Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G100600 Phaseolus vulgaris HOM05D005642 ORTHO05D006672 0.0e+00 1131.3 610 100.0
VMungo1309G0073 Vigna mungo HOM05D005642 ORTHO05D006672 1.3e-271 939.5 611 86.4
Glyma.06G075900 Glycine max HOM05D005642 ORTHO05D006672 3.4e-248 861.7 617 78.9
Glyma.04G074900 Glycine max HOM05D005642 ORTHO05D006672 1.5e-203 713.4 483 80.1
Ca_15671_v3 Cicer arietinum L. HOM05D005642 ORTHO05D006672 5.6e-190 668.3 632 64.1
Medtr3g108780 Medicago truncatula HOM05D005642 ORTHO05D006672 4.0e-180 635.6 628 62.6
Lj1g0005947 Lotus japonicus HOM05D005642 ORTHO05D006672 4.1e-177 625.5 623 61.6
Psat5g024120 Pisum sativum HOM05D005642 ORTHO05D006672 1.9e-174 616.7 623 61.5
Lalb_Chr11g0064111 Lupinus albus HOM05D005642 ORTHO05D006672 4.6e-168 595.5 623 57.3
arahy.Tifrunner.gnm1.ann1.4FD105 Arachis hypogaea HOM05D005642 ORTHO05D006672 4.6e-160 568.9 618 56.6
arahy.Tifrunner.gnm1.ann1.KDL0BF Arachis hypogaea HOM05D005642 ORTHO05D006672 2.6e-155 553.1 645 55.2
Lalb_Chr23g0269061 Lupinus albus HOM05D005642 ORTHO05D006672 6.4e-154 548.5 624 53.8
Ciclev10007752m.g Citrus clementina HOM05D005642 ORTHO05D006672 1.7e-82 311.2 627 41.5
Duzib168G1720 Durio zibethinus HOM05D005642 ORTHO05D006672 8.6e-82 308.9 647 40.3
Prupe.1G460900 Prunus persica HOM05D005642 ORTHO05D006672 1.1e-81 308.5 671 40.7
QL12p025051 Quercus lobata HOM05D005642 ORTHO05D006672 4.0e-79 300.1 631 39.9
Gorai.001G001600 Gossypium raimondii HOM05D005642 ORTHO05D006672 2.0e-78 297.7 626 37.1
COL.COLO4_19042 Corchorus olitorius HOM05D005642 ORTHO05D006672 4.4e-78 296.6 675 37.0
Gohir.D07G001900 Gossypium hirsutum HOM05D005642 ORTHO05D006672 1.7e-77 294.7 628 36.9
CiPaw.07G213400 Carya illinoinensis HOM05D005642 ORTHO05D006672 2.9e-77 293.9 636 40.1
Cfa013263 Carpinus fangiana HOM05D005642 ORTHO05D006672 1.4e-76 291.6 526 41.8
Gohir.A07G001500 Gossypium hirsutum HOM05D005642 ORTHO05D006672 4.6e-75 286.6 625 37.3
Potri.006G275200 Populus trichocarpa HOM05D005642 ORTHO05D006672 4.3e-73 280.0 646 39.8
Thecc.09G006400 Theobroma cacao HOM05D005642 ORTHO05D006672 9.5e-73 278.9 485 43.5
MD15G1108600 Malus domestica HOM05D005642 ORTHO05D006672 2.8e-72 277.3 649 38.4
Hma1.2p1_0379F.1_g139820 Hydrangea macrophylla HOM05D005642 ORTHO05D006672 9.2e-68 262.3 618 36.4
GSVIVG01035528001 Vitis vinifera HOM05D005642 ORTHO05D006672 2.1e-67 261.2 539 41.6
Manes.03G003300 Manihot esculenta HOM05D005642 ORTHO05D006672 3.5e-67 260.4 618 37.5
FvH4_2g36900 Fragaria vesca HOM05D005642 ORTHO05D006672 6.0e-67 259.6 631 38.4
Dinv03494 Davidia involucrata HOM05D005642 ORTHO05D006672 1.3e-66 258.5 631 37.7
Potri.018G006200 Populus trichocarpa HOM05D005642 ORTHO05D006672 3.9e-66 256.9 635 36.5
