Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G302400 Phaseolus vulgaris HOM05D005445 ORTHO05D007043 1.7e-177 625.9 320 100.0
VMungo0251G0086 Vigna mungo HOM05D005445 ORTHO05D007043 8.3e-169 597.0 321 95.3
Glyma.08G027200 Glycine max HOM05D005445 ORTHO05D007043 1.0e-158 563.5 322 90.4
Glyma.05G220700 Glycine max HOM05D005445 ORTHO05D007043 3.7e-153 545.0 322 88.8
Ca_17431_v3 Cicer arietinum L. HOM05D005445 ORTHO05D007043 5.2e-147 524.6 322 85.4
Ca_17440_v3 Cicer arietinum L. HOM05D005445 ORTHO05D007043 5.2e-147 524.6 322 85.4
Lj4g0004845 Lotus japonicus HOM05D005445 ORTHO05D007043 7.5e-146 520.8 318 85.5
Psat7g020920 Pisum sativum HOM05D005445 ORTHO05D007043 2.3e-142 509.2 322 83.9
arahy.Tifrunner.gnm1.ann1.HNJF4G Arachis hypogaea HOM05D005445 ORTHO05D007043 3.0e-142 508.8 321 81.9
Lalb_Chr09g0332001 Lupinus albus HOM05D005445 ORTHO05D007043 1.9e-141 506.1 321 82.2
Medtr8g101230 Medicago truncatula HOM05D005445 ORTHO05D007043 4.7e-140 501.5 322 82.9
TPR.G25470 Trifolium pratense HOM05D005445 ORTHO05D007043 8.1e-140 500.7 319 82.8
Thecc.09G196900 Theobroma cacao HOM05D005445 ORTHO05D007043 3.5e-135 485.3 323 78.3
arahy.Tifrunner.gnm1.ann1.K4ERET Arachis hypogaea HOM05D005445 ORTHO05D007043 1.1e-133 480.3 362 72.7
Atru.chr7.1013 Acer truncatum HOM05D005445 ORTHO05D007043 3.3e-133 478.8 323 78.3
CiPaw.15G161100 Carya illinoinensis HOM05D005445 ORTHO05D007043 3.3e-133 478.8 323 76.5
Ciclev10008923m.g Citrus clementina HOM05D005445 ORTHO05D007043 1.8e-131 473.0 323 76.5
Gohir.A08G017100 Gossypium hirsutum HOM05D005445 ORTHO05D007043 1.8e-131 473.0 321 75.7
Gohir.D08G027500 Gossypium hirsutum HOM05D005445 ORTHO05D007043 1.2e-130 470.3 321 75.4
Prupe.1G063800 Prunus persica HOM05D005445 ORTHO05D007043 3.4e-130 468.8 323 75.9
QL11p008649 Quercus lobata HOM05D005445 ORTHO05D007043 8.4e-129 464.2 363 68.0
Gorai.004G024500 Gossypium raimondii HOM05D005445 ORTHO05D007043 1.1e-128 463.8 326 74.2
MD16G1238000 Malus domestica HOM05D005445 ORTHO05D007043 1.1e-128 463.8 323 75.2
Dinv12613 Davidia involucrata HOM05D005445 ORTHO05D007043 3.2e-128 462.2 322 74.2
Cpa.g.sc115.19 Carica papaya HOM05D005445 ORTHO05D007043 5.4e-128 461.5 312 76.6
CANSAT80G1260 Cannabis sativa HOM05D005445 ORTHO05D007043 1.6e-127 459.9 321 75.4
Hma1.2p1_0314F.1_g122070 Hydrangea macrophylla HOM05D005445 ORTHO05D007043 2.7e-127 459.1 322 73.3
Manes.02G221800 Manihot esculenta HOM05D005445 ORTHO05D007043 7.8e-127 457.6 306 76.8
TWI63G1185 Tripterygium wilfordii HOM05D005445 ORTHO05D007043 1.7e-126 456.4 321 75.1
Actinidia07565 Actinidia chinensis HOM05D005445 ORTHO05D007043 6.6e-126 454.5 322 73.3
GSVIVG01032266001 Vitis vinifera HOM05D005445 ORTHO05D007043 8.7e-126 454.1 323 74.0
RcHm_v2.0_Chr4g0397601 Rosa chinensis HOM05D005445 ORTHO05D007043 3.3e-125 452.2 323 74.6
CSS0000968 Camellia sinensis var. sinensis HOM05D005445 ORTHO05D007043 5.6e-125 451.4 323 71.5
