Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G019800 Populus trichocarpa HOM05D005598 ORTHO05D006587 9.4e-167 590.1 298 100.0
Sabra08G0013100 Salix brachista HOM05D005598 ORTHO05D006587 1.2e-158 563.1 299 94.6
CSS0000091 Camellia sinensis var. sinensis HOM05D005598 ORTHO05D006587 1.7e-144 516.2 298 87.2
QL04p046731 Quercus lobata HOM05D005598 ORTHO05D006587 3.9e-144 515.0 296 85.5
TAR636G1340 Trochodendron aralioides HOM05D005598 ORTHO05D006587 3.3e-143 511.9 298 86.2
GSVIVG01010722001 Vitis vinifera HOM05D005598 ORTHO05D006587 3.6e-142 508.4 298 85.2
CsaV3_4G003460 Cucumis sativus L. HOM05D005598 ORTHO05D006587 2.3e-141 505.8 298 83.2
Cc02_g09610 Coffea canephora HOM05D005598 ORTHO05D006587 4.0e-141 505.0 298 84.2
Rhsim09G0141700 Rhododendron simsii HOM05D005598 ORTHO05D006587 3.4e-140 501.9 298 84.6
MD02G1261600 Malus domestica HOM05D005598 ORTHO05D006587 5.8e-140 501.1 297 82.5
PGR142G4231 Punica granatum HOM05D005598 ORTHO05D006587 7.5e-140 500.7 302 84.8
CiPaw.13G040600 Carya illinoinensis HOM05D005598 ORTHO05D006587 1.7e-139 499.6 298 82.6
MELO3C017716.2 Cucumis melo HOM05D005598 ORTHO05D006587 2.9e-139 498.8 298 82.2
Haze_03295 Corylus avellana HOM05D005598 ORTHO05D006587 8.3e-139 497.3 309 82.5
Nn6g34854 Nelumbo nucifera HOM05D005598 ORTHO05D006587 1.1e-138 496.9 299 83.6
Lj2C33T4 Lonicera japonica HOM05D005598 ORTHO05D006587 1.9e-138 496.1 293 84.6
TWI38G0756 Tripterygium wilfordii HOM05D005598 ORTHO05D006587 1.9e-138 496.1 298 83.2
RcHm_v2.0_Chr5g0049931 Rosa chinensis HOM05D005598 ORTHO05D006587 5.4e-138 494.6 298 82.2
Atru.chr12.1043 Acer truncatum HOM05D005598 ORTHO05D006587 9.2e-138 493.8 292 82.5
Eucgr.G02689 Eucalyptus grandis HOM05D005598 ORTHO05D006587 9.2e-138 493.8 298 82.6
Duzib128G1802 Durio zibethinus HOM05D005598 ORTHO05D006587 4.6e-137 491.5 298 82.2
Hund06785 Selenicereus undatus HOM05D005598 ORTHO05D006587 3.0e-136 488.8 299 82.6
Thecc.10G109100 Theobroma cacao HOM05D005598 ORTHO05D006587 3.0e-136 488.8 297 82.2
Nitab4.5_0003590g0030 Nicotiana tabacum HOM05D005598 ORTHO05D006587 3.9e-136 488.4 298 81.2
ClCG07G015650 Citrullus lanatus HOM05D005598 ORTHO05D006587 1.1e-135 486.9 329 74.8
Sopen11g002760 Solanum pennellii HOM05D005598 ORTHO05D006587 1.5e-135 486.5 298 80.9
Peaxi162Scf00173g00110 Petunia axillaris HOM05D005598 ORTHO05D006587 1.9e-135 486.1 298 80.9
Oeu024809.1 Olea europaea HOM05D005598 ORTHO05D006587 3.3e-135 485.3 331 74.3
Solyc11g006860.2 Solanum lycopersicum HOM05D005598 ORTHO05D006587 3.3e-135 485.3 298 80.9
Sed0022725 Sechium edule HOM05D005598 ORTHO05D006587 5.6e-135 484.6 298 79.5
CANSAT56G2222 Cannabis sativa HOM05D005598 ORTHO05D006587 9.5e-135 483.8 298 80.2
Ca_25662_v3 Cicer arietinum L. HOM05D005598 ORTHO05D006587 9.5e-135 483.8 299 80.3
Phvul.007G022800 Phaseolus vulgaris HOM05D005598 ORTHO05D006587 1.2e-134 483.4 296 81.4
Lj5g0018811 Lotus japonicus HOM05D005598 ORTHO05D006587 2.1e-134 482.6 298 80.5
