Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G033866 Phaseolus vulgaris HOM05D006268 ORTHO05D008118 2.4e-187 658.7 333 100.0
VMungo0331G0592 Vigna mungo HOM05D006268 ORTHO05D008118 5.2e-174 614.4 333 92.8
Glyma.03G093200 Glycine max HOM05D006268 ORTHO05D008118 8.3e-164 580.5 333 88.3
Glyma.16G080700 Glycine max HOM05D006268 ORTHO05D008118 6.0e-162 574.3 333 87.1
Lj3g0019214 Lotus japonicus HOM05D006268 ORTHO05D008118 1.4e-150 536.6 335 80.9
Lalb_Chr07g0194551 Lupinus albus HOM05D006268 ORTHO05D008118 1.4e-147 526.6 334 78.1
Ca_23170_v3 Cicer arietinum L. HOM05D006268 ORTHO05D008118 1.0e-145 520.4 335 78.8
Psat4g207400 Pisum sativum HOM05D006268 ORTHO05D008118 8.7e-137 490.7 330 73.9
Cfa010996 Carpinus fangiana HOM05D006268 ORTHO05D008118 4.8e-135 485.0 336 72.9
Haze_02942 Corylus avellana HOM05D006268 ORTHO05D008118 1.5e-133 479.9 336 72.0
FAN06G0712 Fragaria x ananassa HOM05D006268 ORTHO05D008118 9.9e-133 477.2 334 72.8
RcHm_v2.0_Chr1g0341291 Rosa chinensis HOM05D006268 ORTHO05D008118 2.9e-132 475.7 334 72.5
CiPaw.13G019100 Carya illinoinensis HOM05D006268 ORTHO05D008118 8.4e-132 474.2 336 71.7
FAN03G0807 Fragaria x ananassa HOM05D006268 ORTHO05D008118 8.4e-132 474.2 334 72.2
MD00G1098400 Malus domestica HOM05D006268 ORTHO05D008118 8.4e-132 474.2 330 71.8
FvH4_7g08020 Fragaria vesca HOM05D006268 ORTHO05D008118 3.2e-131 472.2 333 72.4
TAR375G0229 Trochodendron aralioides HOM05D006268 ORTHO05D008118 1.2e-130 470.3 335 70.4
CANSAT54G1338 Cannabis sativa HOM05D006268 ORTHO05D008118 2.1e-130 469.5 335 71.3
Potri.002G238300 Populus trichocarpa HOM05D006268 ORTHO05D008118 7.9e-130 467.6 330 70.6
Prupe.2G109200 Prunus persica HOM05D006268 ORTHO05D008118 3.0e-129 465.7 334 68.9
arahy.Tifrunner.gnm1.ann1.EHLP6C Arachis hypogaea HOM05D006268 ORTHO05D008118 2.5e-128 462.6 332 73.8
Medtr8g010550 Medicago truncatula HOM05D006268 ORTHO05D008118 2.5e-128 462.6 334 69.8
CAN.G1551.1 Capsicum annuum HOM05D006268 ORTHO05D008118 4.3e-128 461.8 332 69.6
Nitab4.5_0001209g0060 Nicotiana tabacum HOM05D006268 ORTHO05D008118 4.3e-128 461.8 332 68.7
CSS0005578 Camellia sinensis var. sinensis HOM05D006268 ORTHO05D008118 7.4e-128 461.1 329 69.3
GSVIVG01016051001 Vitis vinifera HOM05D006268 ORTHO05D008118 7.4e-128 461.1 330 69.1
arahy.Tifrunner.gnm1.ann1.V3PJPX Arachis hypogaea HOM05D006268 ORTHO05D008118 1.3e-127 460.3 332 73.5
Eucgr.D01130 Eucalyptus grandis HOM05D006268 ORTHO05D008118 3.7e-127 458.8 336 67.9
MELO3C006233.2 Cucumis melo HOM05D006268 ORTHO05D008118 4.8e-127 458.4 334 68.6
QL04p024264 Quercus lobata HOM05D006268 ORTHO05D008118 8.2e-127 457.6 359 65.2
Actinidia33290 Actinidia chinensis HOM05D006268 ORTHO05D008118 1.8e-126 456.4 335 69.6
