Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G151001 Phaseolus vulgaris HOM05D005885 ORTHO05D008127 2.4e-65 251.9 116 100.0
Phvul.002G059800 Phaseolus vulgaris HOM05D005885 ORTHO05D008127 1.2e-45 186.4 93 91.4
VMungo1215G0841 Vigna mungo HOM05D005885 ORTHO05D008127 1.2e-45 186.4 93 91.4
Glyma.11G029500 Glycine max HOM05D005885 ORTHO05D008127 1.5e-43 179.5 93 87.1
Lalb_Chr09g0324521 Lupinus albus HOM05D005885 ORTHO05D008127 5.5e-38 161.0 93 77.4
Psat2g179680 Pisum sativum HOM05D005885 ORTHO05D008127 1.8e-36 156.0 93 74.2
Ca_06688_v3 Cicer arietinum L. HOM05D005885 ORTHO05D008127 6.7e-36 154.1 93 74.2
Aqoxy7G00633 Aquilegia oxysepala HOM05D005885 ORTHO05D008127 2.6e-35 152.1 93 73.1
Medtr5g011780 Medicago truncatula HOM05D005885 ORTHO05D008127 3.3e-35 151.8 93 72.0
Aa31LG1G2270 Aethionema arabicum HOM05D005885 ORTHO05D008127 7.4e-35 150.6 92 71.7
BcaB03g13192 Brassica carinata HOM05D005885 ORTHO05D008127 1.3e-34 149.8 96 67.7
TAR375G0281 Trochodendron aralioides HOM05D005885 ORTHO05D008127 1.3e-34 149.8 93 72.0
TAR375G0948 Trochodendron aralioides HOM05D005885 ORTHO05D008127 1.3e-34 149.8 93 72.0
MSTRG.25552 Avicennia marina HOM05D005885 ORTHO05D008127 1.7e-34 149.4 93 72.0
arahy.Tifrunner.gnm1.ann1.FFRS2J Arachis hypogaea HOM05D005885 ORTHO05D008127 2.2e-34 149.1 93 72.0
arahy.Tifrunner.gnm1.ann1.J86H7Q Arachis hypogaea HOM05D005885 ORTHO05D008127 2.2e-34 149.1 93 72.0
Sp1g10970 Schrenkiella parvula HOM05D005885 ORTHO05D008127 3.7e-34 148.3 93 69.9
Eucgr.D01985 Eucalyptus grandis HOM05D005885 ORTHO05D008127 4.8e-34 147.9 93 71.0
MBI04_g35270_MAGBIO Magnolia biondii HOM05D005885 ORTHO05D008127 4.8e-34 147.9 94 70.2
TPR.G19593 Trifolium pratense HOM05D005885 ORTHO05D008127 4.8e-34 147.9 93 69.9
AL1G23690 Arabidopsis lyrata HOM05D005885 ORTHO05D008127 8.2e-34 147.1 93 69.9
FAN04G1127 Fragaria x ananassa HOM05D005885 ORTHO05D008127 8.2e-34 147.1 93 72.0
Nn4g26386 Nelumbo nucifera HOM05D005885 ORTHO05D008127 8.2e-34 147.1 97 68.0
Potri.001G116800 Populus trichocarpa HOM05D005885 ORTHO05D008127 8.2e-34 147.1 93 73.1
Cpa.g.sc29.82 Carica papaya HOM05D005885 ORTHO05D008127 1.1e-33 146.7 93 71.0
FAN13G1573 Fragaria x ananassa HOM05D005885 ORTHO05D008127 1.1e-33 146.7 93 71.0
Lsat_1_v5_gn_6_9740 Lactuca sativa HOM05D005885 ORTHO05D008127 1.1e-33 146.7 97 68.0
Sabra01G0089600 Salix brachista HOM05D005885 ORTHO05D008127 1.1e-33 146.7 93 72.0
Carub.0001s1203 Capsella rubella HOM05D005885 ORTHO05D008127 1.4e-33 146.4 93 68.8
