Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G248200 Phaseolus vulgaris HOM05D005383 ORTHO05D006722 1.4e-156 556.6 373 100.0
VMungo0251G3735 Vigna mungo HOM05D005383 ORTHO05D006722 1.5e-150 536.6 373 97.3
Glyma.05G167900 Glycine max HOM05D005383 ORTHO05D006722 1.7e-141 506.5 373 93.8
Glyma.08G126300 Glycine max HOM05D005383 ORTHO05D006722 6.1e-139 498.0 374 92.0
Ca_00052_v3 Cicer arietinum L. HOM05D005383 ORTHO05D006722 1.0e-117 427.6 376 82.2
Lalb_Chr07g0185851 Lupinus albus HOM05D005383 ORTHO05D006722 6.6e-109 398.3 386 81.1
TPR.G2110 Trifolium pratense HOM05D005383 ORTHO05D006722 8.9e-106 387.9 379 79.7
QL02p099934 Quercus lobata HOM05D005383 ORTHO05D006722 7.5e-105 384.8 375 78.9
GSVIVG01023286001 Vitis vinifera HOM05D005383 ORTHO05D006722 1.3e-104 384.0 376 78.2
Lalb_Chr13g0295611 Lupinus albus HOM05D005383 ORTHO05D006722 3.7e-104 382.5 385 80.3
Psat1g221920 Pisum sativum HOM05D005383 ORTHO05D006722 3.7e-104 382.5 378 78.8
FvH4_5g28700 Fragaria vesca HOM05D005383 ORTHO05D006722 2.4e-103 379.8 376 78.2
FAN08G2879 Fragaria x ananassa HOM05D005383 ORTHO05D006722 1.2e-102 377.5 376 77.7
Duzib248G0552 Durio zibethinus HOM05D005383 ORTHO05D006722 2.7e-102 376.3 377 63.1
Lj4g0022432 Lotus japonicus HOM05D005383 ORTHO05D006722 4.6e-102 375.6 372 80.6
Thecc.02G025800 Theobroma cacao HOM05D005383 ORTHO05D006722 4.6e-102 375.6 375 78.7
COL.COLO4_17761 Corchorus olitorius HOM05D005383 ORTHO05D006722 1.7e-101 373.6 377 62.6
CiPaw.05G051100 Carya illinoinensis HOM05D005383 ORTHO05D006722 3.0e-101 372.9 377 76.4
CANSAT54G1323 Cannabis sativa HOM05D005383 ORTHO05D006722 3.9e-101 372.5 378 76.7
arahy.Tifrunner.gnm1.ann1.UJ0XJV Arachis hypogaea HOM05D005383 ORTHO05D006722 5.0e-101 372.1 376 78.2
Gohir.A01G182000 Gossypium hirsutum HOM05D005383 ORTHO05D006722 8.6e-101 371.3 377 77.2
Gohir.D01G173100 Gossypium hirsutum HOM05D005383 ORTHO05D006722 2.5e-100 369.8 377 76.7
Gorai.002G214700 Gossypium raimondii HOM05D005383 ORTHO05D006722 2.5e-100 369.8 377 76.7
Ciclev10001534m.g Citrus clementina HOM05D005383 ORTHO05D006722 5.6e-100 368.6 377 75.3
Sed0026787 Sechium edule HOM05D005383 ORTHO05D006722 2.8e-99 366.3 377 75.9
FAN13G0305 Fragaria x ananassa HOM05D005383 ORTHO05D006722 1.1e-98 364.4 399 66.7
RcHm_v2.0_Chr7g0220861 Rosa chinensis HOM05D005383 ORTHO05D006722 1.4e-98 364.0 378 75.7
Ciclev10003783m.g Citrus clementina HOM05D005383 ORTHO05D006722 3.1e-98 362.8 377 75.6
Atru.chr6.733 Acer truncatum HOM05D005383 ORTHO05D006722 4.0e-98 362.5 376 76.3
MD08G1239600 Malus domestica HOM05D005383 ORTHO05D006722 8.9e-98 361.3 379 73.4
Haze_01820 Corylus avellana HOM05D005383 ORTHO05D006722 2.0e-97 360.1 404 61.4
Eucgr.G00356 Eucalyptus grandis HOM05D005383 ORTHO05D006722 2.0e-97 360.1 377 75.6
Prupe.1G576100 Prunus persica HOM05D005383 ORTHO05D006722 1.3e-96 357.5 377 65.5
CSS0013900 Camellia sinensis var. sinensis HOM05D005383 ORTHO05D006722 1.7e-96 357.1 379 75.2