Gorai.009G304000 Gossypium raimondii HOM05D005598 ORTHO05D006587 2.8e-134 482.3 299 81.3
FAN11G2626 Fragaria x ananassa HOM05D005598 ORTHO05D006587 3.6e-134 481.9 298 80.5
EL10Ac4g08688 Beta vulgaris HOM05D005598 ORTHO05D006587 4.7e-134 481.5 299 79.9
Gohir.D05G288900 Gossypium hirsutum HOM05D005598 ORTHO05D006587 4.7e-134 481.5 299 80.9
HanXRQChr11g0342091 Helianthus annuus HOM05D005598 ORTHO05D006587 4.7e-134 481.5 298 80.9
arahy.Tifrunner.gnm1.ann1.8DLZ0X Arachis hypogaea HOM05D005598 ORTHO05D006587 6.2e-134 481.1 297 78.1
Gohir.A05G287700 Gossypium hirsutum HOM05D005598 ORTHO05D006587 6.2e-134 481.1 299 80.9
Manes.10G062100 Manihot esculenta HOM05D005598 ORTHO05D006587 6.2e-134 481.1 278 85.6
arahy.Tifrunner.gnm1.ann1.L8YGTT Arachis hypogaea HOM05D005598 ORTHO05D006587 1.1e-133 480.3 298 78.5
Ciclev10016103m.g Citrus clementina HOM05D005598 ORTHO05D006587 1.1e-133 480.3 298 78.9
PGSC0003DMG400023970 Solanum tuberosum HOM05D005598 ORTHO05D006587 1.1e-133 480.3 298 79.9
DCAR_006354 Daucus carota HOM05D005598 ORTHO05D006587 1.8e-133 479.6 298 80.2
PSO339G6152 Papaver somniferum HOM05D005598 ORTHO05D006587 1.8e-133 479.6 292 81.5
MSTRG.23901 Avicennia marina HOM05D005598 ORTHO05D006587 2.3e-133 479.2 293 80.5
CAN.G645.19 Capsicum annuum HOM05D005598 ORTHO05D006587 2.3e-133 479.2 298 80.2
FvH4_3g27560 Fragaria vesca HOM05D005598 ORTHO05D006587 3.1e-133 478.8 298 80.2
Sc09g0005330 Simmondsia chinensis HOM05D005598 ORTHO05D006587 4.0e-133 478.4 295 80.0
THA.LOC104824207 Tarenaya hassleriana HOM05D005598 ORTHO05D006587 4.0e-133 478.4 298 79.5
VMungo0720G0111 Vigna mungo HOM05D005598 ORTHO05D006587 4.0e-133 478.4 295 80.0
Migut.F01603 Erythranthe guttata HOM05D005598 ORTHO05D006587 1.5e-132 476.5 291 80.8
Lsat_1_v5_gn_2_104400 Lactuca sativa HOM05D005598 ORTHO05D006587 1.5e-132 476.5 293 79.9
Aqoxy4G02744 Aquilegia oxysepala HOM05D005598 ORTHO05D006587 2.0e-132 476.1 292 79.8
TPR.G2473 Trifolium pratense HOM05D005598 ORTHO05D006587 2.6e-132 475.7 298 78.5
SalBow6G5745 Salvia bowleyana HOM05D005598 ORTHO05D006587 7.5e-132 474.2 293 80.5
Medtr1g111980 Medicago truncatula HOM05D005598 ORTHO05D006587 9.8e-132 473.8 299 78.6
AUR62042081 Chenopodium quinoa HOM05D005598 ORTHO05D006587 8.3e-131 470.7 293 79.5
Lalb_Chr02g0146251 Lupinus albus HOM05D005598 ORTHO05D006587 1.1e-130 470.3 297 79.8
CDE08G1414 Ceratophyllum demersum HOM05D005598 ORTHO05D006587 1.4e-130 469.9 294 77.9
Sp4g04110 Schrenkiella parvula HOM05D005598 ORTHO05D006587 1.6e-129 466.5 298 76.8
Nitab4.5_0002586g0090 Nicotiana tabacum HOM05D005598 ORTHO05D006587 2.1e-129 466.1 333 72.7
FAN16G3025 Fragaria x ananassa HOM05D005598 ORTHO05D006587 2.3e-128 462.6 298 77.9
Aa31LG7G12150 Aethionema arabicum HOM05D005598 ORTHO05D006587 3.0e-128 462.2 298 76.5
ATR0820G296 Amborella trichopoda HOM05D005598 ORTHO05D006587 3.0e-128 462.2 290 76.9
AT2G25100 Arabidopsis thaliana HOM05D005598 ORTHO05D006587 1.1e-127 460.3 298 74.5
