Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G094800 Populus trichocarpa HOM05D007241 ORTHO05D009142 3.5e-189 664.8 343 100.0
Sabra06G0072600 Salix brachista HOM05D007241 ORTHO05D009142 1.2e-176 623.2 343 93.6
Manes.08G083700 Manihot esculenta HOM05D007241 ORTHO05D009142 4.3e-123 445.3 344 70.1
Duzib106G0374 Durio zibethinus HOM05D007241 ORTHO05D009142 4.5e-120 435.3 351 67.2
Thecc.05G024800 Theobroma cacao HOM05D007241 ORTHO05D009142 7.6e-120 434.5 351 67.2
Gohir.D04G127300 Gossypium hirsutum HOM05D007241 ORTHO05D009142 9.3e-118 427.6 365 64.4
Gorai.012G110300 Gossypium raimondii HOM05D007241 ORTHO05D009142 2.1e-117 426.4 359 64.9
Duzib093G2007 Durio zibethinus HOM05D007241 ORTHO05D009142 3.9e-116 422.2 351 65.8
Cpa.g.sc56.88 Carica papaya HOM05D007241 ORTHO05D009142 1.3e-114 417.2 348 64.4
PGR004G2498 Punica granatum HOM05D007241 ORTHO05D009142 2.6e-112 409.5 345 64.6
GSVIVG01034032001 Vitis vinifera HOM05D007241 ORTHO05D009142 4.2e-110 402.1 350 64.6
Prupe.6G268100 Prunus persica HOM05D007241 ORTHO05D009142 5.5e-110 401.7 342 64.0
Ciclev10012141m.g Citrus clementina HOM05D007241 ORTHO05D009142 7.1e-110 401.4 345 65.2
Atru.chr8.2123 Acer truncatum HOM05D007241 ORTHO05D009142 9.3e-110 401.0 347 64.0
CSS0004399 Camellia sinensis var. sinensis HOM05D007241 ORTHO05D009142 1.3e-108 397.1 359 60.7
FAN05G2185 Fragaria x ananassa HOM05D007241 ORTHO05D009142 1.1e-107 394.0 342 62.9
TWI74G0988 Tripterygium wilfordii HOM05D007241 ORTHO05D009142 9.7e-107 391.0 348 63.5
RcHm_v2.0_Chr3g0464151 Rosa chinensis HOM05D007241 ORTHO05D009142 1.6e-106 390.2 344 61.9
TAR633G0637 Trochodendron aralioides HOM05D007241 ORTHO05D009142 1.6e-106 390.2 352 63.9
FAN02G0490 Fragaria x ananassa HOM05D007241 ORTHO05D009142 4.8e-106 388.7 340 61.2
FvH4_6g12350 Fragaria vesca HOM05D007241 ORTHO05D009142 3.1e-105 386.0 340 60.9
FAN14G0673 Fragaria x ananassa HOM05D007241 ORTHO05D009142 3.1e-105 386.0 340 60.9
CiPaw.10G153200 Carya illinoinensis HOM05D007241 ORTHO05D009142 4.5e-104 382.1 348 63.2
Gohir.A04G087000 Gossypium hirsutum HOM05D007241 ORTHO05D009142 7.7e-104 381.3 352 61.1
Nn2g11326 Nelumbo nucifera HOM05D007241 ORTHO05D009142 1.3e-103 380.6 344 63.1
Haze_20925 Corylus avellana HOM05D007241 ORTHO05D009142 1.7e-103 380.2 348 63.5
Hma1.2p1_0671F.1_g200780 Hydrangea macrophylla HOM05D007241 ORTHO05D009142 7.2e-102 374.8 339 62.2
Dinv35525 Davidia involucrata HOM05D007241 ORTHO05D009142 1.2e-101 374.0 329 63.5
Aa31LG3G1690 Aethionema arabicum HOM05D007241 ORTHO05D009142 4.6e-101 372.1 349 61.0
Solyc09g011830.4 Solanum lycopersicum HOM05D007241 ORTHO05D009142 6.1e-101 371.7 348 59.2
Eucgr.K03006 Eucalyptus grandis HOM05D007241 ORTHO05D009142 1.0e-100 370.9 352 59.9
Sopen09g006650 Solanum pennellii HOM05D007241 ORTHO05D009142 6.7e-100 368.2 348 58.3
CANSAT35G2041 Cannabis sativa HOM05D007241 ORTHO05D009142 1.3e-98 364.0 339 61.1
MSTRG.5609 Avicennia marina HOM05D007241 ORTHO05D009142 6.3e-98 361.7 340 60.0
Sp3g07590 Schrenkiella parvula HOM05D007241 ORTHO05D009142 1.4e-97 360.5 301 62.5