CSS0016011 Camellia sinensis var. sinensis HOM05D005383 ORTHO05D006722 1.7e-96 357.1 379 75.2
CiPaw.06G143700 Carya illinoinensis HOM05D005383 ORTHO05D006722 1.4e-95 354.0 376 65.2
MSTRG.5117 Avicennia marina HOM05D005383 ORTHO05D006722 3.5e-94 349.4 375 74.4
Dinv01847 Davidia involucrata HOM05D005383 ORTHO05D006722 3.5e-94 349.4 368 76.9
Nn5g27588 Nelumbo nucifera HOM05D005383 ORTHO05D006722 8.6e-93 344.7 376 74.7
Cpa.g.sc161.1 Carica papaya HOM05D005383 ORTHO05D006722 1.5e-92 344.0 377 74.0
EL10Ac2g02705 Beta vulgaris HOM05D005383 ORTHO05D006722 2.1e-91 340.1 376 74.2
Cc02_g22940 Coffea canephora HOM05D005383 ORTHO05D006722 4.7e-91 339.0 375 74.1
CsaV3_5G029920 Cucumis sativus L. HOM05D005383 ORTHO05D006722 1.8e-90 337.0 377 73.5
TAR628G0519 Trochodendron aralioides HOM05D005383 ORTHO05D006722 3.1e-90 336.3 377 73.5
Sed0022153 Sechium edule HOM05D005383 ORTHO05D006722 1.2e-89 334.3 376 72.6
Nitab4.5_0009812g0010 Nicotiana tabacum HOM05D005383 ORTHO05D006722 3.4e-89 332.8 365 72.9
Nitab4.5_0000548g0200 Nicotiana tabacum HOM05D005383 ORTHO05D006722 2.2e-88 330.1 375 72.0
MELO3C011837.2 Cucumis melo HOM05D005383 ORTHO05D006722 2.9e-88 329.7 377 72.4
PGSC0003DMG400009082 Solanum tuberosum HOM05D005383 ORTHO05D006722 8.4e-88 328.2 370 70.8
Rhsim11G0125900 Rhododendron simsii HOM05D005383 ORTHO05D006722 1.9e-87 327.0 372 72.8
Peaxi162Scf00003g04037 Petunia axillaris HOM05D005383 ORTHO05D006722 9.2e-87 324.7 343 74.6
DCAR_025351 Daucus carota HOM05D005383 ORTHO05D006722 1.2e-86 324.3 344 73.8
Solyc03g083310.4 Solanum lycopersicum HOM05D005383 ORTHO05D006722 3.5e-86 322.8 387 69.3
arahy.Tifrunner.gnm1.ann1.I6AGPX Arachis hypogaea HOM05D005383 ORTHO05D006722 4.6e-86 322.4 350 79.1
Manes.10G120600 Manihot esculenta HOM05D005383 ORTHO05D006722 4.6e-86 322.4 378 70.9
TWI23G0375 Tripterygium wilfordii HOM05D005383 ORTHO05D006722 7.8e-86 321.6 377 71.1
Potri.003G010400 Populus trichocarpa HOM05D005383 ORTHO05D006722 1.3e-85 320.9 380 71.1
THA.LOC104801420 Tarenaya hassleriana HOM05D005383 ORTHO05D006722 2.3e-85 320.1 386 69.9
PGR042G1418 Punica granatum HOM05D005383 ORTHO05D006722 8.7e-85 318.2 387 66.9
Potri.004G221700 Populus trichocarpa HOM05D005383 ORTHO05D006722 1.1e-84 317.8 383 70.5
Hund12945 Selenicereus undatus HOM05D005383 ORTHO05D006722 1.5e-84 317.4 376 62.0
arahy.Tifrunner.gnm1.ann1.E4SRBI Arachis hypogaea HOM05D005383 ORTHO05D006722 1.9e-84 317.0 350 78.0
Hma1.2p1_1108F.1_g257860 Hydrangea macrophylla HOM05D005383 ORTHO05D006722 2.1e-83 313.5 377 70.6
TAR381G0956 Trochodendron aralioides HOM05D005383 ORTHO05D006722 6.9e-82 308.5 377 69.2
CAN.G968.1 Capsicum annuum HOM05D005383 ORTHO05D006722 1.2e-81 307.8 380 68.9
Sopen03g023060 Solanum pennellii HOM05D005383 ORTHO05D006722 1.2e-81 307.8 383 67.4
TWI59G0781 Tripterygium wilfordii HOM05D005383 ORTHO05D006722 9.9e-81 304.7 377 69.8
vmacro01730 Vaccinium macrocarpon HOM05D005383 ORTHO05D006722 2.9e-80 303.1 382 69.9
Migut.B00804 Erythranthe guttata HOM05D005383 ORTHO05D006722 2.7e-78 296.6 357 70.0