FAN27G2209 Fragaria x ananassa HOM05D005642 ORTHO05D006672 1.1e-65 255.4 629 33.4
Haze_21725 Corylus avellana HOM05D005642 ORTHO05D006672 4.3e-65 253.4 500 41.2
FAN15G2732 Fragaria x ananassa HOM05D005642 ORTHO05D006672 2.1e-64 251.1 512 41.6
Actinidia06420 Actinidia chinensis HOM05D005642 ORTHO05D006672 1.2e-62 245.4 643 36.9
FAN20G1085 Fragaria x ananassa HOM05D005642 ORTHO05D006672 9.9e-62 242.3 610 37.7
Sabra18G0014300 Salix brachista HOM05D005642 ORTHO05D006672 1.3e-61 241.9 631 34.9
TWI32G0776 Tripterygium wilfordii HOM05D005642 ORTHO05D006672 1.3e-61 241.9 630 36.5
CSS0029793 Camellia sinensis var. sinensis HOM05D005642 ORTHO05D006672 4.9e-61 240.0 635 37.6
PGR044G2675 Punica granatum HOM05D005642 ORTHO05D006672 1.9e-60 238.0 637 38.3
THA.LOC104803598 Tarenaya hassleriana HOM05D005642 ORTHO05D006672 2.1e-59 234.6 641 34.9
CANSAT78G0024 Cannabis sativa HOM05D005642 ORTHO05D006672 4.6e-59 233.4 367 43.1
TAR383G0661 Trochodendron aralioides HOM05D005642 ORTHO05D006672 1.0e-58 232.3 709 35.1
CsaV3_3G047060 Cucumis sativus L. HOM05D005642 ORTHO05D006672 1.7e-58 231.5 633 35.7
RcHm_v2.0_Chr6g0304881 Rosa chinensis HOM05D005642 ORTHO05D006672 2.3e-58 231.1 634 36.6
TWI63G0215 Tripterygium wilfordii HOM05D005642 ORTHO05D006672 2.3e-58 231.1 623 35.3
Sabra06G0213000 Salix brachista HOM05D005642 ORTHO05D006672 8.6e-58 229.2 696 32.5
Gohir.D05G067500 Gossypium hirsutum HOM05D005642 ORTHO05D006672 2.1e-56 224.6 589 34.5
Gorai.009G068300 Gossypium raimondii HOM05D005642 ORTHO05D006672 2.1e-56 224.6 586 35.0
ClCG05G017540 Citrullus lanatus HOM05D005642 ORTHO05D006672 2.8e-56 224.2 632 37.0
Gohir.A05G064900 Gossypium hirsutum HOM05D005642 ORTHO05D006672 1.8e-55 221.5 588 34.5
Hma1.2p1_0379F.1_g139825 Hydrangea macrophylla HOM05D005642 ORTHO05D006672 3.1e-55 220.7 491 35.8
MD08G1130500 Malus domestica HOM05D005642 ORTHO05D006672 6.8e-55 219.5 489 35.0
DCAR_004570 Daucus carota HOM05D005642 ORTHO05D006672 1.7e-53 214.9 629 34.2
Atru.chr7.2633 Acer truncatum HOM05D005642 ORTHO05D006672 2.2e-53 214.5 457 37.6
MSTRG.25774 Avicennia marina HOM05D005642 ORTHO05D006672 2.2e-53 214.5 630 32.7
ECA246G0678 Erigeron canadensis HOM05D005642 ORTHO05D006672 3.9e-50 203.8 438 39.0
Nn8g40457 Nelumbo nucifera HOM05D005642 ORTHO05D006672 2.5e-49 201.1 634 34.4
Sed0007069 Sechium edule HOM05D005642 ORTHO05D006672 9.6e-49 199.1 327 47.7
HanXRQChr17g0538601 Helianthus annuus HOM05D005642 ORTHO05D006672 2.8e-48 197.6 392 40.1
Eucgr.C04006 Eucalyptus grandis HOM05D005642 ORTHO05D006672 8.1e-48 196.1 596 35.2
Cc11_g04340 Coffea canephora HOM05D005642 ORTHO05D006672 1.8e-47 194.9 631 34.1
CAN.G673.14 Capsicum annuum HOM05D005642 ORTHO05D006672 2.6e-46 191.0 588 33.8
