Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.001G093800 Phaseolus vulgaris HOM05D005515 ORTHO05D006620 2.3e-44 182.2 115 100.0
Glyma.16G056700 Glycine max HOM05D005515 ORTHO05D006620 5.3e-41 171.0 115 92.2
Glyma.19G091000 Glycine max HOM05D005515 ORTHO05D006620 1.2e-40 169.9 115 90.4
Lj1g0017105 Lotus japonicus HOM05D005515 ORTHO05D006620 1.7e-39 166.0 114 90.4
Lalb_Chr22g0360381 Lupinus albus HOM05D005515 ORTHO05D006620 1.7e-39 166.0 115 90.4
Psat3g175680 Pisum sativum HOM05D005515 ORTHO05D006620 4.2e-38 161.4 115 72.2
TPR.G38294 Trifolium pratense HOM05D005515 ORTHO05D006620 1.2e-37 159.8 115 70.4
Medtr7g033490 Medicago truncatula HOM05D005515 ORTHO05D006620 8.7e-36 153.7 115 73.0
MD09G1011100 Malus domestica HOM05D005515 ORTHO05D006620 4.8e-34 147.9 110 79.1
Dinv25661 Davidia involucrata HOM05D005515 ORTHO05D006620 6.2e-34 147.5 113 77.0
CiPaw.04G036400 Carya illinoinensis HOM05D005515 ORTHO05D006620 1.4e-33 146.4 113 69.0
Haze_14873 Corylus avellana HOM05D005515 ORTHO05D006620 1.4e-33 146.4 113 72.6
Sc07g0003980 Simmondsia chinensis HOM05D005515 ORTHO05D006620 3.1e-33 145.2 113 82.3
Prupe.3G305900 Prunus persica HOM05D005515 ORTHO05D006620 5.3e-33 144.4 113 83.2
CANSAT11G1216 Cannabis sativa HOM05D005515 ORTHO05D006620 1.2e-32 143.3 113 76.1
Eucgr.I01648 Eucalyptus grandis HOM05D005515 ORTHO05D006620 1.0e-31 140.2 109 81.7
Potri.001G330400 Populus trichocarpa HOM05D005515 ORTHO05D006620 1.0e-31 140.2 113 73.5
FAN09G0415 Fragaria x ananassa HOM05D005515 ORTHO05D006620 1.7e-31 139.4 114 78.9
FvH4_6g53480 Fragaria vesca HOM05D005515 ORTHO05D006620 2.9e-31 138.7 113 73.5
Gohir.A05G338800 Gossypium hirsutum HOM05D005515 ORTHO05D006620 2.9e-31 138.7 113 81.4
FAN05G2195 Fragaria x ananassa HOM05D005515 ORTHO05D006620 4.9e-31 137.9 112 79.5
GSVIVG01033096001 Vitis vinifera HOM05D005515 ORTHO05D006620 6.5e-31 137.5 114 78.9
Aqoxy5G03385 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 8.4e-31 137.1 113 79.6
Ciclev10017250m.g Citrus clementina HOM05D005515 ORTHO05D006620 8.4e-31 137.1 113 78.8
HPP92_000347 Vanilla planifolia HOM05D005515 ORTHO05D006620 1.1e-30 136.7 112 78.6
Zm00001eb364510 Zea mays HOM05D005515 ORTHO05D006620 1.4e-30 136.3 112 61.6
Aqoxy7G00951 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 1.9e-30 136.0 112 80.4
Rhsim10G0006500 Rhododendron simsii HOM05D005515 ORTHO05D006620 2.5e-30 135.6 108 79.6
TAR374G0204 Trochodendron aralioides HOM05D005515 ORTHO05D006620 2.5e-30 135.6 115 79.1
Cc11_g16850 Coffea canephora HOM05D005515 ORTHO05D006620 3.2e-30 135.2 113 75.2
Oeu041666.1 Olea europaea HOM05D005515 ORTHO05D006620 3.2e-30 135.2 113 78.8
SEGI_35944 Sequoiadendron giganteum HOM05D005515 ORTHO05D006620 4.2e-30 134.8 114 77.2