Lj9A301T38 Lonicera japonica HOM05D005383 ORTHO05D006722 4.8e-75 285.8 359 70.5
HanXRQChr04g0103661 Helianthus annuus HOM05D005383 ORTHO05D006722 1.1e-74 284.6 383 68.1
Ciclev10003892m.g Citrus clementina HOM05D005383 ORTHO05D006722 2.4e-74 283.5 330 64.5
Sabra03G0005300 Salix brachista HOM05D005383 ORTHO05D006722 1.2e-73 281.2 498 39.8
CDE02G2650 Ceratophyllum demersum HOM05D005383 ORTHO05D006722 9.3e-71 271.6 379 67.3
SGA_v2.0_scaffold42G15921 Striga asiatica HOM05D005383 ORTHO05D006722 9.3e-71 271.6 390 63.6
CDE08G1140 Ceratophyllum demersum HOM05D005383 ORTHO05D006722 1.2e-70 271.2 379 66.5
PSO063G2254 Papaver somniferum HOM05D005383 ORTHO05D006722 1.2e-70 271.2 365 67.1
BcaC04g20728 Brassica carinata HOM05D005383 ORTHO05D006722 1.6e-70 270.8 386 63.7
BolC9t56882H Brassica oleracea HOM05D005383 ORTHO05D006722 1.6e-70 270.8 386 63.7
BraSC35t46002Z Brassica rapa HOM05D005383 ORTHO05D006722 1.6e-70 270.8 386 63.7
A10p07980 Brassica napus HOM05D005383 ORTHO05D006722 2.1e-70 270.4 386 63.7
Aa31LG3G14030 Aethionema arabicum HOM05D005383 ORTHO05D006722 7.9e-70 268.5 388 64.7
ECA233G1887 Erigeron canadensis HOM05D005383 ORTHO05D006722 1.0e-69 268.1 364 68.4
Thhalv10028723m.g Eutrema salsugineum HOM05D005383 ORTHO05D006722 1.8e-69 267.3 379 63.9
Lsat_1_v5_gn_4_6600 Lactuca sativa HOM05D005383 ORTHO05D006722 1.8e-69 267.3 382 64.7
HanXRQChr08g0209021 Helianthus annuus HOM05D005383 ORTHO05D006722 2.3e-69 266.9 345 68.4
unitig_699.g19853 Utricularia gibba HOM05D005383 ORTHO05D006722 1.9e-68 263.8 381 45.4
Sp6g13330 Schrenkiella parvula HOM05D005383 ORTHO05D006722 1.3e-67 261.2 387 63.0
PSO017G2626 Papaver somniferum HOM05D005383 ORTHO05D006722 1.6e-67 260.8 366 66.7
AL6G41240 Arabidopsis lyrata HOM05D005383 ORTHO05D006722 2.1e-67 260.4 389 62.7
C03p19190 Brassica napus HOM05D005383 ORTHO05D006722 2.8e-67 260.0 382 63.4
Carub.0006s2631 Capsella rubella HOM05D005383 ORTHO05D006722 2.8e-67 260.0 379 64.1
Actinidia00189 Actinidia chinensis HOM05D005383 ORTHO05D006722 2.4e-66 256.9 281 79.0
AT4G06634 Arabidopsis thaliana HOM05D005383 ORTHO05D006722 4.0e-66 256.1 380 64.5
BcaB08g35467 Brassica carinata HOM05D005383 ORTHO05D006722 5.3e-66 255.8 387 61.0
C09p39820 Brassica napus HOM05D005383 ORTHO05D006722 1.5e-65 254.2 369 64.0
Aqoxy6G00141 Aquilegia oxysepala HOM05D005383 ORTHO05D006722 9.9e-65 251.5 333 69.4
A03p16300 Brassica napus HOM05D005383 ORTHO05D006722 1.7e-64 250.8 384 61.5
BolC3t14307H Brassica oleracea HOM05D005383 ORTHO05D006722 6.4e-64 248.8 393 55.0
CARHR260070 Cardamine hirsuta HOM05D005383 ORTHO05D006722 1.9e-63 247.3 381 63.8
BraA03t10921Z Brassica rapa HOM05D005383 ORTHO05D006722 4.2e-63 246.1 384 51.3
Oeu036675.1 Olea europaea HOM05D005383 ORTHO05D006722 6.0e-62 242.3 322 70.8
MSTRG.16504 Avicennia marina HOM05D005383 ORTHO05D006722 1.3e-61 241.1 321 71.7
Sc07g0004970 Simmondsia chinensis HOM05D005383 ORTHO05D006722 6.7e-61 238.8 328 71.6