THA.LOC104823276 Tarenaya hassleriana HOM05D007241 ORTHO05D009142 1.8e-97 360.1 365 57.5
MBI14_g28606_MAGBIO Magnolia biondii HOM05D007241 ORTHO05D009142 3.1e-97 359.4 347 59.7
Lj3g0002129 Lotus japonicus HOM05D007241 ORTHO05D009142 9.1e-97 357.8 347 57.9
AL3G20320 Arabidopsis lyrata HOM05D007241 ORTHO05D009142 1.2e-96 357.5 349 57.3
BcaC09g48056 Brassica carinata HOM05D007241 ORTHO05D009142 3.4e-96 355.9 350 57.7
CARHR083550 Cardamine hirsuta HOM05D007241 ORTHO05D009142 4.5e-96 355.5 349 55.9
Oeu015010.1 Olea europaea HOM05D007241 ORTHO05D009142 4.5e-96 355.5 314 59.9
PGSC0003DMG400020362 Solanum tuberosum HOM05D007241 ORTHO05D009142 4.5e-96 355.5 345 57.4
Nitab4.5_0007671g0010 Nicotiana tabacum HOM05D007241 ORTHO05D009142 1.0e-95 354.4 347 57.1
Carub.0003s0832 Capsella rubella HOM05D007241 ORTHO05D009142 1.3e-95 354.0 344 56.7
Thhalv10021091m.g Eutrema salsugineum HOM05D007241 ORTHO05D009142 1.3e-95 354.0 349 57.3
AT3G09210 Arabidopsis thaliana HOM05D007241 ORTHO05D009142 3.8e-95 352.4 348 56.6
BolC1t05471H Brassica oleracea HOM05D007241 ORTHO05D009142 3.8e-95 352.4 350 56.9
Peaxi162Scf00427g00616 Petunia axillaris HOM05D007241 ORTHO05D009142 6.5e-95 351.7 346 57.2
Ah.07g207300 Amaranthus hybridus HOM05D007241 ORTHO05D009142 8.5e-95 351.3 346 58.1
BraA01t04312Z Brassica rapa HOM05D007241 ORTHO05D009142 1.1e-94 350.9 350 57.1
AUR62015997 Chenopodium quinoa HOM05D007241 ORTHO05D009142 1.4e-94 350.5 344 57.8
CAN.G1233.2 Capsicum annuum HOM05D007241 ORTHO05D009142 1.9e-94 350.1 342 57.0
BcaC09g48011 Brassica carinata HOM05D007241 ORTHO05D009142 3.2e-94 349.4 345 56.8
Lalb_Chr13g0291331 Lupinus albus HOM05D007241 ORTHO05D009142 5.5e-94 348.6 345 55.9
Sed0022131 Sechium edule HOM05D007241 ORTHO05D009142 9.4e-94 347.8 341 56.6
MELO3C003216.2 Cucumis melo HOM05D007241 ORTHO05D009142 1.6e-93 347.1 344 56.1
Cc06_g01830 Coffea canephora HOM05D007241 ORTHO05D009142 2.1e-93 346.7 347 56.2
Nitab4.5_0000008g0420 Nicotiana tabacum HOM05D007241 ORTHO05D009142 4.7e-93 345.5 352 56.2
Migut.J00242 Erythranthe guttata HOM05D007241 ORTHO05D009142 6.1e-93 345.1 345 56.5
Aqoxy1G00764 Aquilegia oxysepala HOM05D007241 ORTHO05D009142 3.0e-92 342.8 346 57.5
MD04G1143600 Malus domestica HOM05D007241 ORTHO05D009142 3.0e-92 342.8 318 59.1
ClCG04G007350 Citrullus lanatus HOM05D007241 ORTHO05D009142 1.1e-91 340.9 353 54.1
CsaV3_4G025900 Cucumis sativus L. HOM05D007241 ORTHO05D009142 3.3e-91 339.3 344 53.8
vmacro20223 Vaccinium macrocarpon HOM05D007241 ORTHO05D009142 1.8e-89 333.6 358 54.7
Glyma.01G109100 Glycine max HOM05D007241 ORTHO05D009142 4.1e-89 332.4 348 52.3
EL10Ac3g05675 Beta vulgaris HOM05D007241 ORTHO05D009142 7.7e-88 328.2 347 53.6
Sc22g0004510 Simmondsia chinensis HOM05D007241 ORTHO05D009142 2.2e-87 326.6 305 59.0
Hund04733 Selenicereus undatus HOM05D007241 ORTHO05D009142 8.5e-87 324.7 342 55.6
Psat7g241800 Pisum sativum HOM05D007241 ORTHO05D009142 1.1e-86 324.3 341 53.4
Actinidia13799 Actinidia chinensis HOM05D007241 ORTHO05D009142 1.2e-85 320.9 324 55.2
Ca_20114_v3 Cicer arietinum L. HOM05D007241 ORTHO05D009142 4.7e-85 318.9 402 48.0
