Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G128900 Phaseolus vulgaris HOM05D001957 ORTHO05D002015 3.2e-80 301.6 144 100.0
Phvul.009G008800 Phaseolus vulgaris HOM05D001957 ORTHO05D002015 3.3e-56 221.9 152 75.7
VMungo1309G0331 Vigna mungo HOM05D001957 ORTHO05D002015 2.0e-53 212.6 152 73.7
Glyma.04G014100 Glycine max HOM05D001957 ORTHO05D002015 5.2e-46 188.0 147 67.3
Glyma.06G013900 Glycine max HOM05D001957 ORTHO05D002015 2.9e-44 182.2 140 69.3
arahy.Tifrunner.gnm1.ann1.FGBY5B Arachis hypogaea HOM05D001957 ORTHO05D002015 4.9e-28 128.3 163 50.9
Ca_15380_v3 Cicer arietinum L. HOM05D001957 ORTHO05D002015 1.9e-27 126.3 143 51.7
Lj1g0013891 Lotus japonicus HOM05D001957 ORTHO05D002015 7.8e-26 120.9 110 57.3
arahy.Tifrunner.gnm1.ann1.ICIJ2U Arachis hypogaea HOM05D001957 ORTHO05D002015 2.8e-23 112.5 87 63.2
TPR.G38212 Trifolium pratense HOM05D001957 ORTHO05D002015 1.9e-16 89.7 106 52.8
Lalb_Chr23g0265481 Lupinus albus HOM05D001957 ORTHO05D002015 9.6e-16 87.4 134 45.5
Atru.chr13.41 Acer truncatum HOM05D001957 ORTHO05D002015 1.6e-15 86.7 79 58.2
Ciclev10001099m.g Citrus clementina HOM05D001957 ORTHO05D002015 1.4e-14 83.6 95 50.5
Psat5g008600 Pisum sativum HOM05D001957 ORTHO05D002015 3.1e-14 82.4 101 50.5
Manes.05G129200 Manihot esculenta HOM05D001957 ORTHO05D002015 1.2e-13 80.5 111 39.6
Lsat_1_v5_gn_8_26020 Lactuca sativa HOM05D001957 ORTHO05D002015 3.4e-13 79.0 114 42.1
Cfa014145 Carpinus fangiana HOM05D001957 ORTHO05D002015 2.2e-12 76.3 56 62.5
Thecc.08G098700 Theobroma cacao HOM05D001957 ORTHO05D002015 2.2e-12 76.3 98 43.9
Sabra02G0002500 Salix brachista HOM05D001957 ORTHO05D002015 3.8e-12 75.5 98 43.9
COL.COLO4_03301 Corchorus olitorius HOM05D001957 ORTHO05D002015 6.4e-12 74.7 63 58.7
Haze_22870 Corylus avellana HOM05D001957 ORTHO05D002015 1.9e-11 73.2 118 39.0
MD06G1002900 Malus domestica HOM05D001957 ORTHO05D002015 1.9e-11 73.2 147 39.5
Medtr3g116200 Medicago truncatula HOM05D001957 ORTHO05D002015 1.9e-11 73.2 107 41.1
Potri.002G003700 Populus trichocarpa HOM05D001957 ORTHO05D002015 1.9e-11 73.2 115 36.5
Duzib041G0302 Durio zibethinus HOM05D001957 ORTHO05D002015 2.4e-11 72.8 101 42.6
Gohir.A01G101700 Gossypium hirsutum HOM05D001957 ORTHO05D002015 3.2e-11 72.4 94 40.4
QL02p015933 Quercus lobata HOM05D001957 ORTHO05D002015 3.2e-11 72.4 66 54.5
Gohir.D01G086800 Gossypium hirsutum HOM05D001957 ORTHO05D002015 7.1e-11 71.2 101 40.6
Gorai.002G112400 Gossypium raimondii HOM05D001957 ORTHO05D002015 7.1e-11 71.2 101 40.6
AL2G36650 Arabidopsis lyrata HOM05D001957 ORTHO05D002015 3.5e-10 68.9 125 36.0
Dinv23328 Davidia involucrata HOM05D001957 ORTHO05D002015 3.5e-10 68.9 60 55.0
Duzib093G1802 Durio zibethinus HOM05D001957 ORTHO05D002015 4.6e-10 68.6 63 54.0
Lj4C813T10 Lonicera japonica HOM05D001957 ORTHO05D002015 1.3e-09 67.0 44 63.6
Aa31LG4G6630 Aethionema arabicum HOM05D001957 ORTHO05D002015 1.8e-09 66.6 125 36.0
