Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G016900 Phaseolus vulgaris HOM05D001734 ORTHO05D023218 3.4e-36 154.5 77 100.0
VMungo0720G2261 Vigna mungo HOM05D001734 ORTHO05D006943 1.0e-27 126.3 76 84.2
Lj5g0001935 Lotus japonicus HOM05D001734 ORTHO05D006943 1.4e-26 122.5 76 78.9
Glyma.10G284200 Glycine max HOM05D001734 ORTHO05D006943 1.9e-26 122.1 76 80.3
Medtr1g113830 Medicago truncatula HOM05D001734 ORTHO05D006943 1.0e-24 116.3 74 77.0
TPR.G2476 Trifolium pratense HOM05D001734 ORTHO05D006943 2.3e-24 115.2 74 77.0
arahy.Tifrunner.gnm1.ann1.M4HWYD Arachis hypogaea HOM05D001734 ORTHO05D006943 8.7e-24 113.2 76 68.4
TPR.G2452 Trifolium pratense HOM05D001734 ORTHO05D023218 7.4e-23 110.2 74 75.7
Lalb_Chr06g0163781 Lupinus albus HOM05D001734 ORTHO05D006943 3.1e-21 104.8 76 68.4
Ca_03288_v3 Cicer arietinum L. HOM05D001734 ORTHO05D006943 1.5e-20 102.4 74 68.9
GSVIVG01023964001 Vitis vinifera HOM05D001734 ORTHO05D006943 2.2e-19 98.6 74 62.2
QL11p052553 Quercus lobata HOM05D001734 ORTHO05D006943 8.5e-19 96.7 69 63.8
Cfa005306 Carpinus fangiana HOM05D001734 ORTHO05D023218 7.2e-18 93.6 75 60.0
TWI79G0733 Tripterygium wilfordii HOM05D001734 ORTHO05D006943 7.2e-18 93.6 69 63.8
Actinidia18030 Actinidia chinensis HOM05D001734 ORTHO05D006943 1.2e-17 92.8 74 59.5
Cfa005298 Carpinus fangiana HOM05D001734 ORTHO05D006943 6.1e-17 90.5 74 59.5
CiPaw.06G119600 Carya illinoinensis HOM05D001734 ORTHO05D006943 7.9e-17 90.1 74 59.5
Haze_02089 Corylus avellana HOM05D001734 ORTHO05D006943 1.8e-16 89.0 66 63.6
Thecc.02G053500 Theobroma cacao HOM05D001734 ORTHO05D006943 2.3e-16 88.6 69 60.9
CSS0001027 Camellia sinensis var. sinensis HOM05D001734 ORTHO05D006943 3.0e-16 88.2 67 62.7
CSS0020547 Camellia sinensis var. sinensis HOM05D001734 ORTHO05D006943 3.0e-16 88.2 67 62.7
Potri.004G179000 Populus trichocarpa HOM05D001734 ORTHO05D006943 5.1e-16 87.4 74 55.4
FAN15G3013 Fragaria x ananassa HOM05D001734 ORTHO05D006943 1.9e-15 85.5 74 56.8
FAN20G0548 Fragaria x ananassa HOM05D001734 ORTHO05D006943 1.9e-15 85.5 74 56.8
FAN24G0945 Fragaria x ananassa HOM05D001734 ORTHO05D006943 1.9e-15 85.5 74 56.8
FAN27G0836 Fragaria x ananassa HOM05D001734 ORTHO05D006943 2.5e-15 85.1 74 56.8
Manes.04G069900 Manihot esculenta HOM05D001734 ORTHO05D006943 3.3e-15 84.7 67 62.7
Duzib052G0295 Durio zibethinus HOM05D001734 ORTHO05D006943 5.7e-15 84.0 70 55.7
Gohir.D12G036700 Gossypium hirsutum HOM05D001734 ORTHO05D006943 7.4e-15 83.6 69 58.0
Gorai.008G037900 Gossypium raimondii HOM05D001734 ORTHO05D006943 7.4e-15 83.6 69 58.0
Hma1.2p1_0032F.1_g019090 Hydrangea macrophylla HOM05D001734 ORTHO05D006943 1.3e-14 82.8 74 55.4
FvH4_2g15770 Fragaria vesca HOM05D001734 ORTHO05D006943 1.6e-14 82.4 74 55.4
Gohir.A12G035900 Gossypium hirsutum HOM05D001734 ORTHO05D006943 2.8e-14 81.6 69 56.5
Nn6g31886 Nelumbo nucifera HOM05D001734 ORTHO05D006943 1.8e-13 79.0 69 50.7
Sabra04G0120500 Salix brachista HOM05D001734 ORTHO05D006943 1.8e-13 79.0 74 51.4
Ciclev10027660m.g Citrus clementina HOM05D001734 ORTHO05D006943 3.1e-13 78.2 74 55.4
DCAR_022421 Daucus carota HOM05D001734 ORTHO05D006943 3.1e-13 78.2 70 55.7
Rhsim11G0194400 Rhododendron simsii HOM05D001734 ORTHO05D006943 3.1e-13 78.2 74 48.6
vmacro02297 Vaccinium macrocarpon HOM05D001734 ORTHO05D006943 3.1e-13 78.2 66 59.1
Lj5A175T98 Lonicera japonica HOM05D001734 ORTHO05D006943 4.1e-13 77.8 74 51.4
