Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G205800 Phaseolus vulgaris HOM05D002112 ORTHO05D005830 1.6e-211 739.2 385 100.0
VMungo0647G1998 Vigna mungo HOM05D002112 ORTHO05D005830 1.1e-183 646.7 385 90.1
Glyma.14G040300 Glycine max HOM05D002112 ORTHO05D005830 3.6e-158 562.0 386 77.7
Lalb_Chr17g0347631 Lupinus albus HOM05D002112 ORTHO05D005830 8.5e-152 540.8 386 74.4
Ca_06168_v3 Cicer arietinum L. HOM05D002112 ORTHO05D005830 8.8e-149 530.8 382 74.6
Ca_06185_v3 Cicer arietinum L. HOM05D002112 ORTHO05D005830 8.8e-149 530.8 382 74.6
Haze_01451 Corylus avellana HOM05D002112 ORTHO05D005830 7.4e-148 527.7 386 73.6
Lalb_Chr04g0249531 Lupinus albus HOM05D002112 ORTHO05D005830 2.4e-146 522.7 387 73.9
TPR.G11324 Trifolium pratense HOM05D002112 ORTHO05D005830 4.1e-146 521.9 385 71.9
Medtr5g088340 Medicago truncatula HOM05D002112 ORTHO05D005830 1.5e-145 520.0 385 71.4
Lj6g0007258 Lotus japonicus HOM05D002112 ORTHO05D005830 2.9e-144 515.8 385 71.9
Ca_04336_v3 Cicer arietinum L. HOM05D002112 ORTHO05D005830 6.5e-144 514.6 385 71.9
CiPaw.01G095700 Carya illinoinensis HOM05D002112 ORTHO05D005830 6.1e-142 508.1 385 70.6
Atru.chr4.1269 Acer truncatum HOM05D002112 ORTHO05D005830 5.2e-141 505.0 385 70.6
Glyma.13G074600 Glycine max HOM05D002112 ORTHO05D005830 5.2e-141 505.0 386 70.5
Psat2g021160 Pisum sativum HOM05D002112 ORTHO05D005830 2.0e-140 503.1 386 69.4
QL10p051275 Quercus lobata HOM05D002112 ORTHO05D005830 7.4e-140 501.1 384 70.1
VMungo0540G0891 Vigna mungo HOM05D002112 ORTHO05D005830 9.7e-140 500.7 386 70.2
GSVIVG01010853001 Vitis vinifera HOM05D002112 ORTHO05D005830 1.3e-139 500.4 385 70.1
arahy.Tifrunner.gnm1.ann1.PNXW1P Arachis hypogaea HOM05D002112 ORTHO05D005830 3.7e-139 498.8 391 70.1
arahy.Tifrunner.gnm1.ann1.9N9T88 Arachis hypogaea HOM05D002112 ORTHO05D005830 4.8e-139 498.4 391 70.1
Glyma.20G048400 Glycine max HOM05D002112 ORTHO05D005830 3.1e-138 495.7 386 69.4
Actinidia22156 Actinidia chinensis HOM05D002112 ORTHO05D005830 7.0e-138 494.6 385 68.8
Duzib151G0469 Durio zibethinus HOM05D002112 ORTHO05D005830 9.1e-138 494.2 385 68.1
Medtr3g040090 Medicago truncatula HOM05D002112 ORTHO05D005830 3.5e-137 492.3 385 69.1
Dinv17874 Davidia involucrata HOM05D002112 ORTHO05D005830 4.5e-137 491.9 385 69.9
Manes.04G047300 Manihot esculenta HOM05D002112 ORTHO05D005830 7.7e-137 491.1 385 67.3
Gohir.D10G126900 Gossypium hirsutum HOM05D002112 ORTHO05D005830 2.9e-136 489.2 385 68.1
Lj2A342T117 Lonicera japonica HOM05D002112 ORTHO05D005830 1.5e-135 486.9 391 67.5
Gohir.A10G139900 Gossypium hirsutum HOM05D002112 ORTHO05D005830 1.9e-135 486.5 385 67.5
Ciclev10020598m.g Citrus clementina HOM05D002112 ORTHO05D005830 3.2e-135 485.7 385 66.5
Gorai.011G139800 Gossypium raimondii HOM05D002112 ORTHO05D005830 3.2e-135 485.7 385 67.8
