Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G279600 Phaseolus vulgaris HOM05D007034 ORTHO05D008665 0.0e+00 2004.6 995 100.0
VMungo0251G1097 Vigna mungo HOM05D007034 ORTHO05D008665 0.0e+00 1719.9 1101 80.9
Glyma.08G005800 Glycine max HOM05D007034 ORTHO05D008665 0.0e+00 1548.5 1066 76.5
Psat7g040600 Pisum sativum HOM05D007034 ORTHO05D008665 0.0e+00 1294.6 1086 64.4
Lj4g0024388 Lotus japonicus HOM05D007034 ORTHO05D008665 0.0e+00 1294.3 1064 66.0
Medtr8g095490 Medicago truncatula HOM05D007034 ORTHO05D008665 0.0e+00 1283.1 1089 63.8
Ca_16833_v3 Cicer arietinum L. HOM05D007034 ORTHO05D008665 0.0e+00 1264.6 1038 65.4
TPR.G12786 Trifolium pratense HOM05D007034 ORTHO05D008665 0.0e+00 1255.0 1021 65.7
arahy.Tifrunner.gnm1.ann1.XWK03B Arachis hypogaea HOM05D007034 ORTHO05D008665 0.0e+00 1208.0 1159 58.1
arahy.Tifrunner.gnm1.ann1.FYEN8G Arachis hypogaea HOM05D007034 ORTHO05D008665 0.0e+00 1199.9 1179 57.2
Lalb_Chr07g0183941 Lupinus albus HOM05D007034 ORTHO05D008665 0.0e+00 1156.4 1142 57.2
Thecc.03G143600 Theobroma cacao HOM05D007034 ORTHO05D008665 2.5e-280 969.1 1128 49.1
Haze_19381 Corylus avellana HOM05D007034 ORTHO05D008665 1.8e-278 963.0 1079 50.1
Gohir.D07G050000 Gossypium hirsutum HOM05D007034 ORTHO05D008665 5.7e-277 958.0 1127 48.2
Prupe.5G138100 Prunus persica HOM05D007034 ORTHO05D008665 3.5e-274 948.7 1117 48.5
Gorai.001G053100 Gossypium raimondii HOM05D007034 ORTHO05D008665 5.0e-273 944.9 1124 47.9
MD06G1128300 Malus domestica HOM05D007034 ORTHO05D008665 2.5e-272 942.6 1105 49.3
Gohir.A07G045600 Gossypium hirsutum HOM05D007034 ORTHO05D008665 4.7e-271 938.3 1127 48.0
Ciclev10030559m.g Citrus clementina HOM05D007034 ORTHO05D008665 2.9e-268 929.1 1156 47.1
RcHm_v2.0_Chr7g0188231 Rosa chinensis HOM05D007034 ORTHO05D008665 6.4e-268 927.9 1088 49.0
Duzib205G0091 Durio zibethinus HOM05D007034 ORTHO05D008665 6.6e-265 917.9 1118 47.7
EL10Ac7g17117 Beta vulgaris HOM05D007034 ORTHO05D008665 6.2e-263 911.4 1085 47.9
GSVIVG01014061001 Vitis vinifera HOM05D007034 ORTHO05D008665 1.5e-261 906.7 1062 47.8
FAN08G2641 Fragaria x ananassa HOM05D007034 ORTHO05D008665 1.4e-259 900.2 1120 48.3
CANSAT56G2345 Cannabis sativa HOM05D007034 ORTHO05D008665 7.8e-258 894.4 1065 47.6
Potri.012G111800 Populus trichocarpa HOM05D007034 ORTHO05D008665 1.3e-257 893.6 1139 46.4
TAR374G0491 Trochodendron aralioides HOM05D007034 ORTHO05D008665 8.6e-257 891.0 1162 45.3
Actinidia18277 Actinidia chinensis HOM05D007034 ORTHO05D008665 1.6e-250 870.2 1131 45.1