CiPaw.16G104300 Carya illinoinensis HOM05D005445 ORTHO05D007043 7.3e-125 451.1 324 73.8
Solyc07g017400.3 Solanum lycopersicum HOM05D005445 ORTHO05D007043 3.6e-124 448.7 322 70.2
FvH4_4g06040 Fragaria vesca HOM05D005445 ORTHO05D007043 6.2e-124 448.0 322 74.5
Cfa020755 Carpinus fangiana HOM05D005445 ORTHO05D007043 1.4e-123 446.8 307 77.2
Duzib168G0912 Durio zibethinus HOM05D005445 ORTHO05D007043 4.0e-123 445.3 336 72.0
TAR383G0382 Trochodendron aralioides HOM05D005445 ORTHO05D007043 4.0e-123 445.3 328 71.3
Sopen07g006100 Solanum pennellii HOM05D005445 ORTHO05D007043 1.2e-122 443.7 322 69.6
FAN17G2613 Fragaria x ananassa HOM05D005445 ORTHO05D007043 2.0e-122 443.0 321 73.5
Nn8g41135 Nelumbo nucifera HOM05D005445 ORTHO05D007043 2.0e-122 443.0 326 69.9
TAR383G1024 Trochodendron aralioides HOM05D005445 ORTHO05D007043 2.9e-121 439.1 316 72.8
CAN.G146.2 Capsicum annuum HOM05D005445 ORTHO05D007043 5.4e-120 434.9 322 68.3
Rhsim04G0099700 Rhododendron simsii HOM05D005445 ORTHO05D007043 7.1e-120 434.5 319 69.0
Nitab4.5_0000899g0030 Nicotiana tabacum HOM05D005445 ORTHO05D007043 9.3e-120 434.1 312 70.2
Nitab4.5_0004036g0030 Nicotiana tabacum HOM05D005445 ORTHO05D007043 2.7e-119 432.6 307 71.3
MBI13_g31572_MAGBIO Magnolia biondii HOM05D005445 ORTHO05D007043 7.9e-119 431.0 317 72.6
Eucgr.C00062 Eucalyptus grandis HOM05D005445 ORTHO05D007043 3.9e-118 428.7 310 73.2
FAN07G1413 Fragaria x ananassa HOM05D005445 ORTHO05D007043 5.1e-118 428.3 321 72.3
MELO3C003927.2 Cucumis melo HOM05D005445 ORTHO05D007043 6.7e-118 427.9 319 70.5
CsaV3_2G009110 Cucumis sativus L. HOM05D005445 ORTHO05D007043 1.1e-117 427.2 320 70.6
Aqoxy7G02630 Aquilegia oxysepala HOM05D005445 ORTHO05D007043 2.5e-117 426.0 321 70.4
ClCG11G011350 Citrullus lanatus HOM05D005445 ORTHO05D007043 1.5e-114 416.8 320 69.4
DCAR_020460 Daucus carota HOM05D005445 ORTHO05D007043 2.0e-114 416.4 321 67.3
Duzib170G0675 Durio zibethinus HOM05D005445 ORTHO05D007043 2.0e-114 416.4 321 69.5
PGR142G0598 Punica granatum HOM05D005445 ORTHO05D007043 4.9e-113 411.8 306 72.9
HPP92_028347 Vanilla planifolia HOM05D005445 ORTHO05D007043 8.4e-113 411.0 314 68.5
MSTRG.26517 Avicennia marina HOM05D005445 ORTHO05D007043 2.4e-112 409.5 322 65.8
CDE06G0990 Ceratophyllum demersum HOM05D005445 ORTHO05D007043 3.2e-112 409.1 318 67.9
THA.LOC104815270 Tarenaya hassleriana HOM05D005445 ORTHO05D007043 9.3e-112 407.5 291 70.1
Sabra06G0059700 Salix brachista HOM05D005445 ORTHO05D007043 4.6e-111 405.2 322 68.9
Cc00_g00070 Coffea canephora HOM05D005445 ORTHO05D007043 1.0e-110 404.1 323 65.9
Sed0003073 Sechium edule HOM05D005445 ORTHO05D007043 6.7e-110 401.4 291 72.2
Hund03231 Selenicereus undatus HOM05D005445 ORTHO05D007043 4.3e-109 398.7 323 66.6
SGA_v2.0_scaffold485G52365 Striga asiatica HOM05D005445 ORTHO05D007043 4.3e-109 398.7 322 65.2
ECA234G2663 Erigeron canadensis HOM05D005445 ORTHO05D007043 9.6e-109 397.5 321 64.5
