Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G014700 Phaseolus vulgaris HOM05D005790 ORTHO05D007464 3.3e-228 794.7 386 100.0
VMungo1309G1814 Vigna mungo HOM05D005790 ORTHO05D007464 1.9e-207 725.7 386 91.5
Glyma.06G026400 Glycine max HOM05D005790 ORTHO05D007464 1.5e-196 689.5 386 86.5
Lj1g0012079 Lotus japonicus HOM05D005790 ORTHO05D007464 8.7e-181 637.1 386 79.8
Ca_02056_v3 Cicer arietinum L. HOM05D005790 ORTHO05D007464 1.4e-170 603.2 384 76.0
Lalb_Chr08g0246071 Lupinus albus HOM05D005790 ORTHO05D007464 1.2e-166 590.1 388 75.5
Medtr3g113190 Medicago truncatula HOM05D005790 ORTHO05D007464 2.7e-166 589.0 384 74.5
arahy.Tifrunner.gnm1.ann1.BXK9RQ Arachis hypogaea HOM05D005790 ORTHO05D007464 1.0e-157 560.5 382 74.3
arahy.Tifrunner.gnm1.ann1.S6ZM1I Arachis hypogaea HOM05D005790 ORTHO05D007464 1.0e-157 560.5 382 74.6
Dinv31817 Davidia involucrata HOM05D005790 ORTHO05D007464 9.4e-151 537.3 387 65.9
Cfa013914 Carpinus fangiana HOM05D005790 ORTHO05D007464 1.4e-149 533.5 387 66.4
MELO3C024652.2 Cucumis melo HOM05D005790 ORTHO05D007464 9.7e-148 527.3 386 64.5
Actinidia37976 Actinidia chinensis HOM05D005790 ORTHO05D007464 1.8e-146 523.1 387 66.7
CsaV3_1G045470 Cucumis sativus L. HOM05D005790 ORTHO05D007464 1.8e-146 523.1 386 64.2
CSS0050056 Camellia sinensis var. sinensis HOM05D005790 ORTHO05D007464 2.4e-146 522.7 386 65.3
Gohir.A06G005800 Gossypium hirsutum HOM05D005790 ORTHO05D007464 2.4e-146 522.7 384 66.1
CANSAT01G0079 Cannabis sativa HOM05D005790 ORTHO05D007464 5.3e-146 521.5 385 67.0
CiPaw.07G153400 Carya illinoinensis HOM05D005790 ORTHO05D007464 7.0e-146 521.2 389 66.6
COL.COLO4_26188 Corchorus olitorius HOM05D005790 ORTHO05D007464 7.0e-146 521.2 391 65.5
Manes.13G125500 Manihot esculenta HOM05D005790 ORTHO05D007464 1.2e-145 520.4 394 64.7
GSVIVG01009836001 Vitis vinifera HOM05D005790 ORTHO05D007464 1.6e-145 520.0 386 63.7
Prupe.1G369900 Prunus persica HOM05D005790 ORTHO05D007464 7.7e-145 517.7 387 64.9
ClCG05G018560 Citrullus lanatus HOM05D005790 ORTHO05D007464 2.2e-144 516.2 413 61.0
RcHm_v2.0_Chr6g0272131 Rosa chinensis HOM05D005790 ORTHO05D007464 3.8e-144 515.4 388 64.7
Gorai.010G006000 Gossypium raimondii HOM05D005790 ORTHO05D007464 8.5e-144 514.2 384 64.8
Gohir.D06G001600 Gossypium hirsutum HOM05D005790 ORTHO05D007464 1.5e-143 513.5 384 64.8
FvH4_2g39120 Fragaria vesca HOM05D005790 ORTHO05D007464 3.6e-142 508.8 387 63.8
Sed0009865 Sechium edule HOM05D005790 ORTHO05D007464 6.1e-142 508.1 389 63.2
MD15G1016100 Malus domestica HOM05D005790 ORTHO05D007464 1.4e-141 506.9 387 64.1
TWI36G0257 Tripterygium wilfordii HOM05D005790 ORTHO05D007464 1.8e-141 506.5 402 61.9
TAR381G1687 Trochodendron aralioides HOM05D005790 ORTHO05D007464 2.6e-140 502.7 405 61.2
Potri.009G002100 Populus trichocarpa HOM05D005790 ORTHO05D007464 2.8e-139 499.2 386 63.0
PSO675G3524 Papaver somniferum HOM05D005790 ORTHO05D007464 3.7e-139 498.8 390 61.0
CARHR237760 Cardamine hirsuta HOM05D005790 ORTHO05D007464 1.1e-138 497.3 387 61.8