Peaxi162Scf00045g01740 Petunia axillaris HOM05D005642 ORTHO05D006672 2.2e-45 188.0 609 30.4
Migut.A00441 Erythranthe guttata HOM05D005642 ORTHO05D006672 4.9e-45 186.8 555 34.2
SalBow8G4661 Salvia bowleyana HOM05D005642 ORTHO05D006672 8.4e-45 186.0 624 32.5
CARHR239310 Cardamine hirsuta HOM05D005642 ORTHO05D006672 1.9e-44 184.9 319 44.5
Sp7g29290 Schrenkiella parvula HOM05D005642 ORTHO05D006672 1.9e-44 184.9 515 33.6
Solyc08g006480.3 Solanum lycopersicum HOM05D005642 ORTHO05D006672 1.6e-43 181.8 558 34.1
Carub.0007s0913 Capsella rubella HOM05D005642 ORTHO05D006672 2.1e-43 181.4 320 44.1
Thhalv10024763m.g Eutrema salsugineum HOM05D005642 ORTHO05D006672 4.6e-43 180.3 522 35.1
Aa31LG2G18900 Aethionema arabicum HOM05D005642 ORTHO05D006672 6.0e-43 179.9 548 34.1
Sopen08g002430 Solanum pennellii HOM05D005642 ORTHO05D006672 1.3e-42 178.7 558 33.9
AT4G31430 Arabidopsis thaliana HOM05D005642 ORTHO05D006672 3.0e-42 177.6 316 43.4
Oeu019279.2 Olea europaea HOM05D005642 ORTHO05D006672 3.0e-42 177.6 502 32.7
BcaC01g01089 Brassica carinata HOM05D005642 ORTHO05D006672 5.1e-42 176.8 327 41.6
C03p87980 Brassica napus HOM05D005642 ORTHO05D006672 5.1e-42 176.8 327 41.6
Migut.E01422 Erythranthe guttata HOM05D005642 ORTHO05D006672 8.7e-42 176.0 351 41.3
BraA08t33825Z Brassica rapa HOM05D005642 ORTHO05D006672 1.1e-41 175.6 336 39.0
AL7G20630 Arabidopsis lyrata HOM05D005642 ORTHO05D006672 2.5e-41 174.5 326 44.2
BraA01t00636Z Brassica rapa HOM05D005642 ORTHO05D006672 2.5e-41 174.5 322 41.9
Lsat_1_v5_gn_3_25461 Lactuca sativa HOM05D005642 ORTHO05D006672 3.3e-41 174.1 328 42.7
BolC3t21109H Brassica oleracea HOM05D005642 ORTHO05D006672 7.4e-41 172.9 329 40.7
A08p18620 Brassica napus HOM05D005642 ORTHO05D006672 9.6e-41 172.6 335 38.5
BolC1t00742H Brassica oleracea HOM05D005642 ORTHO05D006672 2.1e-40 171.4 337 40.1
vmacro00200 Vaccinium macrocarpon HOM05D005642 ORTHO05D006672 3.6e-40 170.6 805 27.2
A01p06850 Brassica napus HOM05D005642 ORTHO05D006672 4.8e-40 170.2 540 32.8
BcaNung04578 Brassica carinata HOM05D005642 ORTHO05D006672 8.1e-40 169.5 461 34.7
AUR62020612 Chenopodium quinoa HOM05D005642 ORTHO05D006672 2.4e-39 167.9 357 44.3
MELO3C003630.2 Cucumis melo HOM05D005642 ORTHO05D006672 4.0e-39 167.2 315 43.8
MBI14_g08146_MAGBIO Magnolia biondii HOM05D005642 ORTHO05D006672 1.2e-38 165.6 412 33.5
Hund03285 Selenicereus undatus HOM05D005642 ORTHO05D006672 1.2e-38 165.6 529 33.6
MBI16_g31790_MAGBIO Magnolia biondii HOM05D005642 ORTHO05D006672 4.5e-38 163.7 616 30.0
SGA_v2.0_scaffold27G11668 Striga asiatica HOM05D005642 ORTHO05D006672 5.8e-38 163.3 612 33.0
BcaNung04589 Brassica carinata HOM05D005642 ORTHO05D006672 8.4e-37 159.5 503 34.0