Cpa.g.sc26.2 Carica papaya HOM05D001957 ORTHO05D002015 1.8e-09 66.6 110 42.7
Prupe.5G004500 Prunus persica HOM05D001957 ORTHO05D002015 1.8e-09 66.6 96 43.8
AL1G33930 Arabidopsis lyrata HOM05D001957 ORTHO05D002015 2.3e-09 66.2 64 46.9
CSS0045992 Camellia sinensis var. sinensis HOM05D001957 ORTHO05D002015 2.3e-09 66.2 47 59.6
Thhalv10018578m.g Eutrema salsugineum HOM05D001957 ORTHO05D002015 3.0e-09 65.9 102 39.2
CSS0043449 Camellia sinensis var. sinensis HOM05D001957 ORTHO05D002015 3.9e-09 65.5 95 41.1
Carub.0002s2342 Capsella rubella HOM05D001957 ORTHO05D002015 3.9e-09 65.5 126 34.9
AT1G20910 Arabidopsis thaliana HOM05D001957 ORTHO05D002015 5.1e-09 65.1 64 45.3
AT1G76510 Arabidopsis thaliana HOM05D001957 ORTHO05D002015 5.1e-09 65.1 125 34.4
CiPaw.07G132400 Carya illinoinensis HOM05D001957 ORTHO05D002015 5.1e-09 65.1 43 65.1
RcHm_v2.0_Chr7g0216981 Rosa chinensis HOM05D001957 ORTHO05D002015 6.7e-09 64.7 58 56.9
MSTRG.24904 Avicennia marina HOM05D001957 ORTHO05D002015 1.5e-08 63.5 39 66.7
Dinv05491 Davidia involucrata HOM05D001957 ORTHO05D002015 1.5e-08 63.5 119 33.6
HanXRQChr12g0367601 Helianthus annuus HOM05D001957 ORTHO05D002015 1.5e-08 63.5 74 44.6
vmacro04429 Vaccinium macrocarpon HOM05D001957 ORTHO05D002015 1.5e-08 63.5 136 34.6
CARHR070060 Cardamine hirsuta HOM05D001957 ORTHO05D002015 1.9e-08 63.2 118 36.4
Potri.005G257300 Populus trichocarpa HOM05D001957 ORTHO05D002015 2.5e-08 62.8 95 38.9
Actinidia37904 Actinidia chinensis HOM05D001957 ORTHO05D002015 3.3e-08 62.4 113 38.1
Eucgr.F01815 Eucalyptus grandis HOM05D001957 ORTHO05D002015 3.3e-08 62.4 104 37.5
PGR119G0941 Punica granatum HOM05D001957 ORTHO05D002015 3.3e-08 62.4 66 47.0
Sabra05G0199200 Salix brachista HOM05D001957 ORTHO05D002015 3.3e-08 62.4 95 38.9
TWI56G0752 Tripterygium wilfordii HOM05D001957 ORTHO05D002015 3.3e-08 62.4 67 47.8
Rhsim07G0258000 Rhododendron simsii HOM05D001957 ORTHO05D002015 5.6e-08 61.6 92 40.2
Hma1.2p1_0810F.1_g222010 Hydrangea macrophylla HOM05D001957 ORTHO05D002015 7.4e-08 61.2 46 56.5
Peaxi162Scf00385g00416 Petunia axillaris HOM05D001957 ORTHO05D002015 7.4e-08 61.2 120 30.8
Haze_03644 Corylus avellana HOM05D001957 ORTHO05D002015 1.6e-07 60.1 70 42.9
FAN13G0926 Fragaria x ananassa HOM05D001957 ORTHO05D002015 1.6e-07 60.1 61 52.5
MD15G1227400 Malus domestica HOM05D001957 ORTHO05D002015 1.6e-07 60.1 157 31.8
TAR625G0279 Trochodendron aralioides HOM05D001957 ORTHO05D002015 1.6e-07 60.1 51 54.9
ECA233G0941 Erigeron canadensis HOM05D001957 ORTHO05D002015 2.1e-07 59.7 107 36.4
Actinidia17084 Actinidia chinensis HOM05D001957 ORTHO05D002015 2.8e-07 59.3 97 36.1
HanXRQChr13g0415871 Helianthus annuus HOM05D001957 ORTHO05D002015 2.8e-07 59.3 114 35.1
PSO017G1652 Papaver somniferum HOM05D001957 ORTHO05D002015 2.8e-07 59.3 68 44.1
Actinidia17983 Actinidia chinensis HOM05D001957 ORTHO05D002015 3.7e-07 58.9 42 61.9