Nitab4.5_0001476g0040 Nicotiana tabacum HOM05D006268 ORTHO05D008118 2.4e-126 456.1 332 68.4
PGSC0003DMG400001820 Solanum tuberosum HOM05D006268 ORTHO05D008118 2.4e-126 456.1 332 68.7
DCAR_029548 Daucus carota HOM05D006268 ORTHO05D008118 5.3e-126 454.9 336 67.6
TWI59G0917 Tripterygium wilfordii HOM05D006268 ORTHO05D008118 6.9e-126 454.5 332 68.4
FAN01G0355 Fragaria x ananassa HOM05D006268 ORTHO05D008118 2.6e-125 452.6 378 63.8
CsaV3_3G010120 Cucumis sativus L. HOM05D006268 ORTHO05D008118 3.4e-125 452.2 334 67.7
Solyc01g080940.3 Solanum lycopersicum HOM05D006268 ORTHO05D008118 7.6e-125 451.1 332 69.0
Sed0013667 Sechium edule HOM05D006268 ORTHO05D008118 2.9e-124 449.1 334 66.5
Sabra02G0181600 Salix brachista HOM05D006268 ORTHO05D008118 4.9e-124 448.4 327 68.2
Gohir.A06G169600 Gossypium hirsutum HOM05D006268 ORTHO05D008118 1.4e-123 446.8 334 68.9
PGR083G0810 Punica granatum HOM05D006268 ORTHO05D008118 2.5e-123 446.0 336 67.0
Ciclev10021110m.g Citrus clementina HOM05D006268 ORTHO05D008118 1.2e-122 443.7 329 67.5
Sopen01g032530 Solanum pennellii HOM05D006268 ORTHO05D008118 1.6e-122 443.4 331 68.0
Gorai.N008000 Gossypium raimondii HOM05D006268 ORTHO05D008118 3.5e-122 442.2 332 68.4
Thecc.03G001300 Theobroma cacao HOM05D006268 ORTHO05D008118 4.6e-122 441.8 334 68.6
MSTRG.4977 Avicennia marina HOM05D006268 ORTHO05D008118 1.3e-121 440.3 329 67.5
Cc02_g26120 Coffea canephora HOM05D006268 ORTHO05D008118 6.7e-121 438.0 334 66.2
Nn1g00551 Nelumbo nucifera HOM05D006268 ORTHO05D008118 1.5e-120 436.8 336 65.2
vmacro21105 Vaccinium macrocarpon HOM05D006268 ORTHO05D008118 2.5e-120 436.0 332 65.1
Aqoxy3G02409 Aquilegia oxysepala HOM05D006268 ORTHO05D008118 4.3e-120 435.3 337 66.5
Aqoxy3G02437 Aquilegia oxysepala HOM05D006268 ORTHO05D008118 4.3e-120 435.3 337 66.5
Rhsim01G0145800 Rhododendron simsii HOM05D006268 ORTHO05D008118 4.3e-120 435.3 332 65.1
PSO782G1498 Papaver somniferum HOM05D006268 ORTHO05D008118 7.4e-120 434.5 335 64.2
Sc26g0001930 Simmondsia chinensis HOM05D006268 ORTHO05D008118 1.6e-119 433.3 333 65.2
PSO063G1446 Papaver somniferum HOM05D006268 ORTHO05D008118 1.1e-118 430.6 335 63.6
COL.COLO4_19510 Corchorus olitorius HOM05D006268 ORTHO05D006513 4.1e-118 428.7 332 66.9
Duzib128G0100 Durio zibethinus HOM05D006268 ORTHO05D008118 2.0e-117 426.4 347 64.0
EL10Ac1g00692 Beta vulgaris HOM05D006268 ORTHO05D008118 3.4e-117 425.6 329 63.5
HanXRQChr04g0123661 Helianthus annuus HOM05D006268 ORTHO05D008118 8.5e-116 421.0 334 63.8
CSS0033423 Camellia sinensis var. sinensis HOM05D006268 ORTHO05D008118 1.9e-115 419.9 329 64.7
ClCG05G002670 Citrullus lanatus HOM05D006268 ORTHO05D008118 1.9e-115 419.9 334 64.7