Aqoxy2G02223 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 5.5e-30 134.4 112 79.5
Potri.017G069200 Populus trichocarpa HOM05D005515 ORTHO05D006620 5.5e-30 134.4 116 76.7
Gohir.D07G235400 Gossypium hirsutum HOM05D005515 ORTHO05D006620 7.1e-30 134.0 113 78.8
Manes.15G160700 Manihot esculenta HOM05D005515 ORTHO05D006620 7.1e-30 134.0 113 77.9
TAR622G0361 Trochodendron aralioides HOM05D005515 ORTHO05D006620 7.1e-30 134.0 113 79.6
Dinv10962 Davidia involucrata HOM05D000504 ORTHO05D006620 2.1e-29 132.5 111 79.3
Gorai.001G271200 Gossypium raimondii HOM05D005515 ORTHO05D006620 2.7e-29 132.1 113 78.8
Lsat_1_v5_gn_8_147620 Lactuca sativa HOM05D005515 ORTHO05D006620 4.6e-29 131.3 113 73.5
Os01g0920200 Oryza sativa ssp. japonica HOM05D005515 ORTHO05D006620 6.0e-29 131.0 109 72.5
Atru.chr11.2315 Acer truncatum HOM05D005515 ORTHO05D006620 7.9e-29 130.6 109 77.1
Atru.chr6.2567 Acer truncatum HOM05D005515 ORTHO05D006620 7.9e-29 130.6 114 76.3
FAN02G1022 Fragaria x ananassa HOM05D005515 ORTHO05D006620 7.9e-29 130.6 113 72.6
Gohir.D04G077100 Gossypium hirsutum HOM05D005515 ORTHO05D006620 7.9e-29 130.6 113 78.8
CSS0007323 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 1.0e-28 130.2 111 62.2
Gohir.A07G228200 Gossypium hirsutum HOM05D005515 ORTHO05D006620 1.3e-28 129.8 113 77.9
AUR62017824 Chenopodium quinoa HOM05D005515 ORTHO05D006620 3.0e-28 128.6 113 61.9
TWI36G0725 Tripterygium wilfordii HOM05D005515 ORTHO05D006620 3.0e-28 128.6 115 76.5
Gorai.012G087000 Gossypium raimondii HOM05D005515 ORTHO05D006620 3.9e-28 128.3 112 78.6
Nitab4.5_0003376g0030 Nicotiana tabacum HOM05D005515 ORTHO05D006620 5.1e-28 127.9 113 77.0
Nitab4.5_0008640g0020 Nicotiana tabacum HOM05D005515 ORTHO05D006620 5.1e-28 127.9 113 77.0
Mapoly0005s0063 Marchantia polymorpha HOM05D005515 ORTHO05D006620 8.7e-28 127.1 113 76.1
EL10Ac6g15358 Beta vulgaris HOM05D005515 ORTHO05D006620 1.1e-27 126.7 113 60.2
arahy.Tifrunner.gnm1.ann1.W7YL8X Arachis hypogaea HOM05D005515 ORTHO05D006620 1.5e-27 126.3 114 76.3
arahy.Tifrunner.gnm1.ann1.Y4DWZG Arachis hypogaea HOM05D005515 ORTHO05D006620 1.5e-27 126.3 114 76.3
CsaV3_6G032220 Cucumis sativus L. HOM05D005515 ORTHO05D006620 2.5e-27 125.6 113 70.8
Duzib147G1212 Durio zibethinus HOM05D005515 ORTHO05D006620 2.5e-27 125.6 113 74.3
PSO063G5856 Papaver somniferum HOM05D005515 ORTHO05D006620 2.5e-27 125.6 113 75.2
PSO782G3173 Papaver somniferum HOM05D005515 ORTHO05D006620 2.5e-27 125.6 113 75.2
Peaxi162Scf00881g00228 Petunia axillaris HOM05D005515 ORTHO05D006620 2.5e-27 125.6 110 78.2
Thecc.04G035700 Theobroma cacao HOM05D005515 ORTHO05D006620 2.5e-27 125.6 113 75.2
Sed0013471 Sechium edule HOM05D005515 ORTHO05D006620 4.3e-27 124.8 112 60.7