DCAR_008454 Daucus carota HOM05D005885 ORTHO05D008127 1.4e-33 146.4 93 71.0
Hma1.2p1_0138F.1_g063110 Hydrangea macrophylla HOM05D005885 ORTHO05D008127 1.4e-33 146.4 93 73.1
Hma1.2p1_0138F.1_g063120 Hydrangea macrophylla HOM05D005885 ORTHO05D008127 1.4e-33 146.4 93 73.1
Oeu040058.2 Olea europaea HOM05D005885 ORTHO05D008127 1.4e-33 146.4 93 71.0
QL12p015122 Quercus lobata HOM05D005885 ORTHO05D008127 1.4e-33 146.4 93 71.0
CAN.G630.67 Capsicum annuum HOM05D005885 ORTHO05D008127 1.8e-33 146.0 93 69.9
FvH4_5g00790 Fragaria vesca HOM05D005885 ORTHO05D008127 1.8e-33 146.0 93 71.0
Cc08_g13300 Coffea canephora HOM05D005885 ORTHO05D008127 2.4e-33 145.6 93 69.9
MD04G1078900 Malus domestica HOM05D005885 ORTHO05D008127 2.4e-33 145.6 93 69.9
THA.LOC104809442 Tarenaya hassleriana HOM05D005885 ORTHO05D008127 2.4e-33 145.6 93 69.9
Lj8C254T7 Lonicera japonica HOM05D005885 ORTHO05D008127 3.1e-33 145.2 93 71.0
Rhsim07G0193500 Rhododendron simsii HOM05D005885 ORTHO05D008127 3.1e-33 145.2 93 71.0
AT1G12370 Arabidopsis thaliana HOM05D005885 ORTHO05D008127 4.1e-33 144.8 93 67.7
ClCG01G003610 Citrullus lanatus HOM05D005885 ORTHO05D008127 4.1e-33 144.8 93 68.8
MELO3C005584.2 Cucumis melo HOM05D005885 ORTHO05D008127 4.1e-33 144.8 93 68.8
CsaV3_5G003710 Cucumis sativus L. HOM05D005885 ORTHO05D008127 4.1e-33 144.8 93 68.8
Ah.02g116190 Amaranthus hybridus HOM05D005885 ORTHO05D008127 5.3e-33 144.4 93 68.8
GSVIVG01004905001 Vitis vinifera HOM05D005885 ORTHO05D008127 5.3e-33 144.4 93 68.8
CANSAT21G1830 Cannabis sativa HOM05D005885 ORTHO05D008127 7.0e-33 144.1 93 68.8
CARHR012660 Cardamine hirsuta HOM05D005885 ORTHO05D008127 7.0e-33 144.1 93 68.8
Thhalv10007458m.g Eutrema salsugineum HOM05D005885 ORTHO05D008127 7.0e-33 144.1 93 67.7
Lj2g0010887 Lotus japonicus HOM05D005885 ORTHO05D008127 7.0e-33 144.1 93 71.0
PGR031G0042 Punica granatum HOM05D005885 ORTHO05D008127 7.0e-33 144.1 93 69.9
C08p15390 Brassica napus HOM05D005885 ORTHO05D008127 9.1e-33 143.7 93 66.7
BolC8t49167H Brassica oleracea HOM05D005885 ORTHO05D008127 9.1e-33 143.7 93 66.7
CiPaw.11G147000 Carya illinoinensis HOM05D005885 ORTHO05D008127 9.1e-33 143.7 105 63.8
Migut.A00839 Erythranthe guttata HOM05D005885 ORTHO05D008127 9.1e-33 143.7 93 67.7
Manes.01G072400 Manihot esculenta HOM05D005885 ORTHO05D008127 9.1e-33 143.7 93 69.9
RcHm_v2.0_Chr7g0201341 Rosa chinensis HOM05D005885 ORTHO05D008127 9.1e-33 143.7 93 69.9
A08p32870 Brassica napus HOM05D005885 ORTHO05D008127 1.2e-32 143.3 93 65.6
CSS0003633 Camellia sinensis var. sinensis HOM05D005885 ORTHO05D008127 1.5e-32 142.9 93 71.0
