Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.004G221700 Populus trichocarpa HOM05D005383 ORTHO05D006722 2.2e-152 542.7 379 100.0
Potri.003G010400 Populus trichocarpa HOM05D005383 ORTHO05D006722 1.5e-132 476.9 379 90.8
Sabra03G0005300 Salix brachista HOM05D005383 ORTHO05D006722 4.6e-110 402.1 496 50.0
Manes.10G120600 Manihot esculenta HOM05D005383 ORTHO05D006722 5.1e-109 398.7 360 83.6
Cpa.g.sc161.1 Carica papaya HOM05D005383 ORTHO05D006722 2.5e-108 396.4 372 79.3
Ciclev10001534m.g Citrus clementina HOM05D005383 ORTHO05D006722 4.8e-107 392.1 381 78.0
Prupe.1G576100 Prunus persica HOM05D005383 ORTHO05D006722 2.0e-105 386.7 373 71.3
Atru.chr6.733 Acer truncatum HOM05D005383 ORTHO05D006722 2.6e-105 386.3 380 78.9
QL02p099934 Quercus lobata HOM05D005383 ORTHO05D006722 3.4e-105 386.0 370 79.2
Ciclev10003783m.g Citrus clementina HOM05D005383 ORTHO05D006722 1.3e-104 384.0 381 77.7
Thecc.02G025800 Theobroma cacao HOM05D005383 ORTHO05D006722 7.2e-103 378.3 371 78.4
Gohir.A01G182000 Gossypium hirsutum HOM05D005383 ORTHO05D006722 9.3e-103 377.9 373 77.7
Gohir.D01G173100 Gossypium hirsutum HOM05D005383 ORTHO05D006722 2.7e-102 376.3 373 77.5
MD08G1239600 Malus domestica HOM05D005383 ORTHO05D006722 4.6e-102 375.6 375 76.5
CiPaw.05G051100 Carya illinoinensis HOM05D005383 ORTHO05D006722 6.1e-102 375.2 371 77.1
Gorai.002G214700 Gossypium raimondii HOM05D005383 ORTHO05D006722 1.0e-101 374.4 373 77.2
Duzib248G0552 Durio zibethinus HOM05D005383 ORTHO05D006722 1.8e-101 373.6 373 62.2
CANSAT54G1323 Cannabis sativa HOM05D005383 ORTHO05D006722 3.0e-101 372.9 383 74.4
Ca_00052_v3 Cicer arietinum L. HOM05D005383 ORTHO05D006722 3.9e-101 372.5 380 73.7
GSVIVG01023286001 Vitis vinifera HOM05D005383 ORTHO05D006722 3.9e-101 372.5 380 75.8
COL.COLO4_17761 Corchorus olitorius HOM05D005383 ORTHO05D006722 8.8e-101 371.3 374 61.8
Haze_01820 Corylus avellana HOM05D005383 ORTHO05D006722 2.2e-99 366.7 387 63.0
CiPaw.06G143700 Carya illinoinensis HOM05D005383 ORTHO05D006722 1.2e-97 360.9 371 65.0
RcHm_v2.0_Chr7g0220861 Rosa chinensis HOM05D005383 ORTHO05D006722 1.2e-97 360.9 375 76.0
TWI23G0375 Tripterygium wilfordii HOM05D005383 ORTHO05D006722 2.6e-97 359.8 368 78.5
FvH4_5g28700 Fragaria vesca HOM05D005383 ORTHO05D006722 2.2e-96 356.7 373 74.5
CSS0013900 Camellia sinensis var. sinensis HOM05D005383 ORTHO05D006722 2.9e-96 356.3 376 75.5
CSS0016011 Camellia sinensis var. sinensis HOM05D005383 ORTHO05D006722 2.9e-96 356.3 376 75.5
MELO3C011837.2 Cucumis melo HOM05D005383 ORTHO05D006722 2.9e-96 356.3 379 77.0
CsaV3_5G029920 Cucumis sativus L. HOM05D005383 ORTHO05D006722 3.8e-96 355.9 379 76.5
FAN08G2879 Fragaria x ananassa HOM05D005383 ORTHO05D006722 3.8e-96 355.9 373 74.3
Psat1g221920 Pisum sativum HOM05D005383 ORTHO05D006722 6.5e-96 355.1 383 74.7
arahy.Tifrunner.gnm1.ann1.UJ0XJV Arachis hypogaea HOM05D005383 ORTHO05D006722 5.5e-95 352.1 359 74.7
TPR.G2110 Trifolium pratense HOM05D005383 ORTHO05D006722 6.1e-94 348.6 385 73.8
