Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.002G010900 Populus trichocarpa HOM05D006705 ORTHO05D008179 4.2e-165 585.9 316 100.0
Sabra02G0008200 Salix brachista HOM05D006705 ORTHO05D008179 7.5e-138 495.4 320 85.3
Sabra05G0193800 Salix brachista HOM05D006705 ORTHO05D008179 6.8e-123 445.7 322 75.8
Potri.005G250200 Populus trichocarpa HOM05D006705 ORTHO05D008179 5.4e-120 436.0 320 75.0
Manes.05G134500 Manihot esculenta HOM05D006705 ORTHO05D008179 3.2e-104 383.6 322 67.4
Haze_22772 Corylus avellana HOM05D006705 ORTHO05D008179 3.8e-97 360.1 320 61.9
Cfa014075 Carpinus fangiana HOM05D006705 ORTHO05D008179 8.4e-97 359.0 318 61.9
QL02p014030 Quercus lobata HOM05D006705 ORTHO05D008179 2.7e-95 354.0 318 65.7
GSVIVG01013362001 Vitis vinifera HOM05D006705 ORTHO05D008179 1.1e-93 348.6 318 60.4
Cpa.g.sc26.199 Carica papaya HOM05D006705 ORTHO05D008179 1.3e-92 345.1 318 60.4
Dinv05535 Davidia involucrata HOM05D006705 ORTHO05D008179 4.8e-92 343.2 317 61.2
Gorai.002G117100 Gossypium raimondii HOM05D006705 ORTHO05D008179 3.1e-91 340.5 324 63.6
Actinidia15490 Actinidia chinensis HOM05D006705 ORTHO05D008179 4.0e-91 340.1 316 57.3
Ciclev10000451m.g Citrus clementina HOM05D006705 ORTHO05D008179 5.3e-91 339.7 316 62.0
Gohir.D01G092000 Gossypium hirsutum HOM05D006705 ORTHO05D008179 6.9e-91 339.3 324 63.0
COL.COLO4_06661 Corchorus olitorius HOM05D006705 ORTHO05D008179 1.0e-89 335.5 320 61.6
CiPaw.08G072900 Carya illinoinensis HOM05D006705 ORTHO05D008179 1.7e-89 334.7 320 59.4
CsaV3_6G031600 Cucumis sativus L. HOM05D006705 ORTHO05D008179 1.9e-88 331.3 334 56.9
Thecc.08G058800 Theobroma cacao HOM05D006705 ORTHO05D008179 1.9e-88 331.3 324 59.3
Gohir.A01G105700 Gossypium hirsutum HOM05D006705 ORTHO05D008179 2.5e-88 330.9 325 62.5
FAN15G2229 Fragaria x ananassa HOM05D006705 ORTHO05D008179 1.6e-87 328.2 323 57.9
FAN27G0286 Fragaria x ananassa HOM05D006705 ORTHO05D008179 1.6e-87 328.2 323 57.6
arahy.Tifrunner.gnm1.ann1.1DQJ64 Arachis hypogaea HOM05D006705 ORTHO05D008179 2.7e-87 327.4 314 59.2
Ca_15434_v3 Cicer arietinum L. HOM05D006705 ORTHO05D008179 4.6e-87 326.6 238 71.8
Ca_15459_v3 Cicer arietinum L. HOM05D006705 ORTHO05D008179 4.6e-87 326.6 238 71.8
ClCG08G009460 Citrullus lanatus HOM05D006705 ORTHO05D008179 4.6e-87 326.6 330 56.7
MELO3C026541.2 Cucumis melo HOM05D006705 ORTHO05D008179 6.0e-87 326.2 336 57.1
arahy.Tifrunner.gnm1.ann1.A2XG10 Arachis hypogaea HOM05D006705 ORTHO05D008179 7.9e-87 325.9 234 71.4
Atru.chr13.134 Acer truncatum HOM05D006705 ORTHO05D008179 1.0e-86 325.5 319 55.2
FvH4_2g37460 Fragaria vesca HOM05D006705 ORTHO05D008179 1.0e-86 325.5 320 57.5
