Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G203900 Phaseolus vulgaris HOM05D007256 ORTHO05D009109 1.2e-72 276.2 122 100.0
VMungo0720G0365 Vigna mungo HOM05D007256 ORTHO05D009109 1.3e-69 266.2 122 95.9
Glyma.10G144700 Glycine max HOM05D007256 ORTHO05D009109 3.7e-53 211.5 128 76.6
Lalb_Chr02g0147641 Lupinus albus HOM05D007256 ORTHO05D009109 3.1e-47 191.8 126 69.8
TPR.G2616 Trifolium pratense HOM05D007256 ORTHO05D009109 8.9e-47 190.3 130 71.5
Psat1g134200 Pisum sativum HOM05D007256 ORTHO05D009109 4.9e-45 184.5 128 69.5
arahy.Tifrunner.gnm1.ann1.H7RZSB Arachis hypogaea HOM05D007256 ORTHO05D009109 6.4e-45 184.1 140 65.7
arahy.Tifrunner.gnm1.ann1.Q851GZ Arachis hypogaea HOM05D007256 ORTHO05D009109 6.4e-45 184.1 140 65.0
Medtr1g084750 Medicago truncatula HOM05D007256 ORTHO05D009109 3.2e-44 181.8 127 68.5
Lj5g0000046 Lotus japonicus HOM05D007256 ORTHO05D009109 5.4e-44 181.0 138 64.5
Ca_10190_v3 Cicer arietinum L. HOM05D007256 ORTHO05D009109 6.0e-43 177.6 134 64.2
TPR.G2644 Trifolium pratense HOM05D007256 ORTHO05D009109 2.1e-40 169.1 136 64.0
Gohir.D13G028200 Gossypium hirsutum HOM05D007256 ORTHO05D009109 7.6e-38 160.6 135 60.0
Gorai.013G032200 Gossypium raimondii HOM05D007256 ORTHO05D009109 7.6e-38 160.6 135 60.0
Gohir.A13G030200 Gossypium hirsutum HOM05D007256 ORTHO05D009109 9.9e-38 160.2 135 60.7
CAN.G1374.8 Capsicum annuum HOM05D007256 ORTHO05D009109 6.4e-37 157.5 132 56.8
Duzib177G1002 Durio zibethinus HOM05D007256 ORTHO05D009109 1.4e-36 156.4 137 56.9
COL.COLO4_05498 Corchorus olitorius HOM05D007256 ORTHO05D009109 1.9e-36 156.0 127 59.1
Nitab4.5_0005710g0050 Nicotiana tabacum HOM05D007256 ORTHO05D009109 3.2e-36 155.2 133 59.4
GSVIVG01031300001 Vitis vinifera HOM05D007256 ORTHO05D009109 3.2e-36 155.2 153 53.6
CiPaw.07G034000 Carya illinoinensis HOM05D007256 ORTHO05D009109 4.1e-36 154.8 131 60.3
PGSC0003DMG400002748 Solanum tuberosum HOM05D007256 ORTHO05D009109 4.1e-36 154.8 132 57.6
Nn4g25434 Nelumbo nucifera HOM05D007256 ORTHO05D009109 1.6e-35 152.9 147 53.1
DCAR_002110 Daucus carota HOM05D007256 ORTHO05D009109 2.1e-35 152.5 145 55.2
CsaV3_1G037970 Cucumis sativus L. HOM05D007256 ORTHO05D009109 6.0e-35 151.0 157 50.3
Peaxi162Scf00357g00431 Petunia axillaris HOM05D007256 ORTHO05D009109 6.0e-35 151.0 152 51.3
Aqoxy2G02591 Aquilegia oxysepala HOM05D007256 ORTHO05D009109 1.3e-34 149.8 131 58.0
Cc02_g35540 Coffea canephora HOM05D007256 ORTHO05D009109 1.7e-34 149.4 137 54.7
Nitab4.5_0002783g0030 Nicotiana tabacum HOM05D007256 ORTHO05D009109 1.7e-34 149.4 152 52.0
Thecc.05G327400 Theobroma cacao HOM05D007256 ORTHO05D009109 1.7e-34 149.4 134 54.5
Hma1.2p1_0052F.1_g030520 Hydrangea macrophylla HOM05D007256 ORTHO05D009109 3.0e-34 148.7 133 53.4
Zm00001eb333750 Zea mays HOM05D007256 ORTHO05D009109 5.1e-34 147.9 167 46.7
Lsat_1_v5_gn_2_17440 Lactuca sativa HOM05D007256 ORTHO05D009109 8.6e-34 147.1 143 55.2
EL10Ac4g09530 Beta vulgaris HOM05D007256 ORTHO05D009109 1.1e-33 146.7 137 55.5
Solyc01g100990.3 Solanum lycopersicum HOM05D007256 ORTHO05D009109 1.9e-33 146.0 153 50.3