Ciclev10008674m.g Citrus clementina HOM05D005790 ORTHO05D007464 1.1e-138 497.3 386 62.7
MD08G1017100 Malus domestica HOM05D005790 ORTHO05D007464 1.4e-138 496.9 411 60.1
FAN20G0385 Fragaria x ananassa HOM05D005790 ORTHO05D007464 2.4e-138 496.1 394 61.7
PGR031G1208 Punica granatum HOM05D005790 ORTHO05D007464 3.1e-138 495.7 390 61.0
PGSC0003DMG400016117 Solanum tuberosum HOM05D005790 ORTHO05D007464 4.1e-138 495.4 385 63.1
QL02p010842 Quercus lobata HOM05D005790 ORTHO05D007464 1.3e-136 490.3 454 56.4
Sopen11g005650 Solanum pennellii HOM05D005790 ORTHO05D007464 1.3e-136 490.3 385 62.9
Sp7g27670 Schrenkiella parvula HOM05D005790 ORTHO05D007464 2.9e-136 489.2 387 62.0
Thhalv10025433m.g Eutrema salsugineum HOM05D005790 ORTHO05D007464 3.8e-136 488.8 386 60.1
Solyc11g010910.3 Solanum lycopersicum HOM05D005790 ORTHO05D007464 3.8e-136 488.8 385 62.6
AL7G22390 Arabidopsis lyrata HOM05D005790 ORTHO05D007464 6.5e-136 488.0 389 60.9
BraA01t00778Z Brassica rapa HOM05D005790 ORTHO05D007464 1.1e-135 487.3 395 61.3
Cc10_g02010 Coffea canephora HOM05D005790 ORTHO05D007464 1.5e-135 486.9 385 61.8
DCAR_017500 Daucus carota HOM05D005790 ORTHO05D007464 3.2e-135 485.7 385 61.3
PSO541G0736 Papaver somniferum HOM05D005790 ORTHO05D007464 7.2e-135 484.6 387 60.7
vmacro21704 Vaccinium macrocarpon HOM05D005790 ORTHO05D007464 1.2e-134 483.8 400 59.5
AT4G29860 Arabidopsis thaliana HOM05D005790 ORTHO05D007464 1.6e-134 483.4 390 61.0
FAN15G2431 Fragaria x ananassa HOM05D005790 ORTHO05D007464 1.6e-134 483.4 424 56.8
C01p09340 Brassica napus HOM05D005790 ORTHO05D007464 8.0e-134 481.1 392 61.0
BolC1t00922H Brassica oleracea HOM05D005790 ORTHO05D007464 8.0e-134 481.1 392 61.0
ECA247G0379 Erigeron canadensis HOM05D005790 ORTHO05D007464 8.0e-134 481.1 385 58.7
Carub.0004s1477 Capsella rubella HOM05D005790 ORTHO05D007464 1.0e-133 480.7 388 59.8
FAN20G1847 Fragaria x ananassa HOM05D005790 ORTHO05D007464 1.0e-133 480.7 423 57.4
A01p08300 Brassica napus HOM05D005790 ORTHO05D007464 1.4e-133 480.3 385 61.3
Rhsim06G0026000 Rhododendron simsii HOM05D005790 ORTHO05D007464 7.5e-132 474.6 470 51.9
MSTRG.18414 Avicennia marina HOM05D005790 ORTHO05D007464 1.7e-131 473.4 384 60.7
Eucgr.J01034 Eucalyptus grandis HOM05D005790 ORTHO05D007464 6.3e-131 471.5 386 60.6
Aqoxy2G03135 Aquilegia oxysepala HOM05D005790 ORTHO05D007464 1.4e-130 470.3 381 58.8
CSS0048998 Camellia sinensis var. sinensis HOM05D005790 ORTHO05D007464 2.4e-130 469.5 355 63.9
Duzib093G0196 Durio zibethinus HOM05D005790 ORTHO05D007464 1.2e-129 467.2 355 65.4
Lsat_1_v5_gn_1_16241 Lactuca sativa HOM05D005790 ORTHO05D007464 1.6e-129 466.8 387 57.6
AUR62014415 Chenopodium quinoa HOM05D005790 ORTHO05D007464 7.7e-129 464.5 409 56.7
AUR62019151 Chenopodium quinoa HOM05D005790 ORTHO05D007464 1.3e-128 463.8 390 57.2
Sc02g0005160 Simmondsia chinensis HOM05D005790 ORTHO05D007464 5.0e-128 461.8 384 58.3
EL10Ac1g00445 Beta vulgaris HOM05D005790 ORTHO05D007464 3.2e-127 459.1 384 57.8
ATR0945G002 Amborella trichopoda HOM05D005790 ORTHO05D007464 2.8e-126 456.1 403 57.8