RcHm_v2.0_Chr6g0279121 Rosa chinensis HOM05D001734 ORTHO05D006943 4.1e-13 77.8 74 52.7
Prupe.8G170300 Prunus persica HOM05D001734 ORTHO05D006943 6.9e-13 77.0 69 53.6
Aqoxy5G01087 Aquilegia oxysepala HOM05D001734 ORTHO05D006943 9.1e-13 76.6 64 62.5
TAR628G1453 Trochodendron aralioides HOM05D001734 ORTHO05D006943 1.2e-12 76.3 66 56.1
CAN.G588.109 Capsicum annuum HOM05D001734 ORTHO05D006943 1.5e-12 75.9 75 48.0
PGR142G2610 Punica granatum HOM05D001734 ORTHO05D006943 1.5e-12 75.9 71 52.1
MBI18_g09841_MAGBIO Magnolia biondii HOM05D001734 ORTHO05D006943 2.6e-12 75.1 74 52.7
Nitab4.5_0004557g0050 Nicotiana tabacum HOM05D001734 ORTHO05D006943 2.6e-12 75.1 75 48.0
arahy.Tifrunner.gnm1.ann1.BIP73Y Arachis hypogaea HOM05D006870 ORTHO05D008475 3.4e-12 74.7 59 62.7
Dinv14134 Davidia involucrata HOM05D001734 ORTHO05D006943 5.9e-12 73.9 74 51.4
Sopen01g053910 Solanum pennellii HOM05D001734 ORTHO05D006943 1.0e-11 73.2 75 48.0
SGA_v2.0_scaffold32G13315 Striga asiatica HOM05D001734 ORTHO05D006943 1.0e-11 73.2 72 47.2
MELO3C013324.2 Cucumis melo HOM05D001734 ORTHO05D006943 1.3e-11 72.8 71 49.3
ClCG02G003850 Citrullus lanatus HOM05D001734 ORTHO05D006943 1.7e-11 72.4 71 50.7
CsaV3_7G001280 Cucumis sativus L. HOM05D001734 ORTHO05D006943 1.7e-11 72.4 71 47.9
Nitab4.5_0004867g0090 Nicotiana tabacum HOM05D001734 ORTHO05D006943 2.2e-11 72.0 75 48.0
Solyc01g111870.3 Solanum lycopersicum HOM05D001734 ORTHO05D006943 2.2e-11 72.0 75 46.7
Cc09_g10400 Coffea canephora HOM05D001734 ORTHO05D006943 2.9e-11 71.6 69 53.6
Peaxi162Scf00362g00442 Petunia axillaris HOM05D001734 ORTHO05D006943 3.8e-11 71.2 75 46.7
CANSAT25G2086 Cannabis sativa HOM05D001734 ORTHO05D006943 5.0e-11 70.9 65 58.5
Migut.B00045 Erythranthe guttata HOM05D001734 ORTHO05D006943 5.0e-11 70.9 72 50.0
Psat6g232760 Pisum sativum HOM05D001734 ORTHO05D006943 5.0e-11 70.9 45 73.3
Ah.01g023340 Amaranthus hybridus HOM05D001734 ORTHO05D006943 1.4e-10 69.3 61 59.0
Eucgr.I01462 Eucalyptus grandis HOM05D001734 ORTHO05D006943 1.4e-10 69.3 76 48.7
Sed0017558 Sechium edule HOM05D001734 ORTHO05D006943 1.4e-10 69.3 71 47.9
MD05G1126600 Malus domestica HOM05D001734 ORTHO05D006943 1.9e-10 68.9 73 46.6
AUR62010002 Chenopodium quinoa HOM05D001734 ORTHO05D006943 7.2e-10 67.0 59 52.5
PSO210G4774 Papaver somniferum HOM05D001734 ORTHO05D006943 7.2e-10 67.0 63 52.4
Sc18g0006200 Simmondsia chinensis HOM05D001734 ORTHO05D006943 7.2e-10 67.0 73 46.6
AUR62012990 Chenopodium quinoa HOM05D001734 ORTHO05D006943 2.1e-09 65.5 59 50.8
PSO170G1896 Papaver somniferum HOM05D001734 ORTHO05D006943 2.1e-09 65.5 64 51.6
EL10Ac9g21328 Beta vulgaris HOM05D001734 ORTHO05D006943 3.6e-09 64.7 53 56.6
HanXRQChr05g0141851 Helianthus annuus HOM05D001734 ORTHO05D006943 4.6e-09 64.3 76 40.8
Hund00010 Selenicereus undatus HOM05D001734 ORTHO05D006943 6.1e-09 63.9 53 64.2
Atru.chr2.2183 Acer truncatum HOM05D001734 ORTHO05D023218 1.4e-08 62.8 53 64.2
HPP92_022388 Vanilla planifolia HOM05D001734 ORTHO05D006943 3.9e-08 61.2 66 50.0
Lsat_1_v5_gn_3_6601 Lactuca sativa HOM05D001734 ORTHO05D006943 2.6e-07 58.5 58 55.2
SEGI_35062 Sequoiadendron giganteum HOM05D001734 ORTHO05D006943 7.4e-07 57.0 70 42.9
ECA234G4688 Erigeron canadensis HOM05D001734 ORTHO05D006943 9.7e-07 56.6 66 43.9


User provided reference genes

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