Carub.0001s2038 Capsella rubella HOM05D001957 ORTHO05D002015 3.7e-07 58.9 65 41.5
QL06p053362 Quercus lobata HOM05D001957 ORTHO05D002015 3.7e-07 58.9 48 56.2
TWI36G1773 Tripterygium wilfordii HOM05D001957 ORTHO05D002015 3.7e-07 58.9 96 41.7
CANSAT25G1116 Cannabis sativa HOM05D001957 ORTHO05D002015 4.8e-07 58.5 48 58.3
CAN.G1330.17 Capsicum annuum HOM05D001957 ORTHO05D002015 4.8e-07 58.5 63 42.9
FAN04G2080 Fragaria x ananassa HOM05D001957 ORTHO05D002015 4.8e-07 58.5 61 50.8
Oeu013578.1 Olea europaea HOM05D001957 ORTHO05D002015 4.8e-07 58.5 51 51.0
Oeu013579.1 Olea europaea HOM05D001957 ORTHO05D002015 4.8e-07 58.5 51 51.0
PSO170G0916 Papaver somniferum HOM05D001957 ORTHO05D002015 4.8e-07 58.5 68 44.1
THA.LOC104813732 Tarenaya hassleriana HOM05D001957 ORTHO05D002015 4.8e-07 58.5 124 32.3
Actinidia33599 Actinidia chinensis HOM05D001957 ORTHO05D002015 6.2e-07 58.2 113 33.6
MELO3C013704.2 Cucumis melo HOM05D001957 ORTHO05D002015 6.2e-07 58.2 63 47.6
Solyc04g082820.4 Solanum lycopersicum HOM05D001957 ORTHO05D002015 6.2e-07 58.2 129 30.2
Sopen04g036460 Solanum pennellii HOM05D001957 ORTHO05D002015 6.2e-07 58.2 129 30.2
MSTRG.22077 Avicennia marina HOM05D001957 ORTHO05D002015 8.1e-07 57.8 44 59.1
MSTRG.24521 Avicennia marina HOM05D001957 ORTHO05D002015 8.1e-07 57.8 44 59.1
BcaC08g47160 Brassica carinata HOM05D001957 ORTHO05D002015 8.1e-07 57.8 58 48.3
Eucgr.I02198 Eucalyptus grandis HOM05D001957 ORTHO05D002015 8.1e-07 57.8 67 44.8
Manes.02G117200 Manihot esculenta HOM05D001957 ORTHO05D002015 8.1e-07 57.8 115 33.9
Cpa.g.sc70.18 Carica papaya HOM05D001957 ORTHO05D002015 1.1e-06 57.4 49 53.1
CsaV3_3G000100 Cucumis sativus L. HOM05D001957 ORTHO05D002015 1.1e-06 57.4 63 47.6
CsaV3_UNG149160 Cucumis sativus L. HOM05D001957 ORTHO05D002015 1.1e-06 57.4 63 47.6
Duzib187G1381 Durio zibethinus HOM05D001957 ORTHO05D002015 1.1e-06 57.4 66 39.4
FvH4_5g29710 Fragaria vesca HOM05D001957 ORTHO05D002015 1.1e-06 57.4 101 39.6
FAN18G2634 Fragaria x ananassa HOM05D001957 ORTHO05D002015 1.1e-06 57.4 101 39.6
Lsat_1_v5_gn_3_48380 Lactuca sativa HOM05D001957 ORTHO05D002015 1.1e-06 57.4 57 49.1
Sc15g0004030 Simmondsia chinensis HOM05D001957 ORTHO05D002015 1.1e-06 57.4 43 58.1
THA.LOC104804300 Tarenaya hassleriana HOM05D001957 ORTHO05D002015 1.1e-06 57.4 72 38.9
Thhalv10007750m.g Eutrema salsugineum HOM05D001957 ORTHO05D002015 1.4e-06 57.0 113 32.7
HanXRQChr08g0216791 Helianthus annuus HOM05D001957 ORTHO05D002015 1.4e-06 57.0 90 37.8
Sp1g18610 Schrenkiella parvula HOM05D001957 ORTHO05D002015 1.4e-06 57.0 95 35.8
Solyc04g025930.3 Solanum lycopersicum HOM05D001957 ORTHO05D002015 1.4e-06 57.0 44 54.5
Aa31LG7G5070 Aethionema arabicum HOM05D001957 ORTHO05D002015 1.8e-06 56.6 100 36.0
Gohir.A02G179300 Gossypium hirsutum HOM05D001957 ORTHO05D002015 1.8e-06 56.6 97 35.1
Gohir.D03G000400 Gossypium hirsutum HOM05D001957 ORTHO05D002015 1.8e-06 56.6 97 35.1
Gorai.003G000800 Gossypium raimondii HOM05D001957 ORTHO05D002015 1.8e-06 56.6 97 35.1