C02p03100 Brassica napus HOM05D007034 ORTHO05D008665 1.3e-249 867.1 1054 45.5
Sabra12G0081400 Salix brachista HOM05D007034 ORTHO05D008665 6.6e-249 864.8 1135 45.5
BolC2t06271H Brassica oleracea HOM05D007034 ORTHO05D008665 2.5e-248 862.8 1057 45.3
Nn3g16191 Nelumbo nucifera HOM05D007034 ORTHO05D008665 2.1e-247 859.8 1133 43.7
Ah.15g089920 Amaranthus hybridus HOM05D007034 ORTHO05D008665 5.2e-246 855.1 1044 46.3
BraA02t04915Z Brassica rapa HOM05D007034 ORTHO05D008665 8.9e-246 854.4 1058 45.2
BcaC03g13189 Brassica carinata HOM05D007034 ORTHO05D008665 2.6e-245 852.8 1057 45.0
AL6G17700 Arabidopsis lyrata HOM05D007034 ORTHO05D008665 1.4e-243 847.0 1085 45.4
Dinv13693 Davidia involucrata HOM05D007034 ORTHO05D008665 3.2e-243 845.9 984 48.2
THA.LOC104818293 Tarenaya hassleriana HOM05D007034 ORTHO05D008665 1.2e-242 844.0 1100 45.1
Carub.0006s0637 Capsella rubella HOM05D007034 ORTHO05D008665 2.1e-242 843.2 1087 45.1
Aa31LG3G18970 Aethionema arabicum HOM05D007034 ORTHO05D008665 8.7e-241 837.8 1088 44.4
BcaB05g21618 Brassica carinata HOM05D007034 ORTHO05D008665 2.5e-240 836.3 1077 44.7
Rhsim08G0200400 Rhododendron simsii HOM05D007034 ORTHO05D008665 2.1e-239 833.2 1096 43.7
TWI23G0512 Tripterygium wilfordii HOM05D007034 ORTHO05D008665 1.5e-237 827.0 1144 44.1
PSO017G2510 Papaver somniferum HOM05D007034 ORTHO05D008665 4.4e-237 825.5 1025 46.2
Manes.06G128800 Manihot esculenta HOM05D007034 ORTHO05D008665 2.2e-236 823.2 1125 44.1
PGR042G1727 Punica granatum HOM05D007034 ORTHO05D008665 2.7e-234 816.2 1110 44.4
BcaB05g21619 Brassica carinata HOM05D007034 ORTHO05D008665 4.6e-234 815.5 1052 44.2
Sc10g0005150 Simmondsia chinensis HOM05D007034 ORTHO05D008665 2.3e-233 813.1 726 56.5
Cc04_g05570 Coffea canephora HOM05D007034 ORTHO05D008665 6.6e-233 811.6 1100 43.7
PSO017G4759 Papaver somniferum HOM05D007034 ORTHO05D008665 3.6e-231 805.8 1026 45.5
Aqoxy5G02954 Aquilegia oxysepala HOM05D007034 ORTHO05D008665 3.1e-230 802.7 1069 45.3
Oeu012864.4 Olea europaea HOM05D007034 ORTHO05D008665 9.0e-230 801.2 1071 43.9
CAN.G1008.36 Capsicum annuum HOM05D007034 ORTHO05D008665 3.4e-229 799.3 1089 42.5
Thhalv10012509m.g Eutrema salsugineum HOM05D007034 ORTHO05D008665 4.5e-229 798.9 1097 44.3
PGSC0003DMG400014226 Solanum tuberosum HOM05D007034 ORTHO05D008665 2.4e-227 793.1 1088 42.3
Sp6g35470 Schrenkiella parvula HOM05D007034 ORTHO05D008665 3.2e-227 792.7 1071 44.0
AUR62029782 Chenopodium quinoa HOM05D007034 ORTHO05D008665 9.3e-227 791.2 971 46.7
FvH4_5g10030 Fragaria vesca HOM05D007034 ORTHO05D008665 9.3e-227 791.2 904 50.8