Sp4g09300 Schrenkiella parvula HOM05D005445 ORTHO05D007043 9.6e-109 397.5 302 68.5
Oeu028820.1 Olea europaea HOM05D005445 ORTHO05D007043 1.3e-108 397.1 299 67.2
ATR0626G233 Amborella trichopoda HOM05D005445 ORTHO05D007043 2.8e-108 396.0 328 63.7
AT2G26590 Arabidopsis thaliana HOM05D005445 ORTHO05D007043 4.8e-108 395.2 301 67.4
BcaB01g03027 Brassica carinata HOM05D005445 ORTHO05D007043 6.9e-107 391.3 301 67.1
SalBow5G4362 Salvia bowleyana HOM05D005445 ORTHO05D007043 9.0e-107 391.0 324 64.8
AL4G19530 Arabidopsis lyrata HOM05D005445 ORTHO05D007043 1.5e-106 390.2 298 66.8
BcaC01g04909 Brassica carinata HOM05D005445 ORTHO05D007043 1.5e-106 390.2 301 66.8
CARHR118490 Cardamine hirsuta HOM05D005445 ORTHO05D007043 1.5e-106 390.2 301 65.8
C03p32210 Brassica napus HOM05D005445 ORTHO05D007043 1.0e-105 387.5 301 66.1
BraA03t11899Z Brassica rapa HOM05D005445 ORTHO05D007043 1.0e-105 387.5 307 65.8
Thhalv10000977m.g Eutrema salsugineum HOM05D005445 ORTHO05D007043 1.0e-105 387.5 296 68.9
BolC3t15563H Brassica oleracea HOM05D005445 ORTHO05D007043 2.9e-105 386.0 307 65.5
Aa31LG5G9140 Aethionema arabicum HOM05D005445 ORTHO05D007043 1.4e-104 383.6 301 64.5
Potri.006G078800 Populus trichocarpa HOM05D005445 ORTHO05D007043 1.2e-103 380.6 319 65.8
PSO063G4940 Papaver somniferum HOM05D005445 ORTHO05D007043 6.0e-103 378.3 318 65.1
Thhalv10016855m.g Eutrema salsugineum HOM05D005445 ORTHO05D007043 2.3e-102 376.3 293 66.6
PSO170G6081 Papaver somniferum HOM05D005445 ORTHO05D007043 6.7e-102 374.8 318 64.8
Os05g0594800 Oryza sativa ssp. japonica HOM05D005445 ORTHO05D007043 8.7e-102 374.4 308 65.6
Carub.0004s0844 Capsella rubella HOM05D005445 ORTHO05D007043 2.5e-101 372.9 300 64.0
HanXRQChr10g0309531 Helianthus annuus HOM05D005445 ORTHO05D007043 2.5e-101 372.9 298 66.1
A03p26880 Brassica napus HOM05D005445 ORTHO05D007043 4.3e-101 372.1 307 64.2
Migut.L01918 Erythranthe guttata HOM05D005445 ORTHO05D007043 4.8e-100 368.6 299 63.9
Lsat_1_v5_gn_5_80620 Lactuca sativa HOM05D005445 ORTHO05D007043 4.8e-100 368.6 303 64.0
Lalb_Chr05g0223811 Lupinus albus HOM05D005445 ORTHO05D007043 4.8e-100 368.6 244 80.3
Zm00001eb297230 Zea mays HOM05D005445 ORTHO05D007043 1.6e-95 353.6 316 60.8
Lj5C772G2 Lonicera japonica HOM05D005445 ORTHO05D007043 1.3e-94 350.5 272 66.2
Ah.10g032730 Amaranthus hybridus HOM05D005445 ORTHO05D007043 5.7e-93 345.1 324 59.6
Peaxi162Scf01184g00140 Petunia axillaris HOM05D005445 ORTHO05D007043 7.4e-93 344.7 339 56.6
EL10Ac2g03624 Beta vulgaris HOM05D005445 ORTHO05D007043 5.3e-91 338.6 341 56.9
unitig_85.g27245 Utricularia gibba HOM05D005445 ORTHO05D007043 5.9e-90 335.1 300 58.0
vmacro20760 Vaccinium macrocarpon HOM05D005445 ORTHO05D007043 1.1e-88 330.9 376 49.7
AUR62027984 Chenopodium quinoa HOM05D005445 ORTHO05D007043 1.9e-88 330.1 329 57.8
SEGI_14233 Sequoiadendron giganteum HOM05D005445 ORTHO05D007043 3.2e-88 329.3 326 54.9