Peaxi162Scf00085g00528 Petunia axillaris HOM05D005790 ORTHO05D007464 6.1e-126 454.9 385 58.2
Haze_22599 Corylus avellana HOM05D005790 ORTHO05D007464 1.0e-125 454.1 497 49.7
Zm00001eb378230 Zea mays HOM05D005790 ORTHO05D007464 2.6e-124 449.5 396 55.8
Thecc.08G038500 Theobroma cacao HOM05D005790 ORTHO05D007464 1.1e-122 444.1 389 59.4
THA.LOC104811397 Tarenaya hassleriana HOM05D005790 ORTHO05D007464 7.0e-122 441.4 404 54.7
SGA_v2.0_scaffold8G04609 Striga asiatica HOM05D005790 ORTHO05D007464 4.5e-121 438.7 384 55.7
Migut.D00577 Erythranthe guttata HOM05D005790 ORTHO05D007464 5.9e-121 438.3 384 56.2
HanXRQChr02g0043921 Helianthus annuus HOM05D005790 ORTHO05D007464 2.1e-118 429.9 368 57.6
SHI02412 Sapria himalayana HOM05D005790 ORTHO05D007464 2.1e-118 429.9 389 55.5
unitig_26.g10135 Utricularia gibba HOM05D005790 ORTHO05D007464 6.8e-117 424.9 383 52.2
Nn5g29250 Nelumbo nucifera HOM05D005790 ORTHO05D007464 4.4e-116 422.2 369 55.6
Atru.BG.234.p Acer truncatum HOM05D005790 ORTHO05D007464 1.0e-112 411.0 383 56.1
CsaV3_UNG233270 Cucumis sativus L. HOM05D005790 ORTHO05D007464 3.0e-112 409.5 378 55.3
Os06g0131100 Oryza sativa ssp. japonica HOM05D005790 ORTHO05D007464 6.6e-112 408.3 385 53.2
Lj4A790T66 Lonicera japonica HOM05D005790 ORTHO05D007464 9.8e-108 394.4 340 58.5
Sabra09G0000400 Salix brachista HOM05D005790 ORTHO05D007464 3.2e-98 362.8 499 42.5
FAN27G0896 Fragaria x ananassa HOM05D005790 ORTHO05D007464 4.6e-97 359.0 392 50.3
Ah.05g171860 Amaranthus hybridus HOM05D005790 ORTHO05D007464 2.2e-91 340.1 332 51.2
Psat5g014800 Pisum sativum HOM05D005790 ORTHO05D007464 3.5e-89 332.8 239 70.7
Atru.chr13.345 Acer truncatum HOM05D005790 ORTHO05D007464 3.0e-88 329.7 218 70.6
SMO147G0253 Selaginella moellendorffii HOM05D005790 ORTHO05D007464 6.2e-86 322.0 385 44.4
TPR.G30295 Trifolium pratense HOM05D005790 ORTHO05D007464 4.0e-85 319.3 168 86.3
Aa31LG4G5850 Aethionema arabicum HOM05D005790 ORTHO05D007464 2.0e-84 317.0 290 55.9
Mapoly0014s0217 Marchantia polymorpha HOM05D005790 ORTHO05D007464 4.4e-84 315.8 384 43.2
Aqoxy4G01228 Aquilegia oxysepala HOM05D005790 ORTHO05D007464 2.7e-81 306.6 327 48.9
Pp3c20_12860 Physcomitrium patens HOM05D005790 ORTHO05D007464 2.5e-79 300.1 382 42.7
SalBow1G3128 Salvia bowleyana HOM05D005790 ORTHO05D007464 3.6e-78 296.2 213 65.7
Psat5g014760 Pisum sativum HOM05D005790 ORTHO05D007464 3.7e-70 269.6 143 84.6
Oeu061776.2 Olea europaea HOM05D005790 ORTHO05D000708 4.8e-70 269.2 367 42.0
CDE05G1328 Ceratophyllum demersum HOM05D005790 ORTHO05D007464 8.1e-70 268.5 168 69.0
Hund17229 Selenicereus undatus HOM05D005790 ORTHO05D007464 1.6e-65 254.2 146 75.3
Actinidia29793 Actinidia chinensis HOM05D005790 ORTHO05D007464 3.1e-61 240.0 415 39.8
Nitab4.5_0000402g0120 Nicotiana tabacum HOM05D005790 ORTHO05D007464 6.9e-61 238.8 238 53.8
TPR.G30287 Trifolium pratense HOM05D005790 ORTHO05D007464 1.7e-59 234.2 165 69.1
RcHm_v2.0_Chr6g0302231 Rosa chinensis HOM05D005790 ORTHO05D007464 2.3e-56 223.8 251 48.2
RcHm_v2.0_Chr4g0408871 Rosa chinensis HOM05D005790 ORTHO05D007464 5.9e-52 209.1 375 39.2