Sed0026787 Sechium edule HOM05D005383 ORTHO05D006722 1.4e-93 347.4 380 72.1
FAN13G0305 Fragaria x ananassa HOM05D005383 ORTHO05D006722 2.3e-93 346.7 396 69.9
Eucgr.G00356 Eucalyptus grandis HOM05D005383 ORTHO05D006722 6.7e-93 345.1 382 73.0
Lj4g0022432 Lotus japonicus HOM05D005383 ORTHO05D006722 1.1e-92 344.4 383 73.6
Rhsim11G0125900 Rhododendron simsii HOM05D005383 ORTHO05D006722 1.1e-92 344.4 364 75.5
Glyma.05G167900 Glycine max HOM05D005383 ORTHO05D006722 4.8e-91 339.0 382 71.7
Glyma.08G126300 Glycine max HOM05D005383 ORTHO05D006722 8.2e-91 338.2 383 71.3
Cc02_g22940 Coffea canephora HOM05D005383 ORTHO05D006722 1.8e-90 337.0 379 72.3
Lalb_Chr07g0185851 Lupinus albus HOM05D005383 ORTHO05D006722 1.8e-90 337.0 376 72.9
Hund12945 Selenicereus undatus HOM05D005383 ORTHO05D006722 4.1e-90 335.9 373 65.4
VMungo0251G3735 Vigna mungo HOM05D005383 ORTHO05D006722 5.3e-90 335.5 383 71.3
Nitab4.5_0000548g0200 Nicotiana tabacum HOM05D005383 ORTHO05D006722 1.2e-89 334.3 379 72.6
Hma1.2p1_1108F.1_g257860 Hydrangea macrophylla HOM05D005383 ORTHO05D006722 1.5e-89 334.0 374 75.1
Nn5g27588 Nelumbo nucifera HOM05D005383 ORTHO05D006722 1.5e-89 334.0 371 72.5
TWI59G0781 Tripterygium wilfordii HOM05D005383 ORTHO05D006722 3.4e-89 332.8 357 77.3
Nitab4.5_0009812g0010 Nicotiana tabacum HOM05D005383 ORTHO05D006722 4.5e-89 332.4 369 72.1
CAN.G968.1 Capsicum annuum HOM05D005383 ORTHO05D006722 2.9e-88 329.7 374 73.5
Peaxi162Scf00003g04037 Petunia axillaris HOM05D005383 ORTHO05D006722 2.9e-88 329.7 339 74.0
Phvul.002G248200 Phaseolus vulgaris HOM05D005383 ORTHO05D006722 3.8e-88 329.3 383 70.5
EL10Ac2g02705 Beta vulgaris HOM05D005383 ORTHO05D006722 8.5e-88 328.2 368 73.6
TAR628G0519 Trochodendron aralioides HOM05D005383 ORTHO05D006722 4.2e-87 325.9 360 71.7
vmacro01730 Vaccinium macrocarpon HOM05D005383 ORTHO05D006722 4.2e-87 325.9 362 75.7
Dinv01847 Davidia involucrata HOM05D005383 ORTHO05D006722 5.5e-87 325.5 348 75.6
DCAR_025351 Daucus carota HOM05D005383 ORTHO05D006722 1.8e-85 320.5 348 71.3
Sed0022153 Sechium edule HOM05D005383 ORTHO05D006722 2.3e-85 320.1 368 71.7
Solyc03g083310.4 Solanum lycopersicum HOM05D005383 ORTHO05D006722 2.3e-85 320.1 390 67.7
PGSC0003DMG400009082 Solanum tuberosum HOM05D005383 ORTHO05D006722 6.7e-85 318.5 385 67.8
Sabra01G0167800 Salix brachista HOM05D005383 ORTHO05D006722 2.0e-84 317.0 182 95.1
Lalb_Chr13g0295611 Lupinus albus HOM05D005383 ORTHO05D006722 3.3e-84 316.2 388 71.4
THA.LOC104801420 Tarenaya hassleriana HOM05D005383 ORTHO05D006722 3.3e-84 316.2 387 71.1
TAR381G0956 Trochodendron aralioides HOM05D005383 ORTHO05D006722 2.8e-83 313.2 381 68.8
arahy.Tifrunner.gnm1.ann1.E4SRBI Arachis hypogaea HOM05D005383 ORTHO05D006722 2.4e-82 310.1 335 77.0
arahy.Tifrunner.gnm1.ann1.I6AGPX Arachis hypogaea HOM05D005383 ORTHO05D006722 4.1e-82 309.3 335 77.0
BcaC04g20728 Brassica carinata HOM05D005383 ORTHO05D006722 5.9e-81 305.4 379 70.2