vmacro00223 Vaccinium macrocarpon HOM05D005885 ORTHO05D008127 1.5e-32 142.9 93 71.0
Haze_09046 Corylus avellana HOM05D005885 ORTHO05D008127 2.0e-32 142.5 93 69.9
EL10Ac5g12625 Beta vulgaris HOM05D005885 ORTHO05D008127 3.5e-32 141.7 93 68.8
BraA08t35209Z Brassica rapa HOM05D005885 ORTHO05D008127 3.5e-32 141.7 93 65.6
ECA233G5871 Erigeron canadensis HOM05D005885 ORTHO05D008127 3.5e-32 141.7 94 67.0
PSO478G5024 Papaver somniferum HOM05D005885 ORTHO05D008127 3.5e-32 141.7 93 66.7
Prupe.5G080300 Prunus persica HOM05D005885 ORTHO05D008127 3.5e-32 141.7 93 68.8
Sed0024879 Sechium edule HOM05D005885 ORTHO05D008127 3.5e-32 141.7 93 68.8
Hund11561 Selenicereus undatus HOM05D005885 ORTHO05D008127 5.9e-32 141.0 93 67.7
Sc07g0009420 Simmondsia chinensis HOM05D005885 ORTHO05D008127 5.9e-32 141.0 93 69.9
SGA_v2.0_scaffold120G32808 Striga asiatica HOM05D005885 ORTHO05D008127 5.9e-32 141.0 97 64.9
FAN08G2136 Fragaria x ananassa HOM05D005885 ORTHO05D000042 7.7e-32 140.6 93 68.8
PGSC0003DMG400003932 Solanum tuberosum HOM05D005885 ORTHO05D008127 7.7e-32 140.6 93 67.7
TWI81G1092 Tripterygium wilfordii HOM05D005885 ORTHO05D008127 7.7e-32 140.6 93 67.7
Cfa012022 Carpinus fangiana HOM05D005885 ORTHO05D008127 1.0e-31 140.2 93 68.8
CDE12G0141 Ceratophyllum demersum HOM05D005885 ORTHO05D008127 1.0e-31 140.2 93 66.7
SalBow6G1575 Salvia bowleyana HOM05D005885 ORTHO05D008127 1.0e-31 140.2 93 67.7
HPP92_020977 Vanilla planifolia HOM05D005885 ORTHO05D008127 1.0e-31 140.2 92 68.5
Nitab4.5_0010237g0040 Nicotiana tabacum HOM05D005885 ORTHO05D008127 1.7e-31 139.4 93 67.7
Solyc08g079530.3 Solanum lycopersicum HOM05D005885 ORTHO05D008127 1.7e-31 139.4 93 66.7
Sopen08g027900 Solanum pennellii HOM05D005885 ORTHO05D008127 1.7e-31 139.4 93 66.7
AUR62017386 Chenopodium quinoa HOM05D005885 ORTHO05D008127 2.2e-31 139.0 93 67.7
SEGI_07453 Sequoiadendron giganteum HOM05D005885 ORTHO05D008127 2.9e-31 138.7 93 66.7
Atru.chr9.1440 Acer truncatum HOM05D005885 ORTHO05D008127 3.8e-31 138.3 93 66.7
ATR0810G103 Amborella trichopoda HOM05D005885 ORTHO05D008127 3.8e-31 138.3 97 66.0
HanXRQChr07g0188641 Helianthus annuus HOM05D005885 ORTHO05D008127 5.0e-31 137.9 94 68.1
Dinv37758 Davidia involucrata HOM05D005885 ORTHO05D008127 6.5e-31 137.5 93 66.7
Gohir.D03G158300 Gossypium hirsutum HOM05D005885 ORTHO05D008127 8.5e-31 137.1 93 65.6
Gorai.003G166800 Gossypium raimondii HOM05D005885 ORTHO05D008127 8.5e-31 137.1 93 65.6
Os10g0167600 Oryza sativa ssp. japonica HOM05D005885 ORTHO05D008127 8.5e-31 137.1 93 63.4
