Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G096200 Phaseolus vulgaris HOM05D005745 ORTHO05D006857 1.1e-150 536.6 261 100.0
VMungo0331G1900 Vigna mungo HOM05D005745 ORTHO05D006857 2.3e-132 475.7 261 88.1
Lj3g0021692 Lotus japonicus HOM05D005745 ORTHO05D006857 7.1e-118 427.6 261 81.2
Ca_23656_v3 Cicer arietinum L. HOM05D005745 ORTHO05D006857 6.6e-116 421.0 261 79.7
Medtr8g031440 Medicago truncatula HOM05D005745 ORTHO05D006857 6.6e-116 421.0 261 78.9
Lalb_Chr04g0256771 Lupinus albus HOM05D005745 ORTHO05D006857 1.1e-113 413.7 268 76.5
Psat4g154320 Pisum sativum HOM05D005745 ORTHO05D006857 5.8e-112 407.9 261 76.6
Lalb_Chr10g0097191 Lupinus albus HOM05D005745 ORTHO05D006857 8.7e-108 394.0 259 75.3
arahy.Tifrunner.gnm1.ann1.5YG8M2 Arachis hypogaea HOM05D005745 ORTHO05D006857 1.6e-106 389.8 258 73.3
Glyma.03G013600 Glycine max HOM05D005745 ORTHO05D006857 2.1e-106 389.4 261 76.2
arahy.Tifrunner.gnm1.ann1.JLYP5G Arachis hypogaea HOM05D005745 ORTHO05D006857 2.8e-106 389.0 258 73.6
TPR.G39633 Trifolium pratense HOM05D005745 ORTHO05D006857 3.8e-103 378.6 226 80.5
CSS0038489 Camellia sinensis var. sinensis HOM05D005745 ORTHO05D006857 4.9e-95 351.7 256 66.4
CSS0024424 Camellia sinensis var. sinensis HOM05D005745 ORTHO05D006857 1.2e-93 347.1 256 66.0
Actinidia10034 Actinidia chinensis HOM05D005745 ORTHO05D006857 6.0e-93 344.7 274 62.8
Hma1.2p1_0001F.1_g001520 Hydrangea macrophylla HOM05D005745 ORTHO05D006857 1.3e-92 343.6 274 62.0
GSVIVG01026870001 Vitis vinifera HOM05D005745 ORTHO05D006857 3.0e-92 342.4 294 61.2
QL08p049437 Quercus lobata HOM05D005745 ORTHO05D006857 3.9e-92 342.0 276 64.5
Actinidia20926 Actinidia chinensis HOM05D005745 ORTHO05D006857 5.1e-92 341.7 274 62.8
Ciclev10020429m.g Citrus clementina HOM05D005745 ORTHO05D006857 2.8e-90 335.9 269 64.7
Cpa.g.sc18.234 Carica papaya HOM05D005745 ORTHO05D006857 2.4e-89 332.8 268 63.4
Sabra14G0059300 Salix brachista HOM05D005745 ORTHO05D006857 2.2e-87 326.2 283 59.0
Dinv43791 Davidia involucrata HOM05D005745 ORTHO05D006857 1.1e-86 323.9 257 63.0
Gohir.A12G105400 Gossypium hirsutum HOM05D005745 ORTHO05D006857 1.1e-86 323.9 258 62.0
Gohir.A12G105450 Gossypium hirsutum HOM05D005745 ORTHO05D006857 1.1e-86 323.9 258 62.0
Gohir.D12G109300 Gossypium hirsutum HOM05D005745 ORTHO05D006857 4.2e-86 322.0 258 62.4
Gorai.008G118400 Gossypium raimondii HOM05D005745 ORTHO05D006857 6.1e-85 318.2 258 61.6
CiPaw.02G029400 Carya illinoinensis HOM05D005745 ORTHO05D006857 7.9e-85 317.8 276 60.1
BcaB03g13612 Brassica carinata HOM05D005745 ORTHO05D006857 1.0e-84 317.4 269 61.7
Nn6g33496 Nelumbo nucifera HOM05D005745 ORTHO05D006857 1.0e-84 317.4 277 58.8
A10p00280 Brassica napus HOM05D005745 ORTHO05D006857 2.3e-84 316.2 276 60.5
EL10Ac1g00543 Beta vulgaris HOM05D005745 ORTHO05D006857 3.0e-84 315.8 279 59.5