ClCG03G017800 Citrullus lanatus HOM05D007256 ORTHO05D009109 2.5e-33 145.6 153 51.6
Sopen01g044450 Solanum pennellii HOM05D007256 ORTHO05D009109 4.3e-33 144.8 153 50.3
Eucgr.B01795 Eucalyptus grandis HOM05D007256 ORTHO05D009109 9.6e-33 143.7 155 50.3
Ciclev10012993m.g Citrus clementina HOM05D007256 ORTHO05D009109 1.2e-32 143.3 157 49.7
ECA238G0534 Erigeron canadensis HOM05D007256 ORTHO05D009109 1.6e-32 142.9 159 49.1
HanXRQChr14g0433581 Helianthus annuus HOM05D007256 ORTHO05D009109 1.6e-32 142.9 145 51.7
Oeu060662.1 Olea europaea HOM05D007256 ORTHO05D009109 2.8e-32 142.1 160 48.8
Cfa006739 Carpinus fangiana HOM05D007256 ORTHO05D009109 3.6e-32 141.7 131 55.7
Migut.B00859 Erythranthe guttata HOM05D007256 ORTHO05D009109 3.6e-32 141.7 152 50.0
PSO210G0513 Papaver somniferum HOM05D007256 ORTHO05D009109 3.6e-32 141.7 154 49.4
Prupe.6G307100 Prunus persica HOM05D007256 ORTHO05D009109 3.6e-32 141.7 151 49.0
CANSAT54G0501 Cannabis sativa HOM05D007256 ORTHO05D009109 6.2e-32 141.0 154 49.4
Gorai.001G184000 Gossypium raimondii HOM05D007256 ORTHO05D009109 6.2e-32 141.0 134 53.7
SGA_v2.0_scaffold438G51636 Striga asiatica HOM05D007256 ORTHO05D009109 8.1e-32 140.6 135 53.3
TAR362G0938 Trochodendron aralioides HOM05D007256 ORTHO05D009109 8.1e-32 140.6 152 49.3
Sed0013353 Sechium edule HOM05D007256 ORTHO05D009109 1.4e-31 139.8 149 50.3
FvH4_6g08160 Fragaria vesca HOM05D007256 ORTHO05D009109 1.8e-31 139.4 139 51.8
FAN14G3866 Fragaria x ananassa HOM05D007256 ORTHO05D009109 3.1e-31 138.7 144 50.7
Haze_04019 Corylus avellana HOM05D007256 ORTHO05D009109 4.0e-31 138.3 153 49.0
PSO761G0366 Papaver somniferum HOM05D007256 ORTHO05D009109 5.2e-31 137.9 156 48.7
Atru.chr12.1603 Acer truncatum HOM05D007256 ORTHO05D009109 6.8e-31 137.5 175 42.9
MSTRG.20366 Avicennia marina HOM05D007256 ORTHO05D009109 8.9e-31 137.1 159 47.2
MELO3C015247.2 Cucumis melo HOM05D000487 ORTHO05D000405 8.9e-31 137.1 153 48.4
TWI12G0874 Tripterygium wilfordii HOM05D007256 ORTHO05D009109 8.9e-31 137.1 157 47.8
QL03p009011 Quercus lobata HOM05D007256 ORTHO05D009109 1.2e-30 136.7 153 48.4
RcHm_v2.0_Chr3g0458031 Rosa chinensis HOM05D007256 ORTHO05D009109 1.2e-30 136.7 151 48.3
AUR62006795 Chenopodium quinoa HOM05D007256 ORTHO05D009109 1.5e-30 136.3 142 52.1
Duzib177G0019 Durio zibethinus HOM05D007256 ORTHO05D009109 1.5e-30 136.3 158 46.2
QL03p009202 Quercus lobata HOM05D007256 ORTHO05D009109 2.0e-30 136.0 154 48.1
MD12G1202300 Malus domestica HOM05D007256 ORTHO05D009109 2.6e-30 135.6 142 47.9
FAN09G0386 Fragaria x ananassa HOM05D007256 ORTHO05D009109 3.4e-30 135.2 151 47.7
SalBow7G1589 Salvia bowleyana HOM05D007256 ORTHO05D009109 5.8e-30 134.4 178 42.7
Pp3c18_1910 Physcomitrium patens HOM05D007256 ORTHO05D009109 9.9e-30 133.7 132 50.8
CDE08G0276 Ceratophyllum demersum HOM05D007256 ORTHO05D009109 1.7e-29 132.9 130 55.4
FAN02G0906 Fragaria x ananassa HOM05D007256 ORTHO05D009109 2.2e-29 132.5 151 46.4
Manes.08G108700 Manihot esculenta HOM05D007256 ORTHO05D009109 3.8e-29 131.7 160 45.6
SEGI_23053 Sequoiadendron giganteum HOM05D007256 ORTHO05D009109 1.1e-28 130.2 156 46.2