BcaC09g51922 Brassica carinata HOM05D005642 ORTHO05D006672 1.1e-36 159.1 540 33.7
C01p07620 Brassica napus HOM05D005642 ORTHO05D006672 1.1e-36 159.1 540 33.7
BcaB03g12695 Brassica carinata HOM05D005642 ORTHO05D006672 2.4e-36 157.9 627 29.3
Hund19402 Selenicereus undatus HOM05D005642 ORTHO05D006672 9.3e-36 156.0 354 36.4
Ah.11g043760 Amaranthus hybridus HOM05D005642 ORTHO05D006672 6.0e-35 153.3 423 33.1
EL10Ac2g03740 Beta vulgaris HOM05D005642 ORTHO05D006672 1.1e-33 149.1 632 31.3
CDE05G2573 Ceratophyllum demersum HOM05D006228 ORTHO05D007847 1.9e-33 148.3 609 31.0
Aqoxy7G02962 Aquilegia oxysepala HOM05D005642 ORTHO05D006672 2.1e-32 144.8 627 31.4
SHI21128 Sapria himalayana HOM05D005642 ORTHO05D006672 4.0e-31 140.6 176 46.0
AUR62009051 Chenopodium quinoa HOM05D005642 ORTHO05D006672 2.6e-30 137.9 287 38.7
arahy.Tifrunner.gnm1.ann1.GW4HJP Arachis hypogaea HOM05D000013 ORTHO05D021469 5.8e-30 136.7 173 45.1
Sc23g0006020 Simmondsia chinensis HOM05D005642 ORTHO05D006672 5.8e-30 136.7 406 30.3
Cpa.g.sc23.5 Carica papaya HOM05D005642 ORTHO05D006672 1.4e-28 132.1 320 35.6
Oeu048000.1 Olea europaea HOM05D005642 ORTHO05D006672 1.4e-28 132.1 382 34.8
SalBow4G3316 Salvia bowleyana HOM05D005642 ORTHO05D006672 5.5e-28 130.2 660 28.6
PSO170G3270 Papaver somniferum HOM05D005642 ORTHO05D006672 7.1e-28 129.8 636 30.8
Nitab4.5_0004131g0010 Nicotiana tabacum HOM05D005642 ORTHO05D006672 9.3e-28 129.4 581 29.9
PSO063G4833 Papaver somniferum HOM05D005642 ORTHO05D006672 3.5e-27 127.5 644 32.3
Oeu014127.1 Olea europaea HOM05D005642 ORTHO05D006672 6.7e-26 123.2 373 34.3
Nitab4.5_0000555g0260 Nicotiana tabacum HOM05D005642 ORTHO05D006672 8.7e-26 122.9 216 43.5
Lsat_1_v5_gn_5_61101 Lactuca sativa HOM05D005642 ORTHO05D006672 4.8e-24 117.1 318 34.9
CDE07G1180 Ceratophyllum demersum HOM05D005642 ORTHO05D006672 2.4e-23 114.8 526 26.2
arahy.Tifrunner.gnm1.ann1.T032QQ Arachis hypogaea HOM05D005642 ORTHO05D010845 4.2e-20 104.0 89 59.6
Os04g0655600 Oryza sativa ssp. japonica HOM05D005642 ORTHO05D006672 1.2e-19 102.4 224 35.3
Atru.chr7.2632 Acer truncatum HOM05D005642 ORTHO05D006672 6.1e-19 100.1 153 55.6
Zm00001eb432470 Zea mays HOM05D005642 ORTHO05D006672 7.9e-19 99.8 472 27.8
Rhsim09G0061700 Rhododendron simsii HOM05D005642 ORTHO05D006672 1.8e-18 98.6 481 26.4
ECA240G1730 Erigeron canadensis HOM05D000542 ORTHO05D006672 2.3e-18 98.2 367 26.2
BraA03t15110Z Brassica rapa HOM05D005642 ORTHO05D006672 6.7e-18 96.7 200 40.5
HanXRQChr13g0412371 Helianthus annuus HOM05D005642 ORTHO05D006672 1.1e-17 95.9 208 37.0
Zm00001eb067810 Zea mays HOM05D005642 ORTHO05D006672 6.3e-16 90.1 179 35.8
HanXRQChr03g0082481 Helianthus annuus HOM05D005642 ORTHO05D006672 1.1e-15 89.4 208 38.9
HPP92_015370 Vanilla planifolia HOM05D005642 ORTHO05D006672 1.4e-15 89.0 607 23.4