AUR62023342 Chenopodium quinoa HOM05D006268 ORTHO05D008118 2.5e-115 419.5 330 63.0
Ah.06g189690 Amaranthus hybridus HOM05D006268 ORTHO05D008118 2.1e-114 416.4 345 61.7
Lsat_1_v5_gn_7_10860 Lactuca sativa HOM05D006268 ORTHO05D008118 1.0e-113 414.1 327 65.7
TPR.G9770 Trifolium pratense HOM05D006268 ORTHO05D008118 1.0e-113 414.1 329 63.2
Migut.N01815 Erythranthe guttata HOM05D006268 ORTHO05D008118 1.4e-113 413.7 329 62.3
SalBow4G0743 Salvia bowleyana HOM05D006268 ORTHO05D008118 1.4e-113 413.7 330 62.4
Hund26937 Selenicereus undatus HOM05D006268 ORTHO05D008118 3.7e-111 405.6 330 61.5
Atru.BG.53.p Acer truncatum HOM05D006268 ORTHO05D008118 7.7e-109 397.9 321 66.7
BcaB05g22409 Brassica carinata HOM05D006268 ORTHO05D008118 1.4e-105 387.1 333 60.7
C02p13500 Brassica napus HOM05D006268 ORTHO05D008118 8.8e-105 384.4 333 60.1
BolC2t07462H Brassica oleracea HOM05D006268 ORTHO05D008118 8.8e-105 384.4 333 60.1
BcaC03g14111 Brassica carinata HOM05D006268 ORTHO05D008118 2.0e-104 383.3 327 61.2
ATR0049G059 Amborella trichopoda HOM05D006268 ORTHO05D008118 4.4e-104 382.1 341 58.4
BraA02t05859Z Brassica rapa HOM05D006268 ORTHO05D008118 2.8e-103 379.4 327 60.6
HPP92_028001 Vanilla planifolia HOM05D006268 ORTHO05D008118 1.8e-102 376.7 333 56.5
Manes.08G055700 Manihot esculenta HOM05D006268 ORTHO05D008118 2.4e-102 376.3 290 64.8
A02p07860 Brassica napus HOM05D006268 ORTHO05D008118 3.1e-102 375.9 327 60.2
unitig_22.g5778 Utricularia gibba HOM05D006268 ORTHO05D008118 9.1e-102 374.4 328 58.5
CARHR272020 Cardamine hirsuta HOM05D006268 ORTHO05D008118 1.2e-101 374.0 333 58.3
Thhalv10014126m.g Eutrema salsugineum HOM05D006268 ORTHO05D008118 7.7e-101 371.3 333 57.7
Aa31LG11G10 Aethionema arabicum HOM05D006268 ORTHO05D008118 2.9e-100 369.4 330 59.4
SEGI_16160 Sequoiadendron giganteum HOM05D006268 ORTHO05D008118 8.5e-100 367.9 354 55.4
THA.LOC104799599 Tarenaya hassleriana HOM05D006268 ORTHO05D008118 1.9e-99 366.7 336 56.0
AL8G34320 Arabidopsis lyrata HOM05D006268 ORTHO05D008118 1.2e-98 364.0 334 56.9
Os03g0390700 Oryza sativa ssp. japonica HOM05D006268 ORTHO05D008118 1.6e-98 363.6 331 58.3
Zm00001eb392560 Zea mays HOM05D006268 ORTHO05D008118 1.4e-97 360.5 325 58.8
Sp6g19880 Schrenkiella parvula HOM05D006268 ORTHO05D008118 5.2e-97 358.6 325 57.8
Carub.0008s1876 Capsella rubella HOM05D006268 ORTHO05D008118 1.5e-96 357.1 333 57.7
AUR62013813 Chenopodium quinoa HOM05D006268 ORTHO05D008118 1.5e-96 357.1 328 56.4
AT5G58220 Arabidopsis thaliana HOM05D006268 ORTHO05D008118 1.7e-95 353.6 333 56.8
ECA236G2174 Erigeron canadensis HOM05D006268 ORTHO05D008118 5.3e-94 348.6 308 59.1
FAN10G2079 Fragaria x ananassa HOM05D006268 ORTHO05D008118 2.6e-93 346.3 301 63.5