Thhalv10007725m.g Eutrema salsugineum HOM05D005745 ORTHO05D006857 6.7e-84 314.7 278 59.7
TAR367G0002 Trochodendron aralioides HOM05D005745 ORTHO05D006857 8.7e-84 314.3 278 58.3
AL1G10580 Arabidopsis lyrata HOM05D005745 ORTHO05D006857 2.5e-83 312.8 281 58.4
Hund27291 Selenicereus undatus HOM05D005745 ORTHO05D006857 5.7e-83 311.6 293 56.0
Manes.01G259400 Manihot esculenta HOM05D005745 ORTHO05D006857 1.3e-82 310.5 274 58.8
CARHR000560 Cardamine hirsuta HOM05D005745 ORTHO05D006857 1.6e-82 310.1 278 59.7
FvH4_7g13861 Fragaria vesca HOM05D005745 ORTHO05D006857 1.6e-82 310.1 258 62.8
Carub.0001s0045 Capsella rubella HOM05D005745 ORTHO05D006857 2.8e-82 309.3 276 58.0
FAN10G4182 Fragaria x ananassa HOM05D005745 ORTHO05D006857 3.7e-82 308.9 258 62.4
BolC5t28819H Brassica oleracea HOM05D005745 ORTHO05D006857 6.3e-82 308.1 285 59.3
MD01G1055100 Malus domestica HOM05D005745 ORTHO05D006857 1.1e-81 307.4 271 58.7
Sp1g00540 Schrenkiella parvula HOM05D005745 ORTHO05D006857 1.4e-81 307.0 275 57.5
FAN06G1549 Fragaria x ananassa HOM05D005745 ORTHO05D006857 3.1e-81 305.8 258 62.0
TWI23G0914 Tripterygium wilfordii HOM05D005745 ORTHO05D006857 5.3e-81 305.1 309 53.4
CANSAT56G0536 Cannabis sativa HOM05D005745 ORTHO05D006857 9.0e-81 304.3 278 57.6
SGA_v2.0_scaffold277G46666 Striga asiatica HOM05D005745 ORTHO05D006857 1.2e-80 303.9 258 60.5
DCAR_015932 Daucus carota HOM05D005745 ORTHO05D006857 2.0e-80 303.1 276 56.2
vmacro13297 Vaccinium macrocarpon HOM05D005745 ORTHO05D006857 2.0e-80 303.1 277 56.7
Sc26g0000960 Simmondsia chinensis HOM05D005745 ORTHO05D006857 2.6e-80 302.8 270 58.1
Cfa003949 Carpinus fangiana HOM05D000683 ORTHO05D000507 3.4e-80 302.4 242 64.9
MBI17_g21972_MAGBIO Magnolia biondii HOM05D005745 ORTHO05D006857 4.5e-80 302.0 262 57.6
C05p00290 Brassica napus HOM05D005745 ORTHO05D006857 7.7e-80 301.2 300 55.3
CsaV3_6G000430 Cucumis sativus L. HOM05D005745 ORTHO05D006857 2.9e-79 299.3 259 59.5
Cc02_g37770 Coffea canephora HOM05D005745 ORTHO05D006857 3.8e-79 298.9 270 56.3
AUR62033312 Chenopodium quinoa HOM05D005745 ORTHO05D006857 6.5e-79 298.1 277 55.2
BraA10t42305Z Brassica rapa HOM05D005745 ORTHO05D006857 8.5e-79 297.7 297 56.6
Aa31LG1G11130 Aethionema arabicum HOM05D005745 ORTHO05D006857 9.4e-78 294.3 304 53.6
Sopen05g028140 Solanum pennellii HOM05D005745 ORTHO05D006857 9.4e-78 294.3 274 55.5
Aqoxy7G00357 Aquilegia oxysepala HOM05D005745 ORTHO05D006857 2.1e-77 293.1 274 55.5
CiPaw.02G029100 Carya illinoinensis HOM05D005745 ORTHO05D006857 2.1e-77 293.1 276 56.9
AUR62033347 Chenopodium quinoa HOM05D005745 ORTHO05D006857 3.6e-77 292.4 277 55.6
PGR042G0923 Punica granatum HOM05D005745 ORTHO05D006857 3.6e-77 292.4 281 55.9
MSTRG.17255 Avicennia marina HOM05D005745 ORTHO05D006857 4.6e-77 292.0 265 57.0
Haze_15472 Corylus avellana HOM05D005745 ORTHO05D006857 1.0e-76 290.8 272 57.7
