Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G017400 Phaseolus vulgaris HOM05D006697 ORTHO05D008161 7.8e-135 483.8 243 100.0
VMungo1127G1290 Vigna mungo HOM05D006697 ORTHO05D008161 1.4e-128 463.0 241 96.7
TPR.G29429 Trifolium pratense HOM05D006697 ORTHO05D008161 2.1e-116 422.5 241 86.7
Glyma.11G110500 Glycine max HOM05D006697 ORTHO05D008161 1.4e-115 419.9 259 83.4
Lj3g0000289 Lotus japonicus HOM05D006697 ORTHO05D008161 2.0e-114 416.0 240 87.1
arahy.Tifrunner.gnm1.ann1.D2QDKL Arachis hypogaea HOM05D006697 ORTHO05D008161 1.7e-113 412.9 240 83.3
Ca_26167_v3 Cicer arietinum L. HOM05D006697 ORTHO05D008161 2.2e-113 412.5 236 87.7
arahy.Tifrunner.gnm1.ann1.6HI5DG Arachis hypogaea HOM05D006697 ORTHO05D008161 1.1e-112 410.2 240 83.8
arahy.Tifrunner.gnm1.ann1.L3LJ1W Arachis hypogaea HOM05D006697 ORTHO05D008161 5.4e-112 407.9 240 83.3
Medtr2g010410 Medicago truncatula HOM05D006697 ORTHO05D008161 3.0e-110 402.1 243 83.5
Psat1g020920 Pisum sativum HOM05D006697 ORTHO05D008161 2.5e-109 399.1 237 83.1
Glyma.12G014500 Glycine max HOM05D006697 ORTHO05D008161 5.1e-94 348.2 198 86.9
TWI12G1402 Tripterygium wilfordii HOM05D006697 ORTHO05D008161 3.1e-91 339.0 240 67.5
QL09p001838 Quercus lobata HOM05D006697 ORTHO05D008161 1.7e-89 333.2 239 67.8
QL11p001773 Quercus lobata HOM05D006697 ORTHO05D008161 1.1e-88 330.5 239 67.4
Potri.001G377100 Populus trichocarpa HOM05D006697 ORTHO05D008161 1.4e-88 330.1 244 68.0
CiPaw.04G009300 Carya illinoinensis HOM05D006697 ORTHO05D008161 9.3e-88 327.4 240 68.8
Actinidia03526 Actinidia chinensis HOM05D006697 ORTHO05D008161 1.6e-87 326.6 248 65.7
GSVIVG01036291001 Vitis vinifera HOM05D006697 ORTHO05D008161 1.6e-87 326.6 221 69.2
MBI04_g46123_MAGBIO Magnolia biondii HOM05D006697 ORTHO05D008161 2.1e-87 326.2 225 69.3
Atru.chr13.2506 Acer truncatum HOM05D006697 ORTHO05D008161 2.7e-87 325.9 240 67.1
SGA_v2.0_scaffold24G10647 Striga asiatica HOM05D006697 ORTHO05D008161 3.5e-87 325.5 243 64.6
Lj5C630T5 Lonicera japonica HOM05D006697 ORTHO05D008161 6.0e-87 324.7 227 67.8
Atru.chr13.2494 Acer truncatum HOM05D006697 ORTHO05D008161 7.9e-87 324.3 240 66.7
COL.COLO4_05203 Corchorus olitorius HOM05D006697 ORTHO05D008161 1.0e-86 323.9 241 65.1
Duzib213G0772 Durio zibethinus HOM05D006697 ORTHO05D008161 1.0e-86 323.9 228 69.3
Dinv22109 Davidia involucrata HOM05D006697 ORTHO05D008161 1.3e-86 323.6 240 64.6
AUR62013379 Chenopodium quinoa HOM05D006697 ORTHO05D008161 2.3e-86 322.8 236 65.3
AUR62038532 Chenopodium quinoa HOM05D006697 ORTHO05D008161 3.9e-86 322.0 236 65.3
Thecc.08G178500 Theobroma cacao HOM05D006697 ORTHO05D008161 3.9e-86 322.0 243 65.0