Sabra17G0000800 Salix brachista HOM05D002112 ORTHO05D005830 3.6e-134 482.3 386 67.4
Sabra17G0015800 Salix brachista HOM05D002112 ORTHO05D005830 4.7e-134 481.9 386 67.4
TAR369G0031 Trochodendron aralioides HOM05D002112 ORTHO05D005830 1.4e-133 480.3 385 66.5
Actinidia04201 Actinidia chinensis HOM05D002112 ORTHO05D005830 1.8e-133 479.9 417 64.5
Rhsim07G0082300 Rhododendron simsii HOM05D002112 ORTHO05D005830 6.7e-133 478.0 386 66.1
TWI38G0996 Tripterygium wilfordii HOM05D002112 ORTHO05D005830 8.8e-133 477.6 382 66.8
RcHm_v2.0_Chr2g0118821 Rosa chinensis HOM05D002112 ORTHO05D005830 1.5e-132 476.9 385 67.3
CANSAT78G1637 Cannabis sativa HOM05D002112 ORTHO05D005830 2.0e-132 476.5 385 65.7
Thecc.04G174100 Theobroma cacao HOM05D002112 ORTHO05D005830 2.0e-132 476.5 385 66.5
Potri.017G026100 Populus trichocarpa HOM05D002112 ORTHO05D005830 2.6e-132 476.1 386 66.1
Thhalv10020922m.g Eutrema salsugineum HOM05D002112 ORTHO05D005830 3.3e-132 475.7 386 65.8
Phvul.006G021000 Phaseolus vulgaris HOM05D002112 ORTHO05D005830 3.3e-132 475.7 385 67.0
Solyc02g082030.3 Solanum lycopersicum HOM05D002112 ORTHO05D005830 4.4e-132 475.3 388 63.4
Sopen02g026670 Solanum pennellii HOM05D002112 ORTHO05D005830 4.4e-132 475.3 388 63.4
PGSC0003DMG400007324 Solanum tuberosum HOM05D002112 ORTHO05D005830 7.5e-132 474.6 340 69.1
COL.COLO4_08219 Corchorus olitorius HOM05D002112 ORTHO05D005830 1.7e-131 473.4 385 66.2
vmacro13897 Vaccinium macrocarpon HOM05D002112 ORTHO05D005830 1.7e-131 473.4 387 65.4
Prupe.1G198700 Prunus persica HOM05D002112 ORTHO05D005830 2.2e-131 473.0 377 66.6
Sc19g0002800 Simmondsia chinensis HOM05D002112 ORTHO05D005830 4.8e-131 471.9 385 65.2
Nitab4.5_0000632g0010 Nicotiana tabacum HOM05D002112 ORTHO05D005830 6.3e-131 471.5 340 69.7
THA.LOC104817851 Tarenaya hassleriana HOM05D002112 ORTHO05D005830 6.3e-131 471.5 387 65.4
DCAR_007772 Daucus carota HOM05D002112 ORTHO05D005830 8.2e-131 471.1 321 75.1
MD04G1045800 Malus domestica HOM05D002112 ORTHO05D005830 1.1e-130 470.7 385 64.7
Peaxi162Scf00036g02120 Petunia axillaris HOM05D002112 ORTHO05D005830 4.1e-130 468.8 338 70.1
HanXRQChr02g0033051 Helianthus annuus HOM05D002112 ORTHO05D005830 5.3e-130 468.4 373 66.0
CARHR095970 Cardamine hirsuta HOM05D002112 ORTHO05D005830 7.0e-130 468.0 386 64.8
HanXRQChr12g0380031 Helianthus annuus HOM05D002112 ORTHO05D005830 1.6e-129 466.8 320 73.1
Sp3g18350 Schrenkiella parvula HOM05D002112 ORTHO05D005830 4.5e-129 465.3 386 64.8
CAN.G809.29 Capsicum annuum HOM05D002112 ORTHO05D005830 7.7e-129 464.5 323 70.3
QL11p031638 Quercus lobata HOM05D002112 ORTHO05D005830 7.7e-129 464.5 383 65.5
ECA246G0582 Erigeron canadensis HOM05D002112 ORTHO05D005830 3.8e-128 462.2 320 73.1
Carub.0003s2027 Capsella rubella HOM05D002112 ORTHO05D005830 6.5e-128 461.5 386 64.5
Potri.007G131700 Populus trichocarpa HOM05D002112 ORTHO05D005830 1.5e-127 460.3 386 65.0