Aa31LG9G12430 Aethionema arabicum HOM05D006705 ORTHO05D008179 8.7e-86 322.4 324 56.8
THA.LOC104825423 Tarenaya hassleriana HOM05D006705 ORTHO05D008179 1.5e-85 321.6 321 55.8
Thhalv10027665m.g Eutrema salsugineum HOM05D006705 ORTHO05D008179 1.9e-85 321.2 319 57.1
vmacro21812 Vaccinium macrocarpon HOM05D006705 ORTHO05D008179 4.3e-85 320.1 315 57.1
Nn5g30939 Nelumbo nucifera HOM05D006705 ORTHO05D008179 7.4e-85 319.3 313 58.1
RcHm_v2.0_Chr6g0304261 Rosa chinensis HOM05D006705 ORTHO05D008179 1.6e-84 318.2 319 57.1
CANSAT25G1831 Cannabis sativa HOM05D006705 ORTHO05D008179 2.2e-84 317.8 320 56.9
Sp7g08260 Schrenkiella parvula HOM05D006705 ORTHO05D008179 4.8e-84 316.6 316 56.0
Sed0011006 Sechium edule HOM05D006705 ORTHO05D008179 4.8e-84 316.6 318 56.0
BcaC02g10761 Brassica carinata HOM05D006705 ORTHO05D008179 6.3e-84 316.2 319 55.5
C04p25410 Brassica napus HOM05D006705 ORTHO05D008179 6.3e-84 316.2 319 55.5
BolC4t24049H Brassica oleracea HOM05D006705 ORTHO05D008179 6.3e-84 316.2 319 55.5
Medtr3g115270 Medicago truncatula HOM05D006705 ORTHO05D008179 8.2e-84 315.8 298 60.1
Glyma.06G018300 Glycine max HOM05D006705 ORTHO05D008179 1.8e-83 314.7 238 68.9
CARHR284920 Cardamine hirsuta HOM05D006705 ORTHO05D008179 3.1e-83 313.9 233 70.0
BcaC06g31759 Brassica carinata HOM05D006705 ORTHO05D008179 5.3e-83 313.2 233 67.8
A03p65890 Brassica napus HOM05D006705 ORTHO05D008179 5.3e-83 313.2 320 55.9
BraA03t15643Z Brassica rapa HOM05D006705 ORTHO05D008179 5.3e-83 313.2 320 55.9
Lalb_Chr11g0061641 Lupinus albus HOM05D006705 ORTHO05D008179 5.3e-83 313.2 238 68.9
Psat5g159080 Pisum sativum HOM05D006705 ORTHO05D008179 5.3e-83 313.2 330 56.4
AL8G19290 Arabidopsis lyrata HOM05D006705 ORTHO05D008179 9.0e-83 312.4 233 68.2
CSS0004504 Camellia sinensis var. sinensis HOM05D006705 ORTHO05D008179 1.2e-82 312.0 316 56.0
CSS0019684 Camellia sinensis var. sinensis HOM05D006705 ORTHO05D008179 1.2e-82 312.0 316 56.0
Lj1g0004605 Lotus japonicus HOM05D006705 ORTHO05D008179 2.0e-82 311.2 294 61.9
Rhsim06G0007500 Rhododendron simsii HOM05D006705 ORTHO05D008179 2.0e-82 311.2 319 55.8
Aqoxy5G01043 Aquilegia oxysepala HOM05D006705 ORTHO05D008179 2.6e-82 310.8 321 53.6
AT5G42310 Arabidopsis thaliana HOM05D006705 ORTHO05D008179 2.6e-82 310.8 319 55.8
Carub.0008s0687 Capsella rubella HOM05D006705 ORTHO05D008179 2.6e-82 310.8 232 67.7
CAN.G985.2 Capsicum annuum HOM05D006705 ORTHO05D008179 2.6e-82 310.8 229 67.7
PGR031G2749 Punica granatum HOM05D006705 ORTHO05D008179 3.4e-82 310.5 318 57.9
AUR62043173 Chenopodium quinoa HOM05D006705 ORTHO05D008179 1.0e-81 308.9 326 55.5