Sabra16G0248400 Salix brachista HOM05D006697 ORTHO05D008161 1.1e-85 320.5 243 65.8
CANSAT21G1464 Cannabis sativa HOM05D006697 ORTHO05D008161 1.5e-85 320.1 233 64.8
Migut.C01379 Erythranthe guttata HOM05D006697 ORTHO05D008161 1.5e-85 320.1 240 64.2
Hma1.2p1_0417F.1_g148910 Hydrangea macrophylla HOM05D006697 ORTHO05D008161 1.9e-85 319.7 227 65.2
CANSAT21G1945 Cannabis sativa HOM05D006697 ORTHO05D008161 2.5e-85 319.3 228 66.2
Gorai.009G352800 Gossypium raimondii HOM05D006697 ORTHO05D008161 3.3e-85 318.9 226 66.8
Gohir.D05G329400 Gossypium hirsutum HOM05D006697 ORTHO05D008161 4.3e-85 318.5 226 66.8
EL10Ac1g01267 Beta vulgaris HOM05D006697 ORTHO05D008161 5.6e-85 318.2 227 65.2
Sc23g0000070 Simmondsia chinensis HOM05D006697 ORTHO05D008161 9.6e-85 317.4 226 66.8
Lj7A235T22 Lonicera japonica HOM05D006697 ORTHO05D008161 1.6e-84 316.6 221 68.3
PGR044G1078 Punica granatum HOM05D006697 ORTHO05D008161 1.6e-84 316.6 225 68.4
Aqoxy7G01951 Aquilegia oxysepala HOM05D006697 ORTHO05D008161 4.8e-84 315.1 240 62.5
Ciclev10024137m.g Citrus clementina HOM05D006697 ORTHO05D008161 8.1e-84 314.3 221 66.5
Ah.05g170350 Amaranthus hybridus HOM05D006697 ORTHO05D008161 1.1e-83 313.9 227 65.2
ClCG11G008450 Citrullus lanatus HOM05D006697 ORTHO05D008161 6.9e-83 311.2 224 66.1
CsaV3_2G033200 Cucumis sativus L. HOM05D006697 ORTHO05D008161 2.0e-82 309.7 224 66.1
Thhalv10008579m.g Eutrema salsugineum HOM05D006697 ORTHO05D008161 2.6e-82 309.3 240 62.9
Sed0014406 Sechium edule HOM05D006697 ORTHO05D008161 4.5e-82 308.5 224 66.1
HanXRQChr08g0227531 Helianthus annuus HOM05D006697 ORTHO05D008161 1.3e-81 307.0 228 62.7
PGR044G1872 Punica granatum HOM05D006697 ORTHO05D008161 1.7e-81 306.6 225 66.2
Aa31LG2G660 Aethionema arabicum HOM05D006697 ORTHO05D008161 2.9e-81 305.8 240 63.3
CARHR013100 Cardamine hirsuta HOM05D006697 ORTHO05D008161 6.4e-81 304.7 225 65.3
FvH4_2g00851 Fragaria vesca HOM05D006697 ORTHO05D008161 8.4e-81 304.3 241 63.1
THA.LOC104814608 Tarenaya hassleriana HOM05D006697 ORTHO05D008161 1.4e-80 303.5 225 65.3
Haze_13956 Corylus avellana HOM05D006697 ORTHO05D008161 7.1e-80 301.2 219 68.5
AL1G24400 Arabidopsis lyrata HOM05D006697 ORTHO05D008161 9.3e-80 300.8 225 64.0
FAN27G1710 Fragaria x ananassa HOM05D006697 ORTHO05D008161 9.3e-80 300.8 241 62.7
AT1G12790 Arabidopsis thaliana HOM05D006697 ORTHO05D008161 4.6e-79 298.5 243 60.9
Cpa.g.sc21.84 Carica papaya HOM05D006697 ORTHO05D008161 7.9e-79 297.7 233 60.1
RcHm_v2.0_Chr6g0251241 Rosa chinensis HOM05D006697 ORTHO05D008161 7.9e-79 297.7 234 62.0
Sp1g11350 Schrenkiella parvula HOM05D006697 ORTHO05D008161 7.9e-79 297.7 240 60.8