AL3G34040 Arabidopsis lyrata HOM05D002112 ORTHO05D005830 2.5e-127 459.5 386 64.2
Sabra07G0106900 Salix brachista HOM05D002112 ORTHO05D005830 5.5e-127 458.4 386 64.8
Sabra07G0118800 Salix brachista HOM05D002112 ORTHO05D005830 5.5e-127 458.4 386 64.8
A05p28600 Brassica napus HOM05D002112 ORTHO05D005377 2.1e-126 456.4 382 63.6
BraA05t21737Z Brassica rapa HOM05D002112 ORTHO05D005377 2.1e-126 456.4 382 63.6
Migut.M02025 Erythranthe guttata HOM05D002112 ORTHO05D005830 2.1e-126 456.4 340 67.9
FvH4_1g23450 Fragaria vesca HOM05D002112 ORTHO05D005830 2.1e-126 456.4 382 64.7
FAN19G2557 Fragaria x ananassa HOM05D002112 ORTHO05D005830 2.1e-126 456.4 382 64.7
FAN26G0200 Fragaria x ananassa HOM05D002112 ORTHO05D005830 2.1e-126 456.4 382 64.7
BolC5t33124H Brassica oleracea HOM05D002112 ORTHO05D005830 3.6e-126 455.7 384 63.8
BcaC05g28317 Brassica carinata HOM05D002112 ORTHO05D005377 4.7e-126 455.3 384 63.8
PSO339G3553 Papaver somniferum HOM05D002112 ORTHO05D005830 6.1e-126 454.9 393 62.8
C05p44010 Brassica napus HOM05D002112 ORTHO05D005377 1.0e-125 454.1 381 63.5
FAN23G2661 Fragaria x ananassa HOM05D002112 ORTHO05D005830 1.8e-125 453.4 382 64.4
BcaB04g20660 Brassica carinata HOM05D002112 ORTHO05D005830 5.2e-125 451.8 370 64.1
Aa31LG8G7130 Aethionema arabicum HOM05D002112 ORTHO05D005830 1.5e-124 450.3 385 62.3
Aqoxy7G04120 Aquilegia oxysepala HOM05D002112 ORTHO05D005830 2.6e-124 449.5 320 70.6
Eucgr.I00215 Eucalyptus grandis HOM05D002112 ORTHO05D005830 7.5e-124 448.0 339 68.7
AUR62031652 Chenopodium quinoa HOM05D002112 ORTHO05D005830 1.7e-123 446.8 386 63.0
BolC1t04335H Brassica oleracea HOM05D002112 ORTHO05D005377 2.2e-123 446.4 374 63.9
Cc09_g04780 Coffea canephora HOM05D002112 ORTHO05D005830 2.2e-123 446.4 341 68.6
MBI14_g20102_MAGBIO Magnolia biondii HOM05D002112 ORTHO05D005830 3.7e-123 445.7 388 61.6
Nn2g10363 Nelumbo nucifera HOM05D002112 ORTHO05D005830 4.8e-123 445.3 337 68.5
SalBow5G0693 Salvia bowleyana HOM05D002112 ORTHO05D005830 1.4e-122 443.7 373 62.5
BcaC09g48987 Brassica carinata HOM05D002112 ORTHO05D005377 4.1e-122 442.2 370 63.5
C01p43770 Brassica napus HOM05D002112 ORTHO05D005830 7.0e-122 441.4 369 63.1
CiPaw.06G167000 Carya illinoinensis HOM05D002112 ORTHO05D005830 5.9e-121 438.3 386 62.7
Nitab4.5_0003902g0080 Nicotiana tabacum HOM05D002112 ORTHO05D005830 1.7e-120 436.8 340 65.9
MELO3C015704.2 Cucumis melo HOM05D002112 ORTHO05D005830 1.1e-119 434.1 386 60.9
unitig_748.g7486 Utricularia gibba HOM05D002112 ORTHO05D005830 4.2e-119 432.2 340 63.8
ATR0559G336 Amborella trichopoda HOM05D002112 ORTHO05D005830 9.5e-119 431.0 384 60.2
Dinv21066 Davidia involucrata HOM05D002112 ORTHO05D005830 1.2e-118 430.6 387 63.3
Peaxi162Scf00276g01115 Petunia axillaris HOM05D002112 ORTHO05D005830 1.4e-117 427.2 382 59.9
DCAR_003742 Daucus carota HOM05D002112 ORTHO05D005830 9.8e-116 421.0 303 72.6