HanXRQChr15g0479761 Helianthus annuus HOM05D001957 ORTHO05D002015 1.8e-06 56.6 57 47.4
GSVIVG01013439001 Vitis vinifera HOM05D001957 ORTHO05D002015 1.8e-06 56.6 105 35.2
Actinidia20589 Actinidia chinensis HOM05D001957 ORTHO05D002015 2.4e-06 56.2 42 59.5
CANSAT25G0858 Cannabis sativa HOM05D001957 ORTHO05D002015 2.4e-06 56.2 110 33.6
FAN08G2777 Fragaria x ananassa HOM05D001957 ORTHO05D002015 2.4e-06 56.2 61 50.8
Oeu030365.2 Olea europaea HOM05D001957 ORTHO05D002015 2.4e-06 56.2 52 51.9
Psat2g147320 Pisum sativum HOM05D001957 ORTHO05D002015 2.4e-06 56.2 39 64.1
Sed0020142 Sechium edule HOM05D001957 ORTHO05D002015 2.4e-06 56.2 49 53.1
FAN28G1399 Fragaria x ananassa HOM05D001957 ORTHO05D002015 3.1e-06 55.8 124 31.5
Lj2g0005573 Lotus japonicus HOM05D001957 ORTHO05D002015 3.1e-06 55.8 63 46.0
Prupe.7G187900 Prunus persica HOM05D001957 ORTHO05D002015 3.1e-06 55.8 72 37.5
TAR628G1369 Trochodendron aralioides HOM05D001957 ORTHO05D002015 3.1e-06 55.8 41 61.0
unitig_21.g20853 Utricularia gibba HOM05D001957 ORTHO05D002015 3.1e-06 55.8 98 36.7
Cfa007116 Carpinus fangiana HOM05D001957 ORTHO05D002015 4.0e-06 55.5 158 32.3
THA.LOC104819703 Tarenaya hassleriana HOM05D001957 ORTHO05D002015 4.0e-06 55.5 160 26.9
unitig_744.g24080 Utricularia gibba HOM05D001957 ORTHO05D002015 4.0e-06 55.5 120 36.7
AL3G50280 Arabidopsis lyrata HOM05D001957 ORTHO05D002015 5.3e-06 55.1 73 38.4
AT2G17410 Arabidopsis thaliana HOM05D001957 ORTHO05D002015 5.3e-06 55.1 73 38.4
FvH4_1g09750 Fragaria vesca HOM05D001957 ORTHO05D002015 5.3e-06 55.1 128 32.0
FAN19G0305 Fragaria x ananassa HOM05D001957 ORTHO05D002015 5.3e-06 55.1 128 32.0
FAN23G2324 Fragaria x ananassa HOM05D001957 ORTHO05D002015 5.3e-06 55.1 128 32.0
FAN26G2801 Fragaria x ananassa HOM05D001957 ORTHO05D002015 5.3e-06 55.1 128 32.0
Glyma.11G088400 Glycine max HOM05D001957 ORTHO05D002015 5.3e-06 55.1 39 61.5
Lalb_Chr09g0324881 Lupinus albus HOM05D001957 ORTHO05D002015 5.3e-06 55.1 77 40.3
Nn5g31062 Nelumbo nucifera HOM05D001957 ORTHO05D002015 5.3e-06 55.1 46 54.3
vmacro02348 Vaccinium macrocarpon HOM05D001957 ORTHO05D002015 5.3e-06 55.1 39 59.0
Ca_25021_v3 Cicer arietinum L. HOM05D001957 ORTHO05D002015 6.9e-06 54.7 39 61.5
ClCG10G000090 Citrullus lanatus HOM05D001957 ORTHO05D002015 6.9e-06 54.7 126 30.2
Lalb_Chr16g0380231 Lupinus albus HOM05D001957 ORTHO05D002015 6.9e-06 54.7 77 36.4
SalBow7G1766 Salvia bowleyana HOM05D001957 ORTHO05D002015 6.9e-06 54.7 43 55.8
Duzib147G1324 Durio zibethinus HOM05D001957 ORTHO05D002015 9.0e-06 54.3 97 34.0
Glyma.01G156400 Glycine max HOM05D001957 ORTHO05D002015 9.0e-06 54.3 114 35.1
Lj5C170G8 Lonicera japonica HOM05D001957 ORTHO05D002015 9.0e-06 54.3 39 61.5
RcHm_v2.0_Chr2g0096711 Rosa chinensis HOM05D001957 ORTHO05D002015 9.0e-06 54.3 119 32.8


User provided reference genes

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