COL.COLO4_23868 Corchorus olitorius HOM05D005885 ORTHO05D008127 1.1e-30 136.7 93 65.6
Peaxi162Scf00271g00133 Petunia axillaris HOM05D005885 ORTHO05D008127 1.5e-30 136.3 93 66.7
unitig_744.g24322 Utricularia gibba HOM05D005885 ORTHO05D008127 1.5e-30 136.3 90 67.8
ECA233G1449 Erigeron canadensis HOM05D005885 ORTHO05D008127 2.5e-30 135.6 93 64.5
FAN18G2769 Fragaria x ananassa HOM05D005885 ORTHO05D000042 2.5e-30 135.6 89 70.8
Gohir.A03G011600 Gossypium hirsutum HOM05D005885 ORTHO05D008127 2.5e-30 135.6 93 65.6
Thecc.03G262500 Theobroma cacao HOM05D005885 ORTHO05D008127 4.2e-30 134.8 93 64.5
Ciclev10019819m.g Citrus clementina HOM05D005885 ORTHO05D008127 7.2e-30 134.0 102 62.7
Duzib205G0406 Durio zibethinus HOM05D005885 ORTHO05D008127 7.2e-30 134.0 93 65.6
Zm00001eb026960 Zea mays HOM05D005885 ORTHO05D008127 1.6e-29 132.9 93 62.4
CBR_g17934 Chara braunii HOM05D005885 ORTHO05D008127 4.7e-29 131.3 107 58.9
AagrBONN_evm.TU.Sc2ySwM_117.35 Anthoceros agrestis HOM05D005885 ORTHO05D008127 6.1e-29 131.0 93 60.2
SMO137G0163 Selaginella moellendorffii HOM05D005885 ORTHO05D008127 1.4e-28 129.8 97 57.7
Nitab4.5_0003534g0090 Nicotiana tabacum HOM05D005885 ORTHO05D008127 6.3e-26 120.9 129 48.8
MCO16G424 Micromonas commoda HOM05D005885 ORTHO05D008127 8.2e-26 120.6 86 65.1
Pp3c5_3400 Physcomitrium patens HOM05D005885 ORTHO05D008127 8.2e-26 120.6 88 61.4
MCO01G340 Micromonas commoda HOM05D005885 ORTHO05D008127 5.9e-24 114.4 91 60.4
Actinidia02084 Actinidia chinensis HOM05D005885 ORTHO05D008127 1.0e-23 113.6 88 60.2
Mapoly0149s0026 Marchantia polymorpha HOM05D005885 ORTHO05D008127 2.2e-23 112.5 94 51.1
Cre12.g533000 Chlamydomonas reinhardtii HOM05D005885 ORTHO05D008127 2.5e-22 109.0 90 54.4
PRCOL_00005710 Prasinoderma coloniale HOM05D005885 ORTHO05D008127 3.0e-20 102.1 93 51.6
Haze_26274 Corylus avellana HOM05D005885 ORTHO05D008127 3.7e-18 95.1 95 46.3
Actinidia14469 Actinidia chinensis HOM05D005885 ORTHO05D008127 2.4e-17 92.4 62 62.9
Glyma.01G212300 Glycine max HOM05D005885 ORTHO05D008127 3.1e-17 92.0 45 86.7
MCO05G034 Micromonas commoda HOM05D005885 ORTHO05D268017 9.4e-14 80.5 101 42.6
PSO782G2305 Papaver somniferum HOM05D005885 ORTHO05D008127 8.0e-13 77.4 93 44.1
QL09p013714 Quercus lobata HOM05D005885 ORTHO05D008127 1.3e-10 70.1 45 64.4
Cre02.g118000 Chlamydomonas reinhardtii HOM05D005885 ORTHO05D044175 2.5e-06 55.8 96 37.5
COL.COLO4_29220 Corchorus olitorius HOM05D005885 ORTHO05D008127 5.5e-06 54.7 39 69.2


User provided reference genes

Program Settings