Eucgr.G00023 Eucalyptus grandis HOM05D007034 ORTHO05D008665 1.0e-225 787.7 1110 43.0
SGA_v2.0_scaffold37G14662 Striga asiatica HOM05D007034 ORTHO05D008665 7.4e-224 781.6 1128 42.6
DCAR_025620 Daucus carota HOM05D007034 ORTHO05D008665 2.7e-218 763.1 1152 40.7
QL10p035731 Quercus lobata HOM05D007034 ORTHO05D008665 1.4e-214 750.7 862 48.7
SalBow7G3686 Salvia bowleyana HOM05D007034 ORTHO05D008665 2.6e-213 746.5 1105 41.7
Atru.BG.50.p Acer truncatum HOM05D007034 ORTHO05D008665 4.2e-211 739.2 722 55.8
HanXRQChr05g0154511 Helianthus annuus HOM05D007034 ORTHO05D008665 7.2e-211 738.4 1102 40.3
Solyc03g117960.4 Solanum lycopersicum HOM05D007034 ORTHO05D008665 3.9e-209 732.6 1058 41.5
ECA246G4515 Erigeron canadensis HOM05D007034 ORTHO05D008665 1.8e-206 723.8 1091 40.1
FAN04G0206 Fragaria x ananassa HOM05D007034 ORTHO05D008665 6.9e-206 721.8 976 45.9
FAN18G0345 Fragaria x ananassa HOM05D007034 ORTHO05D008665 6.9e-206 721.8 697 55.4
Nitab4.5_0009037g0010 Nicotiana tabacum HOM05D007034 ORTHO05D008665 4.5e-205 719.2 730 50.7
HPP92_006434 Vanilla planifolia HOM05D007034 ORTHO05D008665 5.0e-204 715.7 1008 40.8
Sopen03g036860 Solanum pennellii HOM05D007034 ORTHO05D008665 1.0e-201 708.0 725 50.1
Lsat_1_v5_gn_5_9280 Lactuca sativa HOM05D007034 ORTHO05D008665 2.3e-201 706.8 1093 39.9
Nitab4.5_0000976g0250 Nicotiana tabacum HOM05D007034 ORTHO05D008665 3.0e-201 706.4 726 52.3
Zm00001eb084530 Zea mays HOM05D007034 ORTHO05D008665 3.9e-193 679.5 965 42.5
Os04g0403400 Oryza sativa ssp. japonica HOM05D007034 ORTHO05D008665 9.7e-192 674.9 968 42.4
Lj5C84G9 Lonicera japonica HOM05D007034 ORTHO05D008665 3.1e-190 669.8 1112 38.7
Migut.I00651 Erythranthe guttata HOM05D007034 ORTHO05D008665 2.6e-189 666.8 955 42.7
ATR0582G190 Amborella trichopoda HOM05D007034 ORTHO05D008665 3.5e-189 666.4 730 48.6
vmacro19093 Vaccinium macrocarpon HOM05D007034 ORTHO05D008665 2.5e-187 660.2 799 47.1
Glyma.05G198600 Glycine max HOM05D007034 ORTHO05D008665 2.2e-183 647.1 1093 42.5
MBI11_g45190_MAGBIO Magnolia biondii HOM05D007034 ORTHO05D008665 1.6e-173 614.4 931 40.3
AT5G07400 Arabidopsis thaliana HOM05D007034 ORTHO05D008665 7.2e-171 605.5 835 43.5
MBI11_g13136_MAGBIO Magnolia biondii HOM05D007034 ORTHO05D008665 2.3e-164 583.9 733 45.7
Peaxi162Scf00314g00825 Petunia axillaris HOM05D007034 ORTHO05D008665 8.6e-156 555.4 553 51.7
CARHR205750 Cardamine hirsuta HOM05D007034 ORTHO05D008665 3.5e-149 533.5 529 52.9
AagrBONN_evm.TU.Sc2ySwM_340.151 Anthoceros agrestis HOM05D007034 ORTHO05D008665 1.2e-130 471.9 998 32.3