Dinv43994 Davidia involucrata HOM05D006268 ORTHO05D008118 2.0e-88 330.1 243 68.3
CDE04G2879 Ceratophyllum demersum HOM05D006268 ORTHO05D008118 3.1e-78 296.2 275 57.5
SGA_v2.0_scaffold95G28736 Striga asiatica HOM05D006268 ORTHO05D008118 1.6e-77 293.9 243 65.0
SMO367G0371 Selaginella moellendorffii HOM05D006268 ORTHO05D008118 5.9e-77 292.0 364 44.8
Pp3c4_10360 Physcomitrium patens HOM05D006268 ORTHO05D008118 1.7e-76 290.4 338 48.5
Mapoly0090s0043 Marchantia polymorpha HOM05D006268 ORTHO05D008118 6.3e-71 271.9 336 47.3
CBR_g30589 Chara braunii HOM05D006268 ORTHO05D008118 7.8e-61 238.4 468 36.1
Lj7C555G14 Lonicera japonica HOM05D006268 ORTHO05D008118 1.0e-60 238.0 158 73.4
AagrBONN_evm.TU.Sc2ySwM_228.2734 Anthoceros agrestis HOM05D006268 ORTHO05D008118 2.9e-55 219.9 313 41.9
Cre17.g735950 Chlamydomonas reinhardtii HOM05D006268 ORTHO05D008118 1.1e-54 218.0 345 38.6
PRCOL_00004243 Prasinoderma coloniale HOM05D006268 ORTHO05D008118 7.1e-54 215.3 333 39.3
BcaB05g22411 Brassica carinata HOM05D006268 ORTHO05D008118 3.9e-52 209.5 188 58.5
Lj7C555T10 Lonicera japonica HOM05D006268 ORTHO05D008118 1.5e-51 207.6 150 66.0
DCAR_025012 Daucus carota HOM05D006268 ORTHO05D008118 1.6e-45 187.6 170 58.8
Cpa.g.sc74.89 Carica papaya HOM05D006268 ORTHO05D008118 2.1e-37 160.6 183 51.9
SMO197G0011 Selaginella moellendorffii HOM05D006268 ORTHO05D008118 7.8e-37 158.7 147 52.4
SMO367G0431 Selaginella moellendorffii HOM05D006268 ORTHO05D008118 3.0e-36 156.8 174 46.6
SHI28983 Sapria himalayana HOM05D006268 ORTHO05D008118 1.5e-32 144.4 142 50.0
Sc26g0001910 Simmondsia chinensis HOM05D006268 ORTHO05D008118 2.6e-32 143.7 102 63.7
MCO07G440 Micromonas commoda HOM05D006268 ORTHO05D008118 5.4e-30 136.0 160 46.9
BolC9t57859H Brassica oleracea HOM05D006268 ORTHO05D008118 1.4e-25 121.3 81 66.7
Hma1.2p1_0076F.1_g039600 Hydrangea macrophylla HOM05D006268 ORTHO05D008118 6.0e-21 105.9 63 71.4
MCO05G065 Micromonas commoda HOM05D006268 ORTHO05D008118 1.9e-19 100.9 132 43.2
Oeu050272.1 Olea europaea HOM05D006268 ORTHO05D008118 4.3e-19 99.8 71 62.0
MD02G1236900 Malus domestica HOM05D006268 ORTHO05D008118 2.9e-15 87.0 133 44.4
Cfa010995 Carpinus fangiana HOM05D006268 ORTHO05D008118 1.5e-11 74.7 58 69.0
BcaC04g19902 Brassica carinata HOM05D006268 ORTHO05D008118 2.5e-11 73.9 57 56.1
Sabra14G0137200 Salix brachista HOM05D008143 ORTHO05D010256 9.6e-11 72.0 75 52.0
Dinv43550 Davidia involucrata HOM05D006268 ORTHO05D008118 1.1e-09 68.6 43 81.4
Ca_29090_v3 Cicer arietinum L. HOM05D000582 ORTHO05D034183 7.2e-06 55.8 108 31.5
C09p50070 Brassica napus HOM05D006268 ORTHO05D008118 9.3e-06 55.5 81 39.5


User provided reference genes

Program Settings