Nitab4.5_0000337g0230 Nicotiana tabacum HOM05D006705 ORTHO05D008179 2.2e-81 307.8 228 68.4
VMungo1309G2580 Vigna mungo HOM05D006705 ORTHO05D008179 2.2e-81 307.8 316 55.4
AUR62036875 Chenopodium quinoa HOM05D006705 ORTHO05D008179 2.9e-81 307.4 241 66.4
Nitab4.5_0025577g0010 Nicotiana tabacum HOM05D006705 ORTHO05D008179 2.9e-81 307.4 228 68.0
Prupe.1G354600 Prunus persica HOM05D006705 ORTHO05D008179 8.5e-81 305.8 232 68.5
TAR376G0550 Trochodendron aralioides HOM05D006705 ORTHO05D008179 1.4e-80 305.1 243 66.7
Hund05113 Selenicereus undatus HOM05D006705 ORTHO05D008179 1.9e-80 304.7 326 54.0
TPR.G38137 Trifolium pratense HOM05D006705 ORTHO05D008179 1.9e-80 304.7 305 58.4
Phvul.009G010700 Phaseolus vulgaris HOM05D006705 ORTHO05D008179 2.5e-80 304.3 316 55.7
Cc10_g00680 Coffea canephora HOM05D006705 ORTHO05D008179 5.5e-80 303.1 312 54.8
Hma1.2p1_0507F.1_g168450 Hydrangea macrophylla HOM05D006705 ORTHO05D008179 5.5e-80 303.1 237 67.5
EL10Ac1g01967 Beta vulgaris HOM05D006705 ORTHO05D008179 7.2e-80 302.8 234 65.8
Peaxi162Scf00400g00113 Petunia axillaris HOM05D006705 ORTHO05D008179 9.4e-80 302.4 231 66.2
Glyma.04G018000 Glycine max HOM05D006705 ORTHO05D008179 1.6e-79 301.6 292 58.2
Oeu007482.1 Olea europaea HOM05D006705 ORTHO05D008179 4.6e-79 300.1 266 58.6
PGSC0003DMG400011663 Solanum tuberosum HOM05D006705 ORTHO05D008179 1.4e-78 298.5 228 66.7
Lsat_1_v5_gn_9_45140 Lactuca sativa HOM05D006705 ORTHO05D008179 3.9e-78 297.0 319 53.3
MD12G1003200 Malus domestica HOM05D006705 ORTHO05D008179 8.8e-78 295.8 335 55.2
DCAR_013913 Daucus carota HOM05D006705 ORTHO05D008179 3.3e-77 293.9 308 55.2
Solyc08g045850.3 Solanum lycopersicum HOM05D006705 ORTHO05D008179 4.3e-77 293.5 228 66.2
Sopen08g014170 Solanum pennellii HOM05D006705 ORTHO05D008179 4.3e-77 293.5 228 66.2
MSTRG.1107 Avicennia marina HOM05D006705 ORTHO05D008179 5.7e-77 293.1 232 62.9
SalBow7G0522 Salvia bowleyana HOM05D006705 ORTHO05D008179 2.8e-76 290.8 232 63.8
PSO170G2138 Papaver somniferum HOM05D006705 ORTHO05D008179 6.3e-76 289.7 236 61.9
Migut.C00960 Erythranthe guttata HOM05D006705 ORTHO05D008179 4.1e-75 287.0 235 61.3
PSO210G3824 Papaver somniferum HOM05D006705 ORTHO05D008179 4.1e-75 287.0 236 61.0
MD15G1002100 Malus domestica HOM05D006705 ORTHO05D008179 5.3e-75 286.6 233 66.1
HanXRQChr05g0146791 Helianthus annuus HOM05D006705 ORTHO05D008179 1.7e-73 281.6 229 62.0
SGA_v2.0_scaffold108G30860 Striga asiatica HOM05D006705 ORTHO05D008179 1.7e-73 281.6 313 50.5
Ah.11g041180 Amaranthus hybridus HOM05D006705 ORTHO05D008179 2.9e-73 280.8 235 63.4
CDE02G1751 Ceratophyllum demersum HOM05D006705 ORTHO05D008179 3.6e-71 273.9 218 64.7