Peaxi162Scf00818g00536 Petunia axillaris HOM05D006697 ORTHO05D008161 1.8e-78 296.6 230 62.2
PSO170G3180 Papaver somniferum HOM05D006697 ORTHO05D008161 8.7e-78 294.3 240 58.3
MD05G1004600 Malus domestica HOM05D006697 ORTHO05D008161 1.1e-77 293.9 235 62.6
Sopen06g023040 Solanum pennellii HOM05D006697 ORTHO05D008161 1.1e-77 293.9 247 58.7
PGSC0003DMG400033140 Solanum tuberosum HOM05D006697 ORTHO05D008161 1.5e-77 293.5 241 59.3
Carub.0001s1251 Capsella rubella HOM05D006697 ORTHO05D008161 1.9e-77 293.1 233 59.7
Cc10_g08640 Coffea canephora HOM05D006697 ORTHO05D008161 3.3e-77 292.4 221 64.3
Solyc06g064560.4 Solanum lycopersicum HOM05D006697 ORTHO05D008161 9.6e-77 290.8 247 59.1
vmacro17835 Vaccinium macrocarpon HOM05D006697 ORTHO05D008161 4.8e-76 288.5 236 61.4
Os05g0588200 Oryza sativa ssp. japonica HOM05D006697 ORTHO05D008161 1.4e-75 287.0 224 62.9
vmacro14431 Vaccinium macrocarpon HOM05D006697 ORTHO05D008161 1.5e-74 283.5 264 56.4
Prupe.8G007100 Prunus persica HOM05D006697 ORTHO05D008161 2.0e-74 283.1 243 62.1
HPP92_021529 Vanilla planifolia HOM05D006697 ORTHO05D008161 2.6e-74 282.7 240 58.3
CAN.G14.56 Capsicum annuum HOM05D006697 ORTHO05D008161 4.5e-74 282.0 221 63.3
HPP92_021490 Vanilla planifolia HOM05D006697 ORTHO05D008161 7.6e-74 281.2 240 57.9
Manes.02G201500 Manihot esculenta HOM05D006697 ORTHO05D008161 2.5e-72 276.2 231 59.3
A06p08910 Brassica napus HOM05D000776 ORTHO05D008161 3.2e-72 275.8 228 57.5
arahy.Tifrunner.gnm1.ann1.3DZ399 Arachis hypogaea HOM05D006697 ORTHO05D008161 5.5e-72 275.0 240 62.5
FAN20G2680 Fragaria x ananassa HOM05D006697 ORTHO05D008161 7.1e-72 274.6 216 62.5
BraA06t24084Z Brassica rapa HOM05D000776 ORTHO05D008161 1.2e-71 273.9 228 57.5
Hund16916 Selenicereus undatus HOM05D006697 ORTHO05D008161 1.2e-71 273.9 226 61.5
Nn8g39331 Nelumbo nucifera HOM05D006697 ORTHO05D008161 2.1e-71 273.1 233 57.9
SalBow7G2072 Salvia bowleyana HOM05D006697 ORTHO05D008161 6.1e-71 271.6 293 50.5
ECA247G0072 Erigeron canadensis HOM05D006697 ORTHO05D008161 2.3e-70 269.6 219 60.3
Nitab4.5_0002654g0040 Nicotiana tabacum HOM05D006697 ORTHO05D008161 1.5e-69 266.9 249 56.2
BcaC05g25157 Brassica carinata HOM05D000776 ORTHO05D008161 1.3e-68 263.8 226 59.3
C05p10520 Brassica napus HOM05D000776 ORTHO05D008161 1.3e-68 263.8 226 59.3
SGA_v2.0_scaffold147G36299 Striga asiatica HOM05D006697 ORTHO05D008161 1.1e-67 260.8 229 59.0
Zm00001eb345090 Zea mays HOM05D006697 ORTHO05D008161 1.1e-67 260.8 228 56.6
Lalb_Chr01g0000751 Lupinus albus HOM05D006697 ORTHO05D008161 1.8e-67 260.0 150 82.0
BolC5t29798H Brassica oleracea HOM05D000776 ORTHO05D008161 4.1e-67 258.8 230 58.7