SMO139G0138 Selaginella moellendorffii HOM05D007034 ORTHO05D008665 2.3e-124 451.1 985 31.6
MD09G1063600 Malus domestica HOM05D007034 ORTHO05D008665 4.9e-119 433.3 522 48.1
Cpa.g.sc13.204 Carica papaya HOM05D007034 ORTHO05D008665 1.5e-112 411.8 367 56.9
CBR_g36305 Chara braunii HOM05D007034 ORTHO05D008665 4.5e-96 357.1 832 30.2
Cpa.g.sc13.203 Carica papaya HOM05D007034 ORTHO05D008665 1.7e-90 338.6 596 37.6
COL.COLO4_37288 Corchorus olitorius HOM05D007034 ORTHO05D008665 1.0e-87 329.3 703 36.4
CDE09G0293 Ceratophyllum demersum HOM05D007034 ORTHO05D006780 1.9e-70 271.9 479 38.0
COL.COLO4_37289 Corchorus olitorius HOM05D000001 ORTHO05D000003 2.0e-48 198.7 190 54.7
CSS0039283 Camellia sinensis var. sinensis HOM05D007034 ORTHO05D008665 3.2e-41 174.9 164 57.3
QL10p035719 Quercus lobata HOM05D007034 ORTHO05D008665 4.1e-41 174.5 167 54.5
MBI11_g40919_MAGBIO Magnolia biondii HOM05D007034 ORTHO05D008665 1.6e-40 172.6 182 54.4
CSS0021292 Camellia sinensis var. sinensis HOM05D007034 ORTHO05D008665 5.0e-39 167.5 164 54.3
SEGI_36690 Sequoiadendron giganteum HOM05D007034 ORTHO05D008665 1.5e-38 166.0 127 55.9
Glyma.17G184700 Glycine max HOM05D007034 ORTHO05D006448 1.5e-35 156.0 83 78.3
Peaxi162Scf00314g00824 Petunia axillaris HOM05D007034 ORTHO05D008665 9.8e-35 153.3 93 71.0
CSS0014219 Camellia sinensis var. sinensis HOM05D007034 ORTHO05D008665 4.1e-33 147.9 121 57.0
Cpa.g.c43582 Carica papaya HOM05D007034 ORTHO05D008665 4.3e-30 137.9 131 57.3
TAR622G0913 Trochodendron aralioides HOM05D007034 ORTHO05D008665 4.6e-24 117.9 283 33.2
HanXRQChr10g0301151 Helianthus annuus HOM05D007034 ORTHO05D008665 3.0e-23 115.2 73 60.3
TAR622G0405 Trochodendron aralioides HOM05D001184 ORTHO05D007940 3.2e-17 95.1 136 38.2
CSS0045322 Camellia sinensis var. sinensis HOM05D007034 ORTHO05D008665 4.6e-16 91.3 69 60.9
Zm00001eb094900 Zea mays HOM05D000085 ORTHO05D014542 1.0e-15 90.1 70 57.1
CSS0025577 Camellia sinensis var. sinensis HOM05D007034 ORTHO05D008665 1.3e-15 89.7 69 59.4
Actinidia25500 Actinidia chinensis HOM05D007034 ORTHO05D008665 1.8e-12 79.3 79 58.2
VMungo0540G1802 Vigna mungo HOM05D007034 ORTHO05D000739 2.9e-10 72.0 45 80.0
Atru.chr6.1955 Acer truncatum HOM05D007034 ORTHO05D008665 2.4e-09 68.9 86 44.2
MBI11_g13135_MAGBIO Magnolia biondii HOM05D007034 ORTHO05D008665 1.0e-07 63.5 214 27.6
CSS0041671 Camellia sinensis var. sinensis HOM05D007034 ORTHO05D008665 9.6e-06 57.0 62 46.8


User provided reference genes

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