Solyc05g048810.4 Solanum lycopersicum HOM05D005745 ORTHO05D006857 1.0e-76 290.8 274 55.8
PGSC0003DMG400021653 Solanum tuberosum HOM05D005745 ORTHO05D006857 1.0e-76 290.8 274 54.4
Peaxi162Scf00191g01322 Petunia axillaris HOM05D005745 ORTHO05D006857 1.8e-76 290.0 271 55.0
RcHm_v2.0_Chr1g0354081 Rosa chinensis HOM05D005745 ORTHO05D006857 1.8e-76 290.0 259 61.0
CAN.G1535.1 Capsicum annuum HOM05D005745 ORTHO05D006857 2.3e-76 289.7 274 54.0
PSO478G4474 Papaver somniferum HOM05D005745 ORTHO05D006857 6.7e-76 288.1 278 53.2
PSO782G5186 Papaver somniferum HOM05D005745 ORTHO05D006857 1.1e-75 287.3 278 52.9
Eucgr.E00173 Eucalyptus grandis HOM05D005745 ORTHO05D006857 1.5e-75 287.0 275 53.5
ClCG06G003860 Citrullus lanatus HOM05D005745 ORTHO05D006857 2.2e-74 283.1 328 47.9
Oeu056358.1 Olea europaea HOM05D005745 ORTHO05D006857 2.8e-74 282.7 242 61.2
Glyma.07G073300 Glycine max HOM05D005745 ORTHO05D006857 4.8e-74 282.0 155 90.3
Eucgr.E00169 Eucalyptus grandis HOM05D005745 ORTHO05D006857 8.2e-74 281.2 275 52.7
Rhsim07G0017300 Rhododendron simsii HOM05D000683 ORTHO05D000507 8.2e-74 281.2 253 60.9
Lsat_1_v5_gn_7_5060 Lactuca sativa HOM05D005745 ORTHO05D006857 1.8e-73 280.0 272 54.0
THA.LOC104817020 Tarenaya hassleriana HOM05D005745 ORTHO05D006857 9.1e-73 277.7 247 59.5
Nitab4.5_0007346g0010 Nicotiana tabacum HOM05D005745 ORTHO05D006857 1.2e-72 277.3 293 52.2
ECA236G3051 Erigeron canadensis HOM05D005745 ORTHO05D006857 1.0e-71 274.2 272 53.3
AT1G01760 Arabidopsis thaliana HOM05D005745 ORTHO05D006857 1.7e-71 273.5 246 58.5
MBI18_g01486_MAGBIO Magnolia biondii HOM05D005745 ORTHO05D006857 6.5e-71 271.6 278 51.8
AUR62004330 Chenopodium quinoa HOM05D005745 ORTHO05D006857 1.6e-69 266.9 274 51.5
Potri.014G081400 Populus trichocarpa HOM05D005745 ORTHO05D006857 1.6e-69 266.9 214 63.6
Lj7C516G5 Lonicera japonica HOM05D005745 ORTHO05D006857 1.1e-67 260.8 213 63.8
Duzib138G1514 Durio zibethinus HOM05D005745 ORTHO05D006857 4.4e-67 258.8 200 65.0
Sed0009525 Sechium edule HOM05D005745 ORTHO05D006857 1.7e-63 246.9 198 63.6
ATR0594G105 Amborella trichopoda HOM05D005745 ORTHO05D006857 1.1e-62 244.2 229 55.0
AUR62003100 Chenopodium quinoa HOM05D005745 ORTHO05D006857 7.2e-62 241.5 180 63.3
Ah.05g176680 Amaranthus hybridus HOM05D005745 ORTHO05D006857 3.6e-61 239.2 240 52.9
Zm00001eb067600 Zea mays HOM05D005745 ORTHO05D006857 1.0e-60 237.7 263 48.3
AUR62034353 Chenopodium quinoa HOM05D005745 ORTHO05D006857 1.8e-60 236.9 185 61.6
HanXRQChr04g0121611 Helianthus annuus HOM05D005745 ORTHO05D006857 4.0e-60 235.7 213 57.7
Zm00001eb420790 Zea mays HOM05D005745 ORTHO05D006857 1.5e-59 233.8 261 47.5
CiPaw.02G029200 Carya illinoinensis HOM05D005745 ORTHO05D006857 1.7e-58 230.3 216 58.8
FAN03G1898 Fragaria x ananassa HOM05D005745 ORTHO05D006857 8.2e-58 228.0 258 50.4