HPP92_018374 Vanilla planifolia HOM05D005642 ORTHO05D006672 1.7e-13 82.0 332 28.3
SEGI_30019 Sequoiadendron giganteum HOM05D003044 ORTHO05D006672 8.5e-13 79.7 264 39.8
DCAR_000668 Daucus carota HOM05D005642 ORTHO05D006672 1.9e-12 78.6 544 24.1
ATR0697G055 Amborella trichopoda HOM05D003044 ORTHO05D001869 3.2e-12 77.8 260 30.4
unitig_0.g2821 Utricularia gibba HOM05D005642 ORTHO05D006672 2.1e-11 75.1 167 37.1
MD00G1205700 Malus domestica HOM05D005642 ORTHO05D006672 3.6e-11 74.3 67 64.2
Actinidia21975 Actinidia chinensis HOM05D006756 ORTHO05D001869 5.1e-10 70.5 253 28.9
MBI11_g01313_MAGBIO Magnolia biondii HOM05D003044 ORTHO05D001869 5.1e-10 70.5 244 27.9
unitig_747.g21903 Utricularia gibba HOM05D005642 ORTHO05D006672 1.1e-09 69.3 432 25.7
Lalb_Chr19g0128991 Lupinus albus HOM05D003044 ORTHO05D001869 3.3e-09 67.8 242 29.3
SGA_v2.0_scaffold13G06427 Striga asiatica HOM05D003044 ORTHO05D001869 1.3e-08 65.9 298 26.5
CDE07G1072 Ceratophyllum demersum HOM05D003044 ORTHO05D001869 1.7e-08 65.5 261 28.7
Solyc11g006390.2 Solanum lycopersicum HOM05D003044 ORTHO05D001869 2.8e-08 64.7 302 30.8
Sopen11g002290 Solanum pennellii HOM05D003044 ORTHO05D001869 2.8e-08 64.7 302 30.8
MD02G1257800 Malus domestica HOM05D003044 ORTHO05D001869 1.4e-07 62.4 312 26.3
DCAR_018987 Daucus carota HOM05D003044 ORTHO05D001869 1.8e-07 62.0 273 27.8
CAN.G143.56 Capsicum annuum HOM05D003044 ORTHO05D001869 2.4e-07 61.6 272 28.3
Peaxi162Scf00519g00028 Petunia axillaris HOM05D003044 ORTHO05D001869 2.4e-07 61.6 268 26.1
Nitab4.5_0000687g0150 Nicotiana tabacum HOM05D003044 ORTHO05D001869 3.1e-07 61.2 277 29.6
RcHm_v2.0_Chr1g0332241 Rosa chinensis HOM05D003044 ORTHO05D001869 5.3e-07 60.5 284 31.0
Potri.010G244700 Populus trichocarpa HOM05D003044 ORTHO05D001869 6.9e-07 60.1 268 28.0
Haze_03430 Corylus avellana HOM05D003044 ORTHO05D001869 1.2e-06 59.3 265 28.7
VMungo1309G0147 Vigna mungo HOM05D006756 ORTHO05D001869 1.5e-06 58.9 267 27.3
Dinv36508 Davidia involucrata HOM05D006756 ORTHO05D001869 2.0e-06 58.5 243 26.7
Dinv03806 Davidia involucrata HOM05D003044 ORTHO05D001869 2.6e-06 58.2 284 28.9
TWI15G1087 Tripterygium wilfordii HOM05D003044 ORTHO05D001869 2.6e-06 58.2 251 27.1
Peaxi162Scf00046g00819 Petunia axillaris HOM05D006756 ORTHO05D001869 3.4e-06 57.8 267 27.0
Sopen05g033570 Solanum pennellii HOM05D003044 ORTHO05D001869 3.4e-06 57.8 188 36.7
Nitab4.5_0005247g0010 Nicotiana tabacum HOM05D003044 ORTHO05D001869 5.9e-06 57.0 276 29.3
SGA_v2.0_scaffold121G33034 Striga asiatica HOM05D005642 ORTHO05D006672 5.9e-06 57.0 211 26.1
MD07G1063100 Malus domestica HOM05D003044 ORTHO05D001869 7.7e-06 56.6 265 27.2


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