Os01g0252200 Oryza sativa ssp. japonica HOM05D007256 ORTHO05D009109 1.4e-28 129.8 168 44.0
Potri.013G004801 Populus trichocarpa HOM05D007256 ORTHO05D009109 7.1e-28 127.5 152 47.4
unitig_699.g19800 Utricularia gibba HOM05D007256 ORTHO05D009109 2.7e-27 125.6 176 42.6
QL03p009259 Quercus lobata HOM05D007256 ORTHO05D009109 4.6e-27 124.8 153 47.1
Thhalv10005088m.g Eutrema salsugineum HOM05D007256 ORTHO05D009109 1.0e-26 123.6 146 43.8
Mapoly0054s0011 Marchantia polymorpha HOM05D007256 ORTHO05D009109 1.0e-26 123.6 148 45.9
HPP92_001218 Vanilla planifolia HOM05D007256 ORTHO05D009109 1.7e-26 122.9 133 48.9
Sabra13G0003900 Salix brachista HOM05D007256 ORTHO05D009109 8.7e-26 120.6 152 46.1
A09p05700 Brassica napus HOM05D007256 ORTHO05D009109 1.1e-25 120.2 152 42.8
AL6G38610 Arabidopsis lyrata HOM05D007256 ORTHO05D009109 1.9e-25 119.4 148 43.2
Aa31LG11G9900 Aethionema arabicum HOM05D007256 ORTHO05D009109 2.5e-25 119.0 130 48.5
THA.LOC104821748 Tarenaya hassleriana HOM05D007256 ORTHO05D009109 2.5e-25 119.0 140 47.9
BcaB04g19715 Brassica carinata HOM05D007256 ORTHO05D009109 4.3e-25 118.2 149 43.6
BcaC04g23634 Brassica carinata HOM05D007256 ORTHO05D009109 1.6e-24 116.3 149 43.0
C09p06290 Brassica napus HOM05D007256 ORTHO05D009109 1.6e-24 116.3 149 43.0
Cpa.g.sc48.207 Carica papaya HOM05D007256 ORTHO05D009109 1.6e-24 116.3 154 44.2
Hund07289 Selenicereus undatus HOM05D007256 ORTHO05D009109 1.6e-24 116.3 235 34.0
Sp2g21240 Schrenkiella parvula HOM05D007256 ORTHO05D009109 4.8e-24 114.8 132 48.5
BraA09t36210Z Brassica rapa HOM05D007256 ORTHO05D009109 2.6e-22 109.0 169 38.5
AT5G26749 Arabidopsis thaliana HOM05D007256 ORTHO05D009109 9.9e-22 107.1 167 38.3
ATR0693G354 Amborella trichopoda HOM05D007256 ORTHO05D009109 1.7e-21 106.3 98 54.1
BolC9t53549H Brassica oleracea HOM05D007256 ORTHO05D009109 2.2e-21 105.9 165 38.8
Gohir.D01G139700 Gossypium hirsutum HOM05D007256 ORTHO05D009109 6.4e-21 104.4 107 53.3
Sc09g0002500 Simmondsia chinensis HOM05D007256 ORTHO05D009109 2.4e-20 102.4 91 51.6
Carub.0006s2440 Capsella rubella HOM05D007256 ORTHO05D009109 3.9e-18 95.1 90 50.0
vmacro19770 Vaccinium macrocarpon HOM05D007256 ORTHO05D009109 9.6e-17 90.5 222 31.1
Aqoxy4G00797 Aquilegia oxysepala HOM05D007256 ORTHO05D009109 4.8e-16 88.2 122 44.3
Glyma.20G093702 Glycine max HOM05D007256 ORTHO05D009109 6.9e-15 84.3 65 64.6
PGR042G2181 Punica granatum HOM05D007256 ORTHO05D009109 1.7e-13 79.7 90 48.9
FAN05G3272 Fragaria x ananassa HOM05D000487 ORTHO05D000405 2.2e-13 79.3 106 42.5
Rhsim05G0121300 Rhododendron simsii HOM05D007256 ORTHO05D009109 7.1e-12 74.3 70 52.9
HPP92_001189 Vanilla planifolia HOM05D007256 ORTHO05D009109 2.7e-11 72.4 57 54.4
Ah.10g027130 Amaranthus hybridus HOM05D007256 ORTHO05D009109 7.9e-11 70.9 69 53.6
CARHR186830 Cardamine hirsuta HOM05D007256 ORTHO05D009109 4.8e-08 61.6 41 63.4
SHI06526 Sapria himalayana HOM05D007256 ORTHO05D009109 6.2e-08 61.2 42 54.8
Gohir.D01G148000 Gossypium hirsutum HOM05D002544 ORTHO05D009109 5.8e-06 54.7 30 76.7


User provided reference genes

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