Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G006200 Phaseolus vulgaris HOM05D007241 ORTHO05D009142 1.3e-185 652.9 334 100.0
VMungo0331G1333 Vigna mungo HOM05D007241 ORTHO05D009142 3.6e-159 565.1 332 87.0
Glyma.01G109100 Glycine max HOM05D007241 ORTHO05D009142 6.0e-138 494.6 344 76.7
Lalb_Chr13g0291331 Lupinus albus HOM05D007241 ORTHO05D009142 2.0e-112 409.8 337 62.9
Lj3g0002129 Lotus japonicus HOM05D007241 ORTHO05D009142 1.3e-111 407.1 351 63.8
Psat7g241800 Pisum sativum HOM05D007241 ORTHO05D009142 1.5e-99 367.1 329 59.6
arahy.Tifrunner.gnm1.ann1.IV4I8P Arachis hypogaea HOM05D007241 ORTHO05D009142 3.2e-99 365.9 294 65.0
CiPaw.10G153200 Carya illinoinensis HOM05D007241 ORTHO05D009142 7.2e-99 364.8 340 56.5
Ca_20114_v3 Cicer arietinum L. HOM05D007241 ORTHO05D009142 1.2e-98 364.0 379 54.4
Haze_20925 Corylus avellana HOM05D007241 ORTHO05D009142 8.8e-97 357.8 336 57.7
Cpa.g.sc56.88 Carica papaya HOM05D007241 ORTHO05D009142 3.1e-94 349.4 331 54.7
Thecc.05G024800 Theobroma cacao HOM05D007241 ORTHO05D009142 9.1e-94 347.8 347 55.3
GSVIVG01034032001 Vitis vinifera HOM05D007241 ORTHO05D009142 3.8e-92 342.4 320 57.8
CSS0004399 Camellia sinensis var. sinensis HOM05D007241 ORTHO05D009142 4.2e-91 339.0 350 53.4
Prupe.6G268100 Prunus persica HOM05D007241 ORTHO05D009142 4.2e-91 339.0 304 55.3
Medtr4g019060 Medicago truncatula HOM05D007241 ORTHO05D009142 5.5e-91 338.6 325 56.0
Duzib093G2007 Durio zibethinus HOM05D007241 ORTHO05D009142 9.4e-91 337.8 335 55.2
arahy.Tifrunner.gnm1.ann1.D4R6TJ Arachis hypogaea HOM05D007241 ORTHO05D009142 2.1e-90 336.7 342 55.6
Eucgr.K03006 Eucalyptus grandis HOM05D007241 ORTHO05D009142 3.6e-90 335.9 291 58.4
PGR004G2498 Punica granatum HOM05D007241 ORTHO05D009142 6.1e-90 335.1 295 59.0
TAR633G0637 Trochodendron aralioides HOM05D007241 ORTHO05D009142 6.1e-90 335.1 319 56.4
Duzib106G0374 Durio zibethinus HOM05D007241 ORTHO05D009142 1.4e-89 334.0 347 53.0
Gorai.012G110300 Gossypium raimondii HOM05D007241 ORTHO05D009142 3.0e-89 332.8 345 54.5
Nitab4.5_0007671g0010 Nicotiana tabacum HOM05D007241 ORTHO05D009142 1.2e-88 330.9 329 54.1
Peaxi162Scf00427g00616 Petunia axillaris HOM05D007241 ORTHO05D009142 1.2e-88 330.9 314 56.7
Gohir.D04G127300 Gossypium hirsutum HOM05D007241 ORTHO05D009142 2.0e-88 330.1 351 53.6
Nn2g11326 Nelumbo nucifera HOM05D007241 ORTHO05D009142 2.6e-88 329.7 337 54.0
Carub.0003s0832 Capsella rubella HOM05D007241 ORTHO05D009142 9.8e-88 327.8 330 51.8
Cc06_g01830 Coffea canephora HOM05D007241 ORTHO05D009142 9.8e-88 327.8 341 54.0
MBI14_g28606_MAGBIO Magnolia biondii HOM05D007241 ORTHO05D009142 1.3e-87 327.4 316 54.7
CAN.G1233.2 Capsicum annuum HOM05D007241 ORTHO05D009142 6.3e-87 325.1 326 53.7
Nitab4.5_0000008g0420 Nicotiana tabacum HOM05D007241 ORTHO05D009142 8.3e-87 324.7 339 52.5
Dinv35525 Davidia involucrata HOM05D007241 ORTHO05D009142 1.1e-86 324.3 326 54.9
AL3G20320 Arabidopsis lyrata HOM05D007241 ORTHO05D009142 1.8e-86 323.6 331 51.1
Solyc09g011830.4 Solanum lycopersicum HOM05D007241 ORTHO05D009142 1.8e-86 323.6 306 55.2