BcaB06g28035 Brassica carinata HOM05D005598 ORTHO05D006587 1.5e-127 459.9 291 76.6
vmacro10312 Vaccinium macrocarpon HOM05D005598 ORTHO05D006587 1.5e-127 459.9 298 77.9
BraA04t17544Z Brassica rapa HOM05D005598 ORTHO05D006587 1.9e-127 459.5 291 76.6
BcaC02g08374 Brassica carinata HOM05D005598 ORTHO05D006587 3.3e-127 458.8 291 76.3
A04p19500 Brassica napus HOM05D005598 ORTHO05D006587 3.3e-127 458.8 291 76.3
C04p55060 Brassica napus HOM05D005598 ORTHO05D006587 3.3e-127 458.8 291 76.3
BolC4t27046H Brassica oleracea HOM05D005598 ORTHO05D006587 3.3e-127 458.8 291 76.3
Carub.0004s0468 Capsella rubella HOM05D005598 ORTHO05D006587 5.6e-127 458.0 298 74.8
ECA238G1649 Erigeron canadensis HOM05D005598 ORTHO05D006587 9.5e-127 457.2 300 77.3
COL.COLO4_38547 Corchorus olitorius HOM05D005598 ORTHO05D006587 2.1e-126 456.1 282 80.5
CARHR116600 Cardamine hirsuta HOM05D005598 ORTHO05D006587 1.5e-124 449.9 298 73.2
Os11g0153900 Oryza sativa ssp. japonica HOM05D005598 ORTHO05D006587 3.4e-124 448.7 294 74.5
HPP92_000055 Vanilla planifolia HOM05D005598 ORTHO05D006587 5.8e-124 448.0 293 75.4
TWI63G1098 Tripterygium wilfordii HOM05D005598 ORTHO05D006587 7.6e-124 447.6 298 77.5
CSS0039611 Camellia sinensis var. sinensis HOM05D005598 ORTHO05D006587 9.9e-124 447.2 311 75.2
Actinidia34728 Actinidia chinensis HOM05D005598 ORTHO05D006587 3.9e-120 435.3 249 85.1
Dinv11826 Davidia involucrata HOM05D005598 ORTHO05D006587 1.9e-119 433.0 268 83.2
Dinv10930 Davidia involucrata HOM05D005598 ORTHO05D006587 3.3e-119 432.2 239 88.3
SGA_v2.0_scaffold62G21319 Striga asiatica HOM05D005598 ORTHO05D006587 4.0e-117 425.2 272 77.9
Glyma.10G278500 Glycine max HOM05D005598 ORTHO05D006587 3.4e-116 422.2 270 80.0
SEGI_12354 Sequoiadendron giganteum HOM05D005598 ORTHO05D006587 9.9e-116 420.6 291 70.8
unitig_736.g22318 Utricularia gibba HOM05D005598 ORTHO05D006587 1.3e-115 420.2 294 72.1
Thhalv10000575m.g Eutrema salsugineum HOM05D005598 ORTHO05D006587 1.2e-113 413.7 291 70.1
Prupe.2G069600 Prunus persica HOM05D005598 ORTHO05D006587 7.8e-113 411.0 237 83.1
PSO801G0206 Papaver somniferum HOM05D005598 ORTHO05D006587 8.7e-112 407.5 231 84.4
MBI01_g02157_MAGBIO Magnolia biondii HOM05D005598 ORTHO05D006587 4.4e-108 395.2 247 80.6
Zm00001eb406890 Zea mays HOM05D005598 ORTHO05D006587 9.9e-108 394.0 267 72.3
Cpa.g.c34135 Carica papaya HOM05D005598 ORTHO05D006587 1.1e-106 390.6 222 84.7
Psat0s4121g0080 Pisum sativum HOM05D005598 ORTHO05D006587 6.4e-99 364.8 238 75.6
Pp3c13_7860 Physcomitrium patens HOM05D005598 ORTHO05D006587 5.8e-92 341.7 295 58.3
Mapoly0006s0052 Marchantia polymorpha HOM05D005598 ORTHO05D006587 3.2e-90 335.9 294 55.8
AagrBONN_evm.TU.Sc2ySwM_362.477 Anthoceros agrestis HOM05D005598 ORTHO05D006587 1.8e-88 330.1 286 57.7
AL4G16260 Arabidopsis lyrata HOM05D005598 ORTHO05D006587 1.8e-85 320.1 208 76.0
DCAR_006363 Daucus carota HOM05D005598 ORTHO05D006587 2.4e-85 319.7 282 65.6
AUR62041514 Chenopodium quinoa HOM05D005598 ORTHO05D006587 7.6e-84 314.7 410 46.3