AUR62020729 Chenopodium quinoa HOM05D005445 ORTHO05D007043 1.3e-84 317.4 298 58.7
Dinv26479 Davidia involucrata HOM05D005445 ORTHO05D007043 5.9e-82 308.5 222 73.9
Hma1.2p1_0314F.1_g122080 Hydrangea macrophylla HOM05D005445 ORTHO05D007043 6.7e-78 295.0 220 71.8
Pp3c21_370 Physcomitrium patens HOM05D005445 ORTHO05D007043 9.7e-77 291.2 326 50.0
Dinv00323 Davidia involucrata HOM05D005445 ORTHO05D007043 1.9e-72 276.9 196 74.5
Sc14g0007060 Simmondsia chinensis HOM05D005445 ORTHO05D007043 4.8e-68 262.3 226 65.9
SMO116G0379 Selaginella moellendorffii HOM05D005445 ORTHO05D007043 2.7e-63 246.5 294 48.3
Mapoly0011s0124 Marchantia polymorpha HOM05D005445 ORTHO05D007043 1.8e-62 243.8 335 46.6
COL.COLO4_23410 Corchorus olitorius HOM05D005445 ORTHO05D007043 9.8e-61 238.0 152 76.3
CDE02G2220 Ceratophyllum demersum HOM05D005445 ORTHO05D007043 6.3e-60 235.3 226 60.2
CBR_g28055 Chara braunii HOM05D005445 ORTHO05D007043 1.1e-56 224.6 346 39.9
Haze_19097 Corylus avellana HOM05D005445 ORTHO05D007043 2.0e-50 203.8 201 57.7
Sc14g0006300 Simmondsia chinensis HOM05D005445 ORTHO05D007043 7.0e-43 178.7 124 73.4
HPP92_015797 Vanilla planifolia HOM05D005445 ORTHO05D007043 2.8e-31 140.2 284 36.3
vmacro10242 Vaccinium macrocarpon HOM05D002150 ORTHO05D002191 2.3e-30 137.1 93 71.0
vmacro07726 Vaccinium macrocarpon HOM05D005445 ORTHO05D007043 1.2e-29 134.8 90 72.2
C03p32230 Brassica napus HOM05D005445 ORTHO05D007043 2.9e-28 130.2 90 73.3
BolC3t15564H Brassica oleracea HOM05D005445 ORTHO05D007043 2.9e-28 130.2 90 73.3
MD13G1232400 Malus domestica HOM05D005445 ORTHO05D007043 4.9e-28 129.4 175 51.4
MCO02G027 Micromonas commoda HOM05D005445 ORTHO05D007043 1.4e-27 127.9 354 28.8
Cre11.g469450 Chlamydomonas reinhardtii HOM05D005445 ORTHO05D007043 1.2e-23 114.8 340 28.8
Lalb_Chr05g0223801 Lupinus albus HOM05D005445 ORTHO05D007043 4.0e-22 109.8 72 75.0
HanXRQChr09g0242991 Helianthus annuus HOM05D005445 ORTHO05D007043 9.2e-19 98.6 83 65.1
SHI03135 Sapria himalayana HOM05D005445 ORTHO05D007043 3.9e-17 93.2 52 82.7
SGA_v2.0_scaffold21G09605 Striga asiatica HOM05D005445 ORTHO05D007043 6.2e-15 85.9 96 49.0
HanXRQChr09g0248391 Helianthus annuus HOM05D005445 ORTHO05D007043 8.1e-15 85.5 80 60.0
HanXRQChr09g0242981 Helianthus annuus HOM05D005445 ORTHO05D007043 1.8e-14 84.3 80 58.8
HanXRQChr13g0395691 Helianthus annuus HOM05D005445 ORTHO05D007043 1.8e-14 84.3 80 58.8
HanXRQChr09g0246171 Helianthus annuus HOM05D005445 ORTHO05D007043 6.9e-14 82.4 78 59.0
vmacro04822 Vaccinium macrocarpon HOM05D005445 ORTHO05D007043 1.9e-11 74.3 44 75.0
TPR.G25462 Trifolium pratense HOM05D000254 ORTHO05D000165 7.8e-10 68.9 92 46.7
Potri.003G027722 Populus trichocarpa HOM05D005445 ORTHO05D007043 1.5e-08 64.7 64 54.7
TPR.G25476 Trifolium pratense HOM05D000254 ORTHO05D000165 5.6e-08 62.8 62 62.9


User provided reference genes

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