BolC9t56882H Brassica oleracea HOM05D005383 ORTHO05D006722 5.9e-81 305.4 379 70.2
Ciclev10003892m.g Citrus clementina HOM05D005383 ORTHO05D006722 7.7e-81 305.1 335 66.9
A10p07980 Brassica napus HOM05D005383 ORTHO05D006722 2.9e-80 303.1 377 70.3
BraSC35t46002Z Brassica rapa HOM05D005383 ORTHO05D006722 3.8e-80 302.8 379 69.9
Sopen03g023060 Solanum pennellii HOM05D005383 ORTHO05D006722 3.8e-80 302.8 389 66.3
PGR042G1418 Punica granatum HOM05D005383 ORTHO05D006722 5.0e-80 302.4 392 67.3
Thhalv10028723m.g Eutrema salsugineum HOM05D005383 ORTHO05D006722 1.9e-79 300.4 373 68.6
MSTRG.5117 Avicennia marina HOM05D005383 ORTHO05D006722 5.5e-79 298.9 380 67.9
Lj9A301T38 Lonicera japonica HOM05D005383 ORTHO05D006722 5.5e-79 298.9 341 74.5
Sp6g13330 Schrenkiella parvula HOM05D005383 ORTHO05D006722 6.1e-78 295.4 388 69.1
AL6G41240 Arabidopsis lyrata HOM05D005383 ORTHO05D006722 9.7e-76 288.1 375 67.7
Migut.B00804 Erythranthe guttata HOM05D005383 ORTHO05D006722 4.8e-75 285.8 362 68.5
AT4G06634 Arabidopsis thaliana HOM05D005383 ORTHO05D006722 8.2e-75 285.0 375 68.3
C09p39820 Brassica napus HOM05D005383 ORTHO05D006722 1.1e-74 284.6 363 68.9
Carub.0006s2631 Capsella rubella HOM05D005383 ORTHO05D006722 1.4e-74 284.3 383 67.6
Lsat_1_v5_gn_4_6600 Lactuca sativa HOM05D005383 ORTHO05D006722 5.3e-74 282.3 367 68.1
PSO063G2254 Papaver somniferum HOM05D005383 ORTHO05D006722 1.6e-73 280.8 359 68.0
CARHR260070 Cardamine hirsuta HOM05D005383 ORTHO05D006722 6.5e-72 275.4 382 68.6
Aa31LG3G14030 Aethionema arabicum HOM05D005383 ORTHO05D006722 1.9e-71 273.9 387 63.8
PSO017G2626 Papaver somniferum HOM05D005383 ORTHO05D006722 2.5e-71 273.5 359 67.4
BcaB08g35467 Brassica carinata HOM05D005383 ORTHO05D006722 4.4e-68 262.7 378 65.9
HanXRQChr08g0209021 Helianthus annuus HOM05D005383 ORTHO05D006722 1.3e-67 261.2 346 67.3
Aqoxy6G00141 Aquilegia oxysepala HOM05D005383 ORTHO05D006722 2.8e-67 260.0 335 70.1
ECA233G1887 Erigeron canadensis HOM05D005383 ORTHO05D006722 2.8e-67 260.0 367 65.9
CDE08G1140 Ceratophyllum demersum HOM05D005383 ORTHO05D006722 1.1e-66 258.1 375 63.7
Actinidia00189 Actinidia chinensis HOM05D005383 ORTHO05D006722 1.4e-66 257.7 269 79.2
CDE02G2650 Ceratophyllum demersum HOM05D005383 ORTHO05D006722 5.4e-66 255.8 375 63.7
SGA_v2.0_scaffold42G15921 Striga asiatica HOM05D005383 ORTHO05D006722 5.4e-66 255.8 386 63.5
HanXRQChr04g0103661 Helianthus annuus HOM05D005383 ORTHO05D006722 1.7e-64 250.8 372 63.4
C03p19190 Brassica napus HOM05D005383 ORTHO05D006722 8.6e-64 248.4 369 61.5
A03p16300 Brassica napus HOM05D005383 ORTHO05D006722 2.5e-63 246.9 375 60.5
BolC3t14307H Brassica oleracea HOM05D005383 ORTHO05D006722 1.6e-62 244.2 383 50.4
unitig_699.g19853 Utricularia gibba HOM05D005383 ORTHO05D006722 2.6e-60 236.9 365 42.2
MSTRG.16504 Avicennia marina HOM05D005383 ORTHO05D006722 7.5e-60 235.3 303 71.0
BraA03t10921Z Brassica rapa HOM05D005383 ORTHO05D006722 3.7e-59 233.0 383 49.3
BcaC01g06075 Brassica carinata HOM05D005383 ORTHO05D006722 3.1e-58 229.9 383 60.6