Duzib212G0454 Durio zibethinus HOM05D002112 ORTHO05D005830 1.8e-114 416.8 385 61.0
SGA_v2.0_scaffold16G07839 Striga asiatica HOM05D002112 ORTHO05D005830 6.6e-112 408.3 484 48.3
Haze_10243 Corylus avellana HOM05D002112 ORTHO05D005830 9.5e-111 404.4 386 59.3
BraA01t03533Z Brassica rapa HOM05D002112 ORTHO05D005830 2.1e-110 403.3 373 60.1
Zm00001eb362140 Zea mays HOM05D002112 ORTHO05D005830 8.0e-110 401.4 374 57.0
EL10Ac2g03438 Beta vulgaris HOM05D002112 ORTHO05D005830 1.8e-109 400.2 385 58.4
Gohir.A02G114100 Gossypium hirsutum HOM05D002112 ORTHO05D005830 6.4e-107 391.7 324 64.8
Ah.14g085620 Amaranthus hybridus HOM05D002112 ORTHO05D005830 1.1e-106 391.0 379 57.5
Os01g0974000 Oryza sativa ssp. japonica HOM05D002112 ORTHO05D005830 4.1e-106 389.0 307 63.8
ClCG09G018870 Citrullus lanatus HOM05D002112 ORTHO05D005830 2.7e-105 386.3 466 50.0
Hma1.2p1_2907F.1_g330140 Hydrangea macrophylla HOM05D002112 ORTHO05D005830 2.7e-105 386.3 332 64.2
SEGI_07155 Sequoiadendron giganteum HOM05D002112 ORTHO05D005830 3.3e-103 379.4 342 56.7
Lsat_1_v5_gn_3_102740 Lactuca sativa HOM05D002112 ORTHO05D005830 1.6e-102 377.1 379 56.2
CDE08G1601 Ceratophyllum demersum HOM05D002112 ORTHO05D005830 2.3e-101 373.2 353 55.8
vmacro12410 Vaccinium macrocarpon HOM05D002112 ORTHO05D005830 3.4e-100 369.4 272 71.0
Gohir.A08G075500 Gossypium hirsutum HOM05D002112 ORTHO05D005830 3.5e-97 359.4 285 66.3
BcaB06g26098 Brassica carinata HOM05D002112 ORTHO05D005377 2.3e-96 356.7 325 59.1
Mapoly0038s0049 Marchantia polymorpha HOM05D002112 ORTHO05D005830 5.0e-96 355.5 345 50.1
HPP92_018143 Vanilla planifolia HOM05D002112 ORTHO05D005830 5.6e-95 352.1 335 54.3
Pp3c3_12480 Physcomitrium patens HOM05D002112 ORTHO05D005830 3.6e-94 349.4 340 50.9
Pp3c12_4060 Physcomitrium patens HOM05D002112 ORTHO05D005830 1.2e-92 344.4 311 53.4
ClCG02G003310 Citrullus lanatus HOM05D002112 ORTHO05D005830 2.0e-92 343.6 310 60.6
Lj1A1151T82 Lonicera japonica HOM05D002112 ORTHO05D005830 3.7e-91 339.3 288 62.8
SMO356G0377 Selaginella moellendorffii HOM05D002112 ORTHO05D005830 1.9e-90 337.0 304 54.9
Oeu010462.1 Olea europaea HOM05D002112 ORTHO05D005830 2.1e-89 333.6 291 61.9
MSTRG.24953 Avicennia marina HOM05D002112 ORTHO05D005830 3.5e-89 332.8 283 62.2
PSO151G0006 Papaver somniferum HOM05D002112 ORTHO05D005830 3.5e-89 332.8 395 50.6
CsaV3_7G002030 Cucumis sativus L. HOM05D002112 ORTHO05D005830 1.0e-88 331.3 288 61.5
Psat5g187680 Pisum sativum HOM05D002112 ORTHO05D005830 1.0e-88 331.3 285 63.9
CBR_g24153 Chara braunii HOM05D002112 ORTHO05D005830 1.3e-88 330.9 307 52.8
AagrBONN_evm.TU.Sc2ySwM_362.2463 Anthoceros agrestis HOM05D002112 ORTHO05D005830 1.1e-87 327.8 302 54.0
Sed0017575 Sechium edule HOM05D002112 ORTHO05D005830 3.6e-86 322.8 284 60.2
AT3G20320 Arabidopsis thaliana HOM05D002112 ORTHO05D005830 8.1e-86 321.6 284 61.6