Nitab4.5_0000402g0130 Nicotiana tabacum HOM05D005790 ORTHO05D007464 2.2e-51 207.2 120 77.5
Gorai.010G006300 Gossypium raimondii HOM05D005790 ORTHO05D007464 2.9e-51 206.8 113 82.3
CBR_g7976 Chara braunii HOM05D001993 ORTHO05D004040 3.8e-51 206.5 564 28.0
MBI09_g08426_MAGBIO Magnolia biondii HOM05D005790 ORTHO05D007464 7.2e-50 202.2 380 36.1
TWI36G0035 Tripterygium wilfordii HOM05D005790 ORTHO05D007464 7.9e-49 198.7 136 69.1
Cpa.g.sc140.27 Carica papaya HOM05D005790 ORTHO05D007464 7.4e-47 192.2 180 51.7
CBR_g24442 Chara braunii HOM05D005790 ORTHO05D007464 1.7e-43 181.0 212 42.0
RcHm_v2.0_Chr6g0302371 Rosa chinensis HOM05D005790 ORTHO05D007464 3.6e-41 173.3 178 53.4
AagrBONN_evm.TU.Sc2ySwM_369.164 Anthoceros agrestis HOM05D005790 ORTHO05D007464 1.3e-38 164.9 272 37.1
Aa31LG4G5860 Aethionema arabicum HOM05D005790 ORTHO05D007464 7.0e-37 159.1 99 71.7
Cre02.g076850 Chlamydomonas reinhardtii HOM05D005790 ORTHO05D007464 1.2e-36 158.3 446 28.7
SEGI_31412 Sequoiadendron giganteum HOM05D005790 ORTHO05D007464 1.0e-35 155.2 252 40.9
Cfa025606 Carpinus fangiana HOM05D005790 ORTHO05D007464 3.6e-25 120.2 384 28.9
Lj4C790T17 Lonicera japonica HOM05D005790 ORTHO05D007464 1.0e-24 118.6 77 67.5
RcHm_v2.0_Chr6g0302301 Rosa chinensis HOM05D005790 ORTHO05D007464 3.7e-22 110.2 82 65.9
HPP92_020941 Vanilla planifolia HOM05D005790 ORTHO05D007464 1.6e-20 104.8 122 40.2
MD15G1017900 Malus domestica HOM05D005790 ORTHO05D007464 2.0e-20 104.4 67 68.7
MD15G1018000 Malus domestica HOM05D005790 ORTHO05D007464 2.0e-20 104.4 67 68.7
Cpa.g.sc140.30 Carica papaya HOM05D005790 ORTHO05D007464 8.5e-19 99.0 54 83.3
PRCOL_00000381 Prasinoderma coloniale HOM05D005790 ORTHO05D007832 4.2e-18 96.7 426 25.4
TAR625G0591 Trochodendron aralioides HOM05D000460 ORTHO05D000333 3.6e-17 93.6 103 48.5
SEGI_12232 Sequoiadendron giganteum HOM05D005790 ORTHO05D007464 8.0e-17 92.4 59 62.7
HPP92_020940 Vanilla planifolia HOM05D005790 ORTHO05D007464 1.8e-16 91.3 55 69.1
Hma1.2p1_1776F.1_g301940 Hydrangea macrophylla HOM05D005790 ORTHO05D007464 8.6e-11 72.4 41 75.6
VMungo0331G1008 Vigna mungo HOM05D005790 ORTHO05D007464 1.0e-08 65.5 27 96.3
COL.COLO4_38433 Corchorus olitorius HOM05D005790 ORTHO05D030850 6.8e-08 62.8 31 77.4
Actinidia29794 Actinidia chinensis HOM05D005790 ORTHO05D030850 4.4e-07 60.1 34 64.7
vmacro12361 Vaccinium macrocarpon HOM05D002561 ORTHO05D006466 5.7e-07 59.7 379 22.2
Sabra17G0011900 Salix brachista HOM05D002561 ORTHO05D006466 7.5e-07 59.3 388 21.9
TPR.G40727 Trifolium pratense HOM05D005790 ORTHO05D007464 7.5e-07 59.3 43 69.8
CDE05G1505 Ceratophyllum demersum HOM05D005790 ORTHO05D007464 2.2e-06 57.8 39 59.0
Sabra13G0073200 Salix brachista HOM05D004758 ORTHO05D006063 2.2e-06 57.8 358 23.7
Duzib052G0349 Durio zibethinus HOM05D002561 ORTHO05D006466 8.3e-06 55.8 97 33.0
Mapoly0143s0027 Marchantia polymorpha HOM05D002561 ORTHO05D006466 8.3e-06 55.8 344 21.8


User provided reference genes

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