SGA_v2.0_scaffold85G26792 Striga asiatica HOM05D007241 ORTHO05D009142 6.1e-85 318.5 342 52.6
arahy.Tifrunner.gnm1.ann1.IV4I8P Arachis hypogaea HOM05D007241 ORTHO05D009142 6.7e-84 315.1 293 56.0
VMungo0331G1333 Vigna mungo HOM05D007241 ORTHO05D009142 1.1e-83 314.3 345 50.1
SalBow3G1957 Salvia bowleyana HOM05D007241 ORTHO05D009142 2.0e-83 313.5 323 55.1
PSO063G4791 Papaver somniferum HOM05D007241 ORTHO05D009142 3.3e-83 312.8 297 55.6
unitig_749.g14176 Utricularia gibba HOM05D007241 ORTHO05D009142 5.7e-83 312.0 338 52.4
Lsat_1_v5_gn_2_72881 Lactuca sativa HOM05D007241 ORTHO05D009142 4.8e-82 308.9 308 54.2
Phvul.010G006200 Phaseolus vulgaris HOM05D007241 ORTHO05D009142 1.4e-81 307.4 345 48.4
Medtr4g019060 Medicago truncatula HOM05D007241 ORTHO05D009142 2.0e-80 303.5 341 52.8
DCAR_010398 Daucus carota HOM05D007241 ORTHO05D009142 8.5e-79 298.1 392 48.0
HanXRQChr10g0300011 Helianthus annuus HOM05D007241 ORTHO05D009142 6.1e-77 292.0 325 51.4
ATR0618G224 Amborella trichopoda HOM05D007241 ORTHO05D009142 5.2e-76 288.9 349 49.3
arahy.Tifrunner.gnm1.ann1.D4R6TJ Arachis hypogaea HOM05D007241 ORTHO05D009142 2.2e-74 283.5 341 47.8
ECA233G2042 Erigeron canadensis HOM05D007241 ORTHO05D009142 5.9e-72 275.4 286 52.1
Rhsim05G0202600 Rhododendron simsii HOM05D007241 ORTHO05D009142 7.7e-72 275.0 353 52.4
HPP92_014289 Vanilla planifolia HOM05D007241 ORTHO05D009142 8.0e-61 238.4 250 50.4
Os03g0825500 Oryza sativa ssp. japonica HOM05D007241 ORTHO05D009142 8.9e-60 235.0 290 44.5
AUR62021204 Chenopodium quinoa HOM05D007241 ORTHO05D009142 5.4e-57 225.7 342 46.2
Zm00001eb063100 Zea mays HOM05D007241 ORTHO05D009142 1.1e-54 218.0 295 42.7
arahy.Tifrunner.gnm1.ann1.4L01Q9 Arachis hypogaea HOM05D007241 ORTHO05D009142 2.6e-51 206.8 202 52.5
CDE04G1578 Ceratophyllum demersum HOM05D007241 ORTHO05D009142 4.4e-51 206.1 217 49.8
TPR.G8187 Trifolium pratense HOM05D007241 ORTHO05D009142 2.4e-49 200.3 278 44.2
COL.COLO4_14646 Corchorus olitorius HOM05D007241 ORTHO05D009142 3.2e-41 173.3 143 67.8
MD12G1157800 Malus domestica HOM05D007241 ORTHO05D009142 1.4e-33 147.9 247 42.1
TPR.G40038 Trifolium pratense HOM05D007241 ORTHO05D009142 4.3e-30 136.3 96 62.5
Lj3A958T74 Lonicera japonica HOM05D007241 ORTHO05D009142 2.8e-29 133.7 139 56.8
Mapoly0003s0142 Marchantia polymorpha HOM05D007241 ORTHO05D009142 1.2e-27 128.3 286 29.7
COL.COLO4_14645 Corchorus olitorius HOM05D007241 ORTHO05D009142 4.9e-26 122.9 133 59.4
Lj3A958T75 Lonicera japonica HOM05D007241 ORTHO05D009142 8.1e-21 105.5 131 51.1
CBR_g25746 Chara braunii HOM05D000019 ORTHO05D000048 1.3e-18 98.2 305 24.3
Pp3c24_19950 Physcomitrium patens HOM05D007241 ORTHO05D009142 2.2e-18 97.4 287 26.5
BcaB05g24622 Brassica carinata HOM05D007241 ORTHO05D009142 9.3e-17 92.0 129 45.7
SEGI_13087 Sequoiadendron giganteum HOM05D007241 ORTHO05D009142 1.6e-13 81.3 75 52.0
TAR629G1375 Trochodendron aralioides HOM05D007241 ORTHO05D009142 5.8e-11 72.8 63 63.5
FAN28G2275 Fragaria x ananassa HOM05D000356 ORTHO05D000265 1.3e-10 71.6 101 44.6


User provided reference genes

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