Nitab4.5_0002262g0010 Nicotiana tabacum HOM05D005745 ORTHO05D006857 1.8e-57 226.9 186 58.6
HPP92_001499 Vanilla planifolia HOM05D005745 ORTHO05D006857 3.6e-53 212.6 230 48.7
MELO3C021221.2 Cucumis melo HOM05D005745 ORTHO05D006857 1.5e-51 207.2 184 56.0
unitig_26.g9734 Utricularia gibba HOM05D005745 ORTHO05D006857 1.5e-51 207.2 151 67.5
CDE06G1611 Ceratophyllum demersum HOM05D005745 ORTHO05D006857 2.2e-50 203.4 262 43.5
Atru.BG.56.p Acer truncatum HOM05D005745 ORTHO05D006857 1.6e-48 197.2 154 66.2
Mapoly0023s0060 Marchantia polymorpha HOM05D005745 ORTHO05D006857 1.6e-48 197.2 244 43.4
Zm00001eb191880 Zea mays HOM05D009386 ORTHO05D006857 1.3e-47 194.1 203 50.2
Prupe.2G164800 Prunus persica HOM05D005745 ORTHO05D006857 5.5e-46 188.7 182 56.0
AagrBONN_evm.TU.Sc2ySwM_362.160 Anthoceros agrestis HOM05D005745 ORTHO05D006857 1.2e-43 181.0 205 46.8
SEGI_32011 Sequoiadendron giganteum HOM05D005745 ORTHO05D006857 1.3e-42 177.6 194 49.0
Pp3c4_14060 Physcomitrium patens HOM05D005745 ORTHO05D006857 1.8e-41 173.7 274 38.0
SMO266G0032 Selaginella moellendorffii HOM05D005745 ORTHO05D006857 1.8e-41 173.7 267 39.3
Os04g0683500 Oryza sativa ssp. japonica HOM05D005745 ORTHO05D006857 6.8e-36 155.2 157 51.0
MD07G1140200 Malus domestica HOM05D005745 ORTHO05D006857 4.9e-34 149.1 144 57.6
AUR62034238 Chenopodium quinoa HOM05D002177 ORTHO05D002257 1.1e-33 147.9 127 55.9
AUR62019766 Chenopodium quinoa HOM05D005745 ORTHO05D006857 2.7e-32 143.3 108 60.2
FAN06G0933 Fragaria x ananassa HOM05D005745 ORTHO05D006857 1.1e-30 137.9 123 63.4
Atru.chr5.475 Acer truncatum HOM05D005745 ORTHO05D006857 1.5e-30 137.5 88 77.3
Zm00001eb442120 Zea mays HOM05D009386 ORTHO05D006857 1.8e-28 130.6 150 44.7
Prupe.2G164500 Prunus persica HOM05D005745 ORTHO05D006857 5.2e-28 129.0 127 57.5
Prupe.2G165000 Prunus persica HOM05D005745 ORTHO05D006857 2.6e-27 126.7 256 36.3
CBR_g12518 Chara braunii HOM05D004914 ORTHO05D006512 3.9e-23 112.8 349 26.1
COL.COLO4_12683 Corchorus olitorius HOM05D000683 ORTHO05D000507 3.3e-22 109.8 135 46.7
SEGI_32349 Sequoiadendron giganteum HOM05D005745 ORTHO05D006857 3.1e-20 103.2 102 48.0
PRCOL_00000230 Prasinoderma coloniale HOM05D005745 ORTHO05D006857 1.6e-16 90.9 168 36.3
Thecc.01G362500 Theobroma cacao HOM05D005745 ORTHO05D006857 2.3e-15 87.0 92 55.4
MCO02G004 Micromonas commoda HOM05D005745 ORTHO05D006857 2.1e-13 80.5 204 31.9
SHI13462 Sapria himalayana HOM05D005745 ORTHO05D006857 1.8e-12 77.4 185 31.9
Cre14.g629283 Chlamydomonas reinhardtii HOM05D005745 ORTHO05D006857 2.1e-08 63.9 51 62.7
MD07G1140100 Malus domestica HOM05D005745 ORTHO05D006857 1.0e-07 61.6 60 48.3
MCO15G493 Micromonas commoda HOM05D005745 ORTHO05D006857 6.6e-07 58.9 68 48.5
ATR0594G209 Amborella trichopoda HOM05D005745 ORTHO05D006857 1.5e-06 57.8 36 75.0


User provided reference genes

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