Lj7C240T16 Lonicera japonica HOM05D006697 ORTHO05D008161 6.9e-67 258.1 222 59.5
BcaC05g25114 Brassica carinata HOM05D006697 ORTHO05D008161 1.3e-65 253.8 217 59.4
CSS0025148 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 1.4e-64 250.4 226 58.8
CSS0011722 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 2.5e-64 249.6 228 57.5
DCAR_016528 Daucus carota HOM05D006697 ORTHO05D008161 1.6e-63 246.9 188 61.2
arahy.Tifrunner.gnm1.ann1.9U8FPX Arachis hypogaea HOM05D006697 ORTHO05D008161 4.6e-63 245.4 218 61.9
TAR625G0361 Trochodendron aralioides HOM05D006697 ORTHO05D008161 1.4e-62 243.8 210 58.6
MD05G1003900 Malus domestica HOM05D006697 ORTHO05D008161 6.7e-62 241.5 194 60.8
Nitab4.5_0010319g0040 Nicotiana tabacum HOM05D006697 ORTHO05D008161 8.2e-60 234.6 240 52.9
Rhsim08G0116200 Rhododendron simsii HOM05D006697 ORTHO05D008161 4.1e-59 232.3 261 49.4
CAN.G27.3 Capsicum annuum HOM05D006697 ORTHO05D008161 2.5e-56 223.0 197 57.9
Gohir.A05G328400 Gossypium hirsutum HOM05D006697 ORTHO05D008161 5.1e-54 215.3 150 65.3
arahy.Tifrunner.gnm1.ann1.K2UT7U Arachis hypogaea HOM05D006697 ORTHO05D008161 2.0e-53 213.4 123 87.0
SHI16724 Sapria himalayana HOM05D006697 ORTHO05D008161 5.7e-53 211.8 282 44.0
ATR0083G058 Amborella trichopoda HOM05D006697 ORTHO05D008161 1.8e-51 206.8 183 56.8
arahy.Tifrunner.gnm1.ann1.GZG3VH Arachis hypogaea HOM05D006697 ORTHO05D008161 1.3e-49 200.7 179 61.5
Lsat_1_v5_gn_1_24901 Lactuca sativa HOM05D006697 ORTHO05D008161 1.7e-49 200.3 152 61.2
Eucgr.F04072 Eucalyptus grandis HOM05D006697 ORTHO05D008161 5.0e-49 198.7 159 62.3
MELO3C029791.2 Cucumis melo HOM05D006697 ORTHO05D008161 2.5e-40 169.9 169 55.6
MSTRG.1598 Avicennia marina HOM05D006697 ORTHO05D008161 1.2e-39 167.5 121 66.9
unitig_32.g11220 Utricularia gibba HOM05D000486 ORTHO05D000375 2.1e-39 166.8 170 52.4
AL1G24230 Arabidopsis lyrata HOM05D006697 ORTHO05D008161 1.4e-35 154.1 132 59.8
unitig_32.g11211 Utricularia gibba HOM05D006697 ORTHO05D008161 1.4e-35 154.1 119 64.7
SMO119G0513 Selaginella moellendorffii HOM05D006697 ORTHO05D008161 2.3e-30 136.7 218 33.9
Lalb_Chr01g0000761 Lupinus albus HOM05D006697 ORTHO05D008161 2.4e-27 126.7 79 82.3
Mapoly0068s0032 Marchantia polymorpha HOM05D006697 ORTHO05D008161 8.6e-25 118.2 223 30.5
arahy.Tifrunner.gnm1.ann1.D8HQTE Arachis hypogaea HOM05D006697 ORTHO05D008161 3.7e-20 102.8 70 65.7
Medtr2g451120 Medicago truncatula HOM05D006697 ORTHO05D008161 4.3e-16 89.4 95 53.7
RcHm_v2.0_Chr6g0275321 Rosa chinensis HOM05D006697 ORTHO05D008161 2.1e-15 87.0 104 44.2


User provided reference genes

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