ECA232G0132 Erigeron canadensis HOM05D006705 ORTHO05D008179 1.8e-70 271.6 279 52.0
Lsat_1_v5_gn_8_26180 Lactuca sativa HOM05D006705 ORTHO05D008179 2.3e-70 271.2 293 50.5
Sc15g0004450 Simmondsia chinensis HOM05D006705 ORTHO05D008179 2.6e-69 267.7 316 49.1
CDE04G2934 Ceratophyllum demersum HOM05D006705 ORTHO05D008179 3.7e-68 263.8 299 51.5
HanXRQChr12g0367581 Helianthus annuus HOM05D006705 ORTHO05D008179 2.4e-67 261.2 271 53.1
ECA233G5787 Erigeron canadensis HOM05D006705 ORTHO05D008179 4.1e-67 260.4 305 48.5
Eucgr.F03553 Eucalyptus grandis HOM05D006705 ORTHO05D008179 3.7e-60 237.3 263 57.4
Lj4A11G70 Lonicera japonica HOM05D006705 ORTHO05D008179 1.8e-54 218.4 153 71.2
MBI08_g41522_MAGBIO Magnolia biondii HOM05D006705 ORTHO05D008179 8.8e-46 189.5 252 48.0
FAN20G2687 Fragaria x ananassa HOM05D000148 ORTHO05D008179 4.2e-40 170.6 151 57.0
HPP92_000875 Vanilla planifolia HOM05D006705 ORTHO05D008179 1.2e-39 169.1 232 41.8
SEGI_04333 Sequoiadendron giganteum HOM05D006705 ORTHO05D000002 2.5e-32 144.8 184 42.9
ATR0661G389 Amborella trichopoda HOM05D006705 ORTHO05D008179 1.8e-30 138.7 199 38.7
Zm00001eb323580 Zea mays HOM05D006705 ORTHO05D008179 3.4e-21 107.8 238 33.6
Os07g0548300 Oryza sativa ssp. japonica HOM05D006705 ORTHO05D008179 1.4e-19 102.4 238 33.6
Mapoly0048s0090 Marchantia polymorpha HOM05D006705 ORTHO05D008179 2.4e-19 101.7 202 32.7
SMO180G0012 Selaginella moellendorffii HOM05D006705 ORTHO05D008179 1.6e-18 99.0 172 32.0
AagrBONN_evm.TU.Sc2ySwM_362.1316 Anthoceros agrestis HOM05D006705 ORTHO05D008179 6.0e-18 97.1 170 30.0
Nitab4.5_0002710g0130 Nicotiana tabacum HOM05D006705 ORTHO05D008179 1.5e-13 82.4 49 79.6
Gohir.D06G036701 Gossypium hirsutum HOM05D006705 ORTHO05D008179 3.4e-13 81.3 48 81.2
Gorai.010G041000 Gossypium raimondii HOM05D006705 ORTHO05D008179 3.4e-13 81.3 48 81.2
Eucgr.F03554 Eucalyptus grandis HOM05D006705 ORTHO05D008179 1.3e-12 79.3 47 80.9
CDE02G4098 Ceratophyllum demersum HOM05D006705 ORTHO05D008179 3.7e-12 77.8 47 78.7
Gohir.D05G336850 Gossypium hirsutum HOM05D006705 ORTHO05D008179 9.2e-11 73.2 56 69.6
FvH4_5g30181 Fragaria vesca HOM05D006705 ORTHO05D008179 2.3e-09 68.6 66 54.5
BcaNung05253 Brassica carinata HOM05D006705 ORTHO05D008179 6.6e-09 67.0 47 68.1
Pp3c11_21930 Physcomitrium patens HOM05D006705 ORTHO05D008179 2.1e-07 62.0 200 27.0
Gohir.D06G157800 Gossypium hirsutum HOM05D000485 ORTHO05D000341 6.2e-07 60.5 43 69.8
PGR142G2334 Punica granatum HOM05D007456 ORTHO05D009411 1.1e-06 59.7 45 60.0
Cc11_g03880 Coffea canephora HOM05D007456 ORTHO05D009411 1.8e-06 58.9 45 60.0


User provided reference genes

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