AUR62015997 Chenopodium quinoa HOM05D007241 ORTHO05D009142 4.1e-86 322.4 334 53.3
BcaC09g48056 Brassica carinata HOM05D007241 ORTHO05D009142 5.4e-86 322.0 331 50.8
Sopen09g006650 Solanum pennellii HOM05D007241 ORTHO05D009142 1.2e-85 320.9 337 51.9
PGSC0003DMG400020362 Solanum tuberosum HOM05D007241 ORTHO05D009142 1.6e-85 320.5 313 54.0
MSTRG.5609 Avicennia marina HOM05D007241 ORTHO05D009142 2.0e-85 320.1 319 55.5
CARHR083550 Cardamine hirsuta HOM05D007241 ORTHO05D009142 2.0e-85 320.1 332 50.6
Atru.chr8.2123 Acer truncatum HOM05D007241 ORTHO05D009142 4.5e-85 318.9 309 53.7
FvH4_6g12350 Fragaria vesca HOM05D007241 ORTHO05D009142 4.5e-85 318.9 325 53.8
BcaC09g48011 Brassica carinata HOM05D007241 ORTHO05D009142 7.7e-85 318.2 330 52.1
Sp3g07590 Schrenkiella parvula HOM05D007241 ORTHO05D009142 7.7e-85 318.2 313 53.4
BraA01t04312Z Brassica rapa HOM05D007241 ORTHO05D009142 1.3e-84 317.4 331 50.8
FAN14G0673 Fragaria x ananassa HOM05D007241 ORTHO05D009142 1.7e-84 317.0 321 53.9
Oeu015010.1 Olea europaea HOM05D007241 ORTHO05D009142 2.3e-84 316.6 309 52.8
BolC1t05471H Brassica oleracea HOM05D007241 ORTHO05D009142 2.9e-84 316.2 331 49.8
RcHm_v2.0_Chr3g0464151 Rosa chinensis HOM05D007241 ORTHO05D009142 2.9e-84 316.2 329 51.7
Aqoxy1G00764 Aquilegia oxysepala HOM05D007241 ORTHO05D009142 3.8e-84 315.8 302 55.3
CANSAT35G2041 Cannabis sativa HOM05D007241 ORTHO05D009142 3.8e-84 315.8 337 50.4
FAN05G2185 Fragaria x ananassa HOM05D007241 ORTHO05D009142 3.8e-84 315.8 325 53.2
AT3G09210 Arabidopsis thaliana HOM05D007241 ORTHO05D009142 5.0e-84 315.5 330 49.7
FAN02G0490 Fragaria x ananassa HOM05D007241 ORTHO05D009142 1.5e-83 313.9 326 52.1
Aa31LG3G1690 Aethionema arabicum HOM05D007241 ORTHO05D009142 2.5e-83 313.2 303 52.8
MELO3C003216.2 Cucumis melo HOM05D007241 ORTHO05D009142 4.3e-83 312.4 339 50.7
Sed0022131 Sechium edule HOM05D007241 ORTHO05D009142 5.6e-83 312.0 334 51.8
Hma1.2p1_0671F.1_g200780 Hydrangea macrophylla HOM05D007241 ORTHO05D009142 7.3e-83 311.6 333 51.7
Sabra06G0072600 Salix brachista HOM05D007241 ORTHO05D009142 9.5e-83 311.2 346 49.7
Ciclev10012141m.g Citrus clementina HOM05D007241 ORTHO05D009142 1.6e-82 310.5 310 53.5
Sc22g0004510 Simmondsia chinensis HOM05D007241 ORTHO05D009142 2.1e-82 310.1 323 54.8
Thhalv10021091m.g Eutrema salsugineum HOM05D007241 ORTHO05D009142 4.7e-82 308.9 335 49.3
EL10Ac3g05675 Beta vulgaris HOM05D007241 ORTHO05D009142 1.4e-81 307.4 287 58.2
Potri.006G094800 Populus trichocarpa HOM05D007241 ORTHO05D009142 1.4e-81 307.4 345 48.4
Ah.07g207300 Amaranthus hybridus HOM05D007241 ORTHO05D009142 2.3e-81 306.6 339 52.5
ClCG04G007350 Citrullus lanatus HOM05D007241 ORTHO05D009142 5.2e-81 305.4 348 48.6
SGA_v2.0_scaffold85G26792 Striga asiatica HOM05D007241 ORTHO05D009142 1.5e-80 303.9 342 50.6
Manes.08G083700 Manihot esculenta HOM05D007241 ORTHO05D009142 2.0e-80 303.5 341 49.9
THA.LOC104823276 Tarenaya hassleriana HOM05D007241 ORTHO05D009142 5.7e-80 302.0 339 50.4
CsaV3_4G025900 Cucumis sativus L. HOM05D007241 ORTHO05D009142 7.5e-80 301.6 328 51.2
Migut.J00242 Erythranthe guttata HOM05D007241 ORTHO05D009142 3.7e-79 299.3 308 52.6