BcaC01g06099 Brassica carinata HOM05D005383 ORTHO05D006722 4.0e-58 229.6 375 60.5
ATR0071G030 Amborella trichopoda HOM05D005383 ORTHO05D006722 6.5e-56 222.2 332 70.5
BcaC01g06075 Brassica carinata HOM05D005383 ORTHO05D006722 2.5e-55 220.3 378 59.5
Lsat_1_v5_gn_8_160061 Lactuca sativa HOM05D005383 ORTHO05D006722 1.0e-53 214.9 267 72.7
HPP92_009272 Vanilla planifolia HOM05D005383 ORTHO05D006722 2.3e-53 213.8 365 60.0
unitig_747.g21262 Utricularia gibba HOM05D005383 ORTHO05D006722 1.5e-52 211.1 368 59.8
HPP92_013744 Vanilla planifolia HOM05D006763 ORTHO05D008659 5.3e-50 202.6 304 64.5
AUR62041111 Chenopodium quinoa HOM05D005383 ORTHO05D006722 4.5e-49 199.5 177 64.4
Peaxi162Scf03254g00012 Petunia axillaris HOM05D005383 ORTHO05D006722 7.2e-47 192.2 165 62.4
Os05g0106000 Oryza sativa ssp. japonica HOM05D005383 ORTHO05D006722 2.5e-44 183.7 381 54.3
Actinidia39015 Actinidia chinensis HOM05D005383 ORTHO05D006722 4.3e-44 183.0 132 80.3
Sabra01G0167800 Salix brachista HOM05D005383 ORTHO05D006722 1.3e-43 181.4 185 59.5
Os02g0551900 Oryza sativa ssp. japonica HOM05D005383 ORTHO05D006722 3.7e-43 179.9 358 57.3
MD15G1431100 Malus domestica HOM05D005383 ORTHO05D006722 1.8e-42 177.6 307 61.9
FAN04G2588 Fragaria x ananassa HOM05D005383 ORTHO05D006722 3.1e-42 176.8 132 77.3
ClCG11G013400 Citrullus lanatus HOM05D005383 ORTHO05D006722 2.2e-40 170.6 132 75.8
Zm00001eb267130 Zea mays HOM05D005383 ORTHO05D006722 2.1e-38 164.1 369 52.8
CAN.G982.21 Capsicum annuum HOM05D005383 ORTHO05D006722 6.1e-38 162.5 170 53.5
Zm00001eb243510 Zea mays HOM05D005383 ORTHO05D006722 9.7e-36 155.2 292 57.5
Zm00001eb181970 Zea mays HOM05D005383 ORTHO05D006722 1.7e-35 154.5 302 57.3
SEGI_13518 Sequoiadendron giganteum HOM05D005383 ORTHO05D006722 8.0e-30 135.6 115 72.2
FAN18G2475 Fragaria x ananassa HOM05D005383 ORTHO05D006722 5.3e-26 122.9 134 62.7
Mapoly0095s0037 Marchantia polymorpha HOM05D005383 ORTHO05D006722 2.6e-25 120.6 356 50.6
CBR_g52462 Chara braunii HOM05D005383 ORTHO05D006722 1.5e-23 114.8 276 55.4
Peaxi162Scf00003g03953 Petunia axillaris HOM05D000011 ORTHO05D011267 1.5e-23 114.8 155 44.5
AagrBONN_evm.TU.Sc2ySwM_228.1706 Anthoceros agrestis HOM05D005383 ORTHO05D006722 1.6e-22 111.3 236 62.3
Pp3c7_7980 Physcomitrium patens HOM05D005383 ORTHO05D006722 2.8e-19 100.5 409 46.7
ATR0071G005 Amborella trichopoda HOM05D005383 ORTHO05D006722 1.2e-17 95.1 104 53.8
SMO347G0081 Selaginella moellendorffii HOM05D005383 ORTHO05D006722 4.5e-17 93.2 229 54.1
arahy.Tifrunner.gnm1.ann1.VA1YNF Arachis hypogaea HOM05D005383 ORTHO05D006722 1.5e-15 88.2 84 73.8
arahy.Tifrunner.gnm1.ann1.L3LYUI Arachis hypogaea HOM05D005383 ORTHO05D031493 8.8e-13 79.0 58 65.5
arahy.Tifrunner.gnm1.ann1.0L29ML Arachis hypogaea HOM05D005383 ORTHO05D006722 1.5e-12 78.2 56 67.9
arahy.Tifrunner.gnm1.ann1.XX0GIY Arachis hypogaea HOM05D005383 ORTHO05D006722 7.5e-12 75.9 56 66.1


User provided reference genes

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