.7
Aqoxy4G02989 Aquilegia oxysepala HOM05D006356 ORTHO05D007903 0.0e+00 1625.5 1344 61.5
Sp6g30340 Schrenkiella parvula HOM05D006356 ORTHO05D007903 0.0e+00 1621.7 1332 62.0
AL6G24290 Arabidopsis lyrata HOM05D006356 ORTHO05D007903 0.0e+00 1619.8 1330 62.5
Thhalv10012453m.g Eutrema salsugineum HOM05D006356 ORTHO05D007903 0.0e+00 1619.4 1330 61.8
C09p63420 Brassica napus HOM05D006356 ORTHO05D007903 0.0e+00 1613.6 1333 62.1
Carub.0006s1184 Capsella rubella HOM05D006356 ORTHO05D007903 0.0e+00 1613.6 1330 62.5
A10p24610 Brassica napus HOM05D006356 ORTHO05D007903 0.0e+00 1603.6 1333 61.4
BolC9t59188H Brassica oleracea HOM05D006356 ORTHO05D007903 0.0e+00 1603.2 1334 61.5
BraA10t44524Z Brassica rapa HOM05D006356 ORTHO05D007903 0.0e+00 1603.2 1333 61.4
AT5G13680 Arabidopsis thaliana HOM05D006356 ORTHO05D007903 0.0e+00 1599.3 1330 61.6
Migut.H00419 Erythranthe guttata HOM05D006356 ORTHO05D007903 0.0e+00 1586.2 1329 61.0
ECA233G4627 Erigeron canadensis HOM05D006356 ORTHO05D007903 0.0e+00 1568.9 1331 61.6
Aa31sc144G30 Aethionema arabicum HOM05D006356 ORTHO05D007903 0.0e+00 1564.3 1361 59.2
HanXRQChr08g0220321 Helianthus annuus HOM05D006356 ORTHO05D007903 0.0e+00 1562.0 1329 60.7
SGA_v2.0_scaffold204G41568 Striga asiatica HOM05D006356 ORTHO05D007903 0.0e+00 1558.5 1324 59.8
AUR62038374 Chenopodium quinoa HOM05D006356 ORTHO05D007903 0.0e+00 1551.2 1192 65.2
Lsat_1_v5_gn_8_16481 Lactuca sativa HOM05D006356 ORTHO05D007903 0.0e+00 1542.7 1331 60.2
Dinv31432 Davidia involucrata HOM05D006356 ORTHO05D007903 0.0e+00 1542.3 1283 63.7
Phvul.007G011700 Phaseolus vulgaris HOM05D006356 ORTHO05D007903 0.0e+00 1512.3 1133 66.5
BcaC04g24267 Brassica carinata HOM05D006356 ORTHO05D007903 0.0e+00 1509.2 1328 59.2
CsaV3_5G026400 Cucumis sativus L. HOM05D006356 ORTHO05D007903 0.0e+00 1491.9 1115 66.8
Os07g0563700 Oryza sativa ssp. japonica HOM05D006356 ORTHO05D007903 0.0e+00 1479.9 1336 56.7
Sed0005812 Sechium edule HOM05D006356 ORTHO05D007903 0.0e+00 1461.8 1093 67.4
CARHR199760 Cardamine hirsuta HOM05D006356 ORTHO05D007903 0.0e+00 1437.9 1152 63.5
Zm00001eb082380 Zea mays HOM05D006356 ORTHO05D007903 0.0e+00 1433.7 1321 54.9
COL.COLO4_14974 Corchorus olitorius HOM05D006356 ORTHO05D007903 0.0e+00 1407.1 1326 57.8
Oeu016021.3 Olea europaea HOM05D006356 ORTHO05D007903 0.0e+00 1375.9 1560 48.7
HPP92_012583 Vanilla planifolia HOM05D006356 ORTHO05D007903 0.0e+00 1370.5 1320 54.8
ATR0559G370 Amborella trichopoda HOM05D006356 ORTHO05D007903 0.0e+00 1364.0 1351 53.6
CiPaw.01G284000 Carya illinoinensis HOM05D006356 ORTHO05D007903 0.0e+00 1333.9 946 69.9
Cpa.g.sc1.373 Carica papaya HOM05D006356 ORTHO05D007903 0.0e+00 1238.0 905 68.1