Pp3c4_1860 Physcomitrium patens HOM05D005515 ORTHO05D006620 5.7e-27 124.4 109 76.1
Pp3c12_14240 Physcomitrium patens HOM05D005515 ORTHO05D006620 7.4e-27 124.0 109 75.2
CAN.G1300.5 Capsicum annuum HOM05D005515 ORTHO05D006620 9.6e-27 123.6 110 77.3
Duzib264G0697 Durio zibethinus HOM05D005515 ORTHO05D006620 1.3e-26 123.2 113 74.3
Solyc02g068110.4 Solanum lycopersicum HOM05D005515 ORTHO05D006620 1.6e-26 122.9 113 73.5
Duzib187G1157 Durio zibethinus HOM05D005515 ORTHO05D006620 4.8e-26 121.3 113 75.2
Migut.K01462 Erythranthe guttata HOM05D005515 ORTHO05D006620 4.8e-26 121.3 113 69.9
ATR1098G146 Amborella trichopoda HOM05D005515 ORTHO05D006620 6.3e-26 120.9 123 69.9
Actinidia05921 Actinidia chinensis HOM05D005515 ORTHO05D006620 1.8e-25 119.4 110 60.9
AL5G16230 Arabidopsis lyrata HOM05D005515 ORTHO05D006620 1.8e-25 119.4 115 72.2
Pp3c8_2660 Physcomitrium patens HOM05D005515 ORTHO05D006620 2.4e-25 119.0 111 60.4
Zm00001eb143260 Zea mays HOM05D005515 ORTHO05D006620 2.4e-25 119.0 109 55.0
Manes.12G012000 Manihot esculenta HOM05D005515 ORTHO05D006620 4.1e-25 118.2 111 73.9
Hund04339 Selenicereus undatus HOM05D005515 ORTHO05D006620 4.1e-25 118.2 113 68.1
PGR102G1194 Punica granatum HOM05D005515 ORTHO05D006620 2.0e-24 115.9 113 68.1
Duzib268G1731 Durio zibethinus HOM05D005515 ORTHO05D006620 2.6e-24 115.5 115 56.5
CARHR148320 Cardamine hirsuta HOM05D005515 ORTHO05D006620 5.9e-24 114.4 115 64.3
MSTRG.15568 Avicennia marina HOM05D005515 ORTHO05D006620 1.0e-23 113.6 116 66.4
THA.LOC104823981 Tarenaya hassleriana HOM05D005515 ORTHO05D006620 6.5e-23 110.9 113 69.9
MD00G1139400 Malus domestica HOM05D005515 ORTHO05D006620 3.2e-22 108.6 103 57.3
Gohir.A05G310700 Gossypium hirsutum HOM05D005515 ORTHO05D006620 7.2e-22 107.5 117 52.1
Gorai.009G332600 Gossypium raimondii HOM05D005515 ORTHO05D006620 1.2e-21 106.7 112 54.5
Migut.K00729 Erythranthe guttata HOM05D005515 ORTHO05D006620 4.6e-21 104.8 113 48.7
SMO367G0376 Selaginella moellendorffii HOM05D005515 ORTHO05D006620 7.9e-21 104.0 110 64.5
Sabra16G0211700 Salix brachista HOM05D005515 ORTHO05D006620 1.3e-20 103.2 204 43.1
Carub.0005s0534 Capsella rubella HOM05D005515 ORTHO05D006620 8.7e-20 100.5 117 65.0
unitig_8.g2909 Utricularia gibba HOM05D005515 ORTHO05D006620 8.7e-20 100.5 112 67.9
QL02p071462 Quercus lobata HOM05D005515 ORTHO05D006620 1.9e-19 99.4 87 62.1
MSTRG.7999 Avicennia marina HOM05D005515 ORTHO05D006620 3.3e-19 98.6 111 64.0
VMungo1383G1573 Vigna mungo HOM05D005515 ORTHO05D006620 3.3e-19 98.6 132 50.0
RcHm_v2.0_Chr2g0175521 Rosa chinensis HOM05D005515 ORTHO05D006620 4.3e-19 98.2 88 60.2
Cfa009365 Carpinus fangiana HOM05D000048 ORTHO05D000445 5.7e-19 97.8 113 62.8
FAN14G0031 Fragaria x ananassa HOM05D005515 ORTHO05D006