Gohir.A04G087000 Gossypium hirsutum HOM05D007241 ORTHO05D009142 3.7e-79 299.3 338 52.1
vmacro20223 Vaccinium macrocarpon HOM05D007241 ORTHO05D009142 8.3e-79 298.1 347 49.3
PSO063G4791 Papaver somniferum HOM05D007241 ORTHO05D009142 2.7e-77 293.1 297 53.5
TWI74G0988 Tripterygium wilfordii HOM05D007241 ORTHO05D009142 7.8e-77 291.6 326 49.1
MD04G1143600 Malus domestica HOM05D007241 ORTHO05D009142 3.3e-75 286.2 315 50.5
SalBow3G1957 Salvia bowleyana HOM05D007241 ORTHO05D009142 1.6e-74 283.9 310 51.3
DCAR_010398 Daucus carota HOM05D007241 ORTHO05D009142 4.7e-74 282.3 357 46.5
Hund04733 Selenicereus undatus HOM05D007241 ORTHO05D009142 3.1e-73 279.6 325 51.7
unitig_749.g14176 Utricularia gibba HOM05D007241 ORTHO05D009142 8.9e-73 278.1 301 50.5
arahy.Tifrunner.gnm1.ann1.4L01Q9 Arachis hypogaea HOM05D007241 ORTHO05D009142 2.0e-72 276.9 207 67.1
Actinidia13799 Actinidia chinensis HOM05D007241 ORTHO05D009142 5.4e-70 268.9 323 47.7
Rhsim05G0202600 Rhododendron simsii HOM05D007241 ORTHO05D009142 1.0e-68 264.6 333 46.2
ATR0618G224 Amborella trichopoda HOM05D007241 ORTHO05D009142 1.7e-68 263.8 311 45.3
Lsat_1_v5_gn_2_72881 Lactuca sativa HOM05D007241 ORTHO05D009142 1.6e-66 257.3 308 45.8
HanXRQChr10g0300011 Helianthus annuus HOM05D007241 ORTHO05D009142 5.2e-65 252.3 324 42.9
ECA233G2042 Erigeron canadensis HOM05D007241 ORTHO05D009142 1.2e-64 251.1 286 47.2
TPR.G8187 Trifolium pratense HOM05D007241 ORTHO05D009142 1.1e-62 244.6 336 46.7
Os03g0825500 Oryza sativa ssp. japonica HOM05D007241 ORTHO05D009142 3.2e-62 243.0 312 43.3
HPP92_014289 Vanilla planifolia HOM05D007241 ORTHO05D009142 1.8e-57 227.3 250 45.2
Zm00001eb063100 Zea mays HOM05D007241 ORTHO05D009142 1.4e-54 217.6 296 41.6
CDE04G1578 Ceratophyllum demersum HOM05D007241 ORTHO05D009142 1.7e-52 210.7 221 50.2
AUR62021204 Chenopodium quinoa HOM05D007241 ORTHO05D009142 1.2e-48 198.0 334 41.9
TPR.G40038 Trifolium pratense HOM05D007241 ORTHO05D009142 1.7e-31 141.0 96 64.6
Mapoly0003s0142 Marchantia polymorpha HOM05D007241 ORTHO05D009142 3.9e-28 129.8 320 28.8
Lj3A958T74 Lonicera japonica HOM05D007241 ORTHO05D009142 9.0e-25 118.6 165 45.5
COL.COLO4_14646 Corchorus olitorius HOM05D007241 ORTHO05D009142 3.8e-23 113.2 105 55.2
MD12G1157800 Malus domestica HOM05D007241 ORTHO05D009142 4.9e-23 112.8 228 34.6
Pp3c24_19950 Physcomitrium patens HOM05D007241 ORTHO05D009142 2.5e-22 110.5 312 25.3
COL.COLO4_14645 Corchorus olitorius HOM05D007241 ORTHO05D009142 1.0e-20 105.1 134 49.3
Lj3A958T75 Lonicera japonica HOM05D007241 ORTHO05D009142 6.3e-18 95.9 99 51.5
BcaB05g24622 Brassica carinata HOM05D007241 ORTHO05D009142 4.2e-14 83.2 101 46.5
CBR_g25746 Chara braunii HOM05D000019 ORTHO05D000048 9.3e-14 82.0 318 22.3
SEGI_13087 Sequoiadendron giganteum HOM05D007241 ORTHO05D009142 2.3e-12 77.4 76 46.1
TAR629G1375 Trochodendron aralioides HOM05D007241 ORTHO05D009142 1.3e-07 61.6 64 51.6
SMO164G0023 Selaginella moellendorffii HOM05D007241 ORTHO05D009142 1.4e-06 58.2 329 21.0


User provided reference genes

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