Hma1.2p1_0533F.1_g173660 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 0.0e+00 1198.3 865 69.4
CDE04G3644 Ceratophyllum demersum HOM05D006356 ORTHO05D007903 0.0e+00 1192.6 1335 51.0
SEGI_26197 Sequoiadendron giganteum HOM05D006356 ORTHO05D007903 0.0e+00 1149.4 1254 49.8
Hma1.2p1_0533F.1_g173650 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 0.0e+00 1091.6 756 72.0
Mapoly0015s0194 Marchantia polymorpha HOM05D006356 ORTHO05D007903 1.7e-252 877.1 1368 38.2
AagrBONN_evm.TU.Sc2ySwM_362.1673 Anthoceros agrestis HOM05D006356 ORTHO05D007903 7.5e-240 835.1 1195 40.2
SMO352G0087 Selaginella moellendorffii HOM05D006356 ORTHO05D007903 3.7e-239 832.8 1304 39.3
unitig_736.g22670 Utricularia gibba HOM05D006356 ORTHO05D007903 7.5e-232 808.5 853 48.5
Pp3c8_3890 Physcomitrium patens HOM05D006356 ORTHO05D007903 5.9e-229 798.9 1157 40.8
SEGI_10512 Sequoiadendron giganteum HOM05D006356 ORTHO05D007903 9.5e-219 765.0 808 52.2
CBR_g230 Chara braunii HOM05D006356 ORTHO05D007903 1.3e-164 585.1 1496 30.4
Cpa.g.sc1.372 Carica papaya HOM05D006356 ORTHO05D007903 6.7e-140 503.1 358 70.1
unitig_736.g22669 Utricularia gibba HOM05D006356 ORTHO05D007903 6.3e-138 496.5 460 58.0
arahy.Tifrunner.gnm1.ann1.1A0WRJ Arachis hypogaea HOM05D006356 ORTHO05D007903 2.7e-133 481.1 376 62.8
MCO05G525 Micromonas commoda HOM05D006356 ORTHO05D007903 5.1e-95 354.0 1369 27.0
Cre08.g372500 Chlamydomonas reinhardtii HOM05D006356 ORTHO05D007903 9.5e-94 349.7 1580 25.8
Actinidia02967 Actinidia chinensis HOM05D006356 ORTHO05D007903 6.2e-85 320.5 331 53.5
Psat2g034240 Pisum sativum HOM05D006356 ORTHO05D007903 7.8e-80 303.5 303 53.8
Nn4g26017 Nelumbo nucifera HOM05D006356 ORTHO05D007903 1.2e-77 296.2 249 56.2
Hma1.2p1_0529F.1_g173120 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 4.5e-67 261.2 196 69.9
TAR225G0003 Trochodendron aralioides HOM05D002467 ORTHO05D003907 1.1e-62 246.5 1276 24.6
PRCOL_00001522 Prasinoderma coloniale HOM05D006356 ORTHO05D007903 1.3e-58 233.0 1354 25.9
Psat0s3149g0040 Pisum sativum HOM05D006356 ORTHO05D007903 6.4e-58 230.7 233 53.2
Psat0s3149g0080 Pisum sativum HOM05D006356 ORTHO05D007903 1.8e-55 222.6 224 54.5
Hma1.2p1_0248F.1_g102020 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 9.0e-52 210.3 167 66.5
Psat6g224200 Pisum sativum HOM05D006356 ORTHO05D007903 3.2e-41 175.3 129 70.5
Psat0s4636g0040 Pisum sativum HOM05D006356 ORTHO05D007903 2.0e-38 166.0 125 69.6
Lj5g0016728 Lotus japonicus HOM05D006356 ORTHO05D007903 4.3e-38 164.9 289 41.5
AUR62038375 Chenopodium quinoa HOM05D006356 ORTHO05D007903 3.3e-30 138.7 139 53.2


User provided reference genes

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