Sc07g0004970 Simmondsia chinensis HOM05D005383 ORTHO05D006722 7.0e-58 228.8 318 72.3
Lsat_1_v5_gn_8_160061 Lactuca sativa HOM05D005383 ORTHO05D006722 2.3e-56 223.8 269 73.2
BcaC01g06099 Brassica carinata HOM05D005383 ORTHO05D006722 1.1e-55 221.5 367 59.4
Oeu036675.1 Olea europaea HOM05D005383 ORTHO05D006722 2.8e-54 216.9 309 66.3
ATR0071G030 Amborella trichopoda HOM05D005383 ORTHO05D006722 7.0e-50 202.2 327 64.8
HPP92_013744 Vanilla planifolia HOM05D006763 ORTHO05D008659 6.6e-48 195.7 309 63.1
MD15G1431100 Malus domestica HOM05D005383 ORTHO05D006722 1.1e-47 194.9 303 65.7
Peaxi162Scf03254g00012 Petunia axillaris HOM05D005383 ORTHO05D006722 2.5e-47 193.7 169 59.8
HPP92_009272 Vanilla planifolia HOM05D005383 ORTHO05D006722 4.3e-47 193.0 362 55.8
AUR62041111 Chenopodium quinoa HOM05D005383 ORTHO05D006722 6.8e-45 185.7 178 59.0
CAN.G982.21 Capsicum annuum HOM05D005383 ORTHO05D006722 1.9e-42 177.6 181 56.9
unitig_747.g21262 Utricularia gibba HOM05D005383 ORTHO05D006722 7.0e-42 175.6 358 55.6
Os02g0551900 Oryza sativa ssp. japonica HOM05D005383 ORTHO05D006722 9.2e-42 175.3 364 55.5
Actinidia39015 Actinidia chinensis HOM05D005383 ORTHO05D006722 2.1e-41 174.1 129 79.8
FAN04G2588 Fragaria x ananassa HOM05D005383 ORTHO05D006722 3.5e-41 173.3 129 79.8
ClCG11G013400 Citrullus lanatus HOM05D005383 ORTHO05D006722 7.8e-41 172.2 137 78.1
Zm00001eb267130 Zea mays HOM05D005383 ORTHO05D006722 1.9e-39 167.5 378 52.4
Zm00001eb181970 Zea mays HOM05D005383 ORTHO05D006722 7.3e-39 165.6 312 58.0
Zm00001eb243510 Zea mays HOM05D005383 ORTHO05D006722 1.1e-37 161.8 297 60.6
Os05g0106000 Oryza sativa ssp. japonica HOM05D005383 ORTHO05D006722 1.5e-36 157.9 384 49.2
Mapoly0095s0037 Marchantia polymorpha HOM05D005383 ORTHO05D006722 8.1e-30 135.6 318 55.7
FAN18G2475 Fragaria x ananassa HOM05D005383 ORTHO05D006722 1.2e-28 131.7 129 65.9
CBR_g52462 Chara braunii HOM05D005383 ORTHO05D006722 1.7e-24 117.9 264 58.3
AagrBONN_evm.TU.Sc2ySwM_228.1706 Anthoceros agrestis HOM05D005383 ORTHO05D006722 5.1e-24 116.3 239 64.0
Peaxi162Scf00003g03953 Petunia axillaris HOM05D000011 ORTHO05D011267 3.3e-23 113.6 168 43.5
SEGI_13518 Sequoiadendron giganteum HOM05D005383 ORTHO05D006722 4.3e-23 113.2 115 61.7
Pp3c7_7980 Physcomitrium patens HOM05D005383 ORTHO05D006722 5.8e-20 102.8 362 48.3
ATR0071G005 Amborella trichopoda HOM05D005383 ORTHO05D006722 8.4e-19 99.0 93 59.1
SMO347G0081 Selaginella moellendorffii HOM05D005383 ORTHO05D006722 1.7e-16 91.3 228 53.5
arahy.Tifrunner.gnm1.ann1.L3LYUI Arachis hypogaea HOM05D005383 ORTHO05D031493 4.0e-13 80.1 64 68.8
arahy.Tifrunner.gnm1.ann1.0L29ML Arachis hypogaea HOM05D005383 ORTHO05D006722 1.2e-12 78.6 56 76.8
arahy.Tifrunner.gnm1.ann1.VA1YNF Arachis hypogaea HOM05D005383 ORTHO05D006722 2.6e-12 77.4 84 70.2
arahy.Tifrunner.gnm1.ann1.XX0GIY Arachis hypogaea HOM05D005383 ORTHO05D006722 5.8e-12 76.3 56 75.0


User provided reference genes

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