MD13G1257900 Malus domestica HOM05D002112 ORTHO05D005830 4.0e-85 319.3 301 59.1
Cfa004646 Carpinus fangiana HOM05D002112 ORTHO05D005830 6.8e-85 318.5 309 57.3
A01p34360 Brassica napus HOM05D002112 ORTHO05D005830 2.6e-84 316.6 274 60.9
Hund03181 Selenicereus undatus HOM05D002112 ORTHO05D005830 1.0e-80 304.7 278 59.7
Zm00001eb139760 Zea mays HOM05D002112 ORTHO05D005830 4.3e-79 299.3 260 60.4
SHI29120 Sapria himalayana HOM05D002112 ORTHO05D005830 3.9e-72 276.2 341 46.6
TAR623G0168 Trochodendron aralioides HOM05D002112 ORTHO05D005830 7.3e-71 271.9 238 63.4
QL02p069440 Quercus lobata HOM05D002112 ORTHO05D005830 2.1e-70 270.4 204 68.1
MCO07G431 Micromonas commoda HOM05D002112 ORTHO05D005830 1.8e-69 267.3 305 44.6
Peaxi162Scf00580g00069 Petunia axillaris HOM05D002112 ORTHO05D005830 2.4e-69 266.9 229 59.8
Cre16.g694400 Chlamydomonas reinhardtii HOM05D002112 ORTHO05D005830 6.2e-62 242.3 300 43.7
PRCOL_00002736 Prasinoderma coloniale HOM05D002112 ORTHO05D005830 2.4e-61 240.4 302 41.7
Glyma.02G275800 Glycine max HOM05D002112 ORTHO05D005830 1.9e-55 220.7 166 71.1
TAR623G1172 Trochodendron aralioides HOM05D002112 ORTHO05D005830 1.4e-42 177.9 129 72.1
Sc07g0004100 Simmondsia chinensis HOM05D002112 ORTHO05D005830 1.9e-42 177.6 176 56.8
Cpa.g.c39485 Carica papaya HOM05D002112 ORTHO05D005830 1.2e-41 174.9 127 67.7
Oeu010464.1 Olea europaea HOM05D002112 ORTHO05D005830 3.8e-35 153.3 104 77.9
Oeu037772.1 Olea europaea HOM05D002112 ORTHO05D005830 1.1e-34 151.8 103 76.7
FAN28G2322 Fragaria x ananassa HOM05D002112 ORTHO05D005830 1.2e-33 148.3 100 77.0
Lj1A1151T83 Lonicera japonica HOM05D002112 ORTHO05D005830 1.2e-33 148.3 97 81.4
AUR62038882 Chenopodium quinoa HOM05D002112 ORTHO05D005830 1.4e-32 144.8 97 77.3
Gohir.A08G072300 Gossypium hirsutum HOM05D002112 ORTHO05D010805 3.2e-26 123.6 105 59.0
MD13G1258100 Malus domestica HOM05D002112 ORTHO05D005830 1.1e-21 108.6 77 70.1
Peaxi162Scf00036g02121 Petunia axillaris HOM05D002112 ORTHO05D005830 5.2e-16 89.7 61 75.4
A01p34370 Brassica napus HOM05D000233 ORTHO05D000020 6.7e-16 89.4 59 72.9
Cre09.g395028 Chlamydomonas reinhardtii HOM05D002112 ORTHO05D143200 4.1e-13 80.1 137 33.6
Sc09g0004030 Simmondsia chinensis HOM05D005136 ORTHO05D006619 6.5e-11 72.8 64 59.4
Hma1.2p1_1220F.1_g268110 Hydrangea macrophylla HOM05D002112 ORTHO05D005830 8.0e-09 65.9 42 81.0
Hma1.2p1_1220F.1_g268115 Hydrangea macrophylla HOM05D002112 ORTHO05D005830 8.0e-09 65.9 42 81.0
Hma1.2p1_2907F.1_g330145 Hydrangea macrophylla HOM05D002112 ORTHO05D005830 8.0e-09 65.9 42 81.0
Sc07g0004110 Simmondsia chinensis HOM05D002112 ORTHO05D010805 1.5e-07 61.6 51 56.9
SEGI_04192 Sequoiadendron giganteum HOM05D002112 ORTHO05D384887 1.3e-06 58.5 60 51.7


User provided reference genes

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