SMO347G0320 Selaginella moellendorffii HOM05D005598 ORTHO05D006587 6.5e-67 258.5 272 51.1
CiPaw.14G033400 Carya illinoinensis HOM05D005598 ORTHO05D006587 9.7e-63 244.6 258 58.5
Lalb_Chr21g0309151 Lupinus albus HOM05D005598 ORTHO05D006587 1.3e-59 234.2 153 78.4
Cre17.g701350 Chlamydomonas reinhardtii HOM05D005598 ORTHO05D006587 6.3e-54 215.3 292 40.4
Haze_26455 Corylus avellana HOM05D005598 ORTHO05D006587 4.1e-53 212.6 259 44.8
Ah.04g160180 Amaranthus hybridus HOM05D005598 ORTHO05D006587 6.5e-51 205.3 119 84.9
Psat4g059000 Pisum sativum HOM05D005598 ORTHO05D006587 5.5e-50 202.2 116 78.4
CBR_g29781 Chara braunii HOM05D005598 ORTHO05D006587 1.5e-47 194.1 190 54.2
Glyma.07G162800 Glycine max HOM05D005598 ORTHO05D006587 1.8e-45 187.2 219 51.6
MD02G1261400 Malus domestica HOM05D005598 ORTHO05D006587 4.4e-39 166.0 175 54.9
Cfa026153 Carpinus fangiana HOM05D005598 ORTHO05D006587 8.6e-35 151.8 263 39.5
HanXRQChr05g0158341 Helianthus annuus HOM05D005598 ORTHO05D006587 1.6e-33 147.5 111 67.6
Psat0s449g0080 Pisum sativum HOM05D000909 ORTHO05D000928 2.0e-28 130.6 75 80.0
Zm00001eb407010 Zea mays HOM05D005598 ORTHO05D006587 2.5e-26 123.6 81 76.5
Psat0s1058g0040 Pisum sativum HOM05D005598 ORTHO05D006587 2.3e-19 100.5 52 90.4
Lsat_1_v5_gn_9_94660 Lactuca sativa HOM05D005598 ORTHO05D006587 2.5e-18 97.1 60 78.3
SEGI_12669 Sequoiadendron giganteum HOM05D005598 ORTHO05D006587 1.6e-17 94.4 48 83.3
Psat4g071240 Pisum sativum HOM05D005598 ORTHO05D006587 8.9e-16 88.6 190 37.4
Psat5g185320 Pisum sativum HOM05D000559 ORTHO05D006587 8.9e-16 88.6 52 75.0
Sabra10G0187600 Salix brachista HOM05D005598 ORTHO05D006587 5.8e-15 85.9 152 40.1
Psat5g299440 Pisum sativum HOM05D005598 ORTHO05D006587 1.3e-14 84.7 146 38.4
MBI01_g19134_MAGBIO Magnolia biondii HOM05D005598 ORTHO05D006587 3.7e-14 83.2 47 80.9
Lalb_Chr21g0309141 Lupinus albus HOM05D005598 ORTHO05D006587 2.4e-13 80.5 54 72.2
Lalb_Chr21g0309161 Lupinus albus HOM05D005598 ORTHO05D006587 1.9e-10 70.9 59 67.8
Potri.010G239500 Populus trichocarpa HOM05D005598 ORTHO05D006587 1.2e-09 68.2 59 67.8
Mapoly0023s0164 Marchantia polymorpha HOM05D016613 ORTHO05D014817 3.1e-08 63.5 181 31.5
Pp3c2_19600 Physcomitrium patens HOM05D016613 ORTHO05D014817 3.1e-08 63.5 170 29.4
MCO01G455 Micromonas commoda HOM05D016613 ORTHO05D014817 6.8e-08 62.4 170 32.4
Cre13.g561900 Chlamydomonas reinhardtii HOM05D016613 ORTHO05D014817 1.5e-07 61.2 160 31.2
Psat6g162040 Pisum sativum HOM05D005598 ORTHO05D006587 4.4e-07 59.7 83 45.8
Psat7g021760 Pisum sativum HOM05D000559 ORTHO05D000596 9.9e-07 58.5 28 82.1
Actinidia27053 Actinidia chinensis HOM05D005215 ORTHO05D006382 1.3e-06 58.2 54 63.0
SMO118G0286 Selaginella moellendorffii HOM05D016613 ORTHO05D014817 3.8e-06 56.6 170 27.6
A09p55890 Brassica napus HOM05D005598 ORTHO05D040595 4.9e-06 56.2 50 54.0
BraA09t40992Z Brassica rapa HOM05D005598 ORTHO05D040595 4.9e-06 56.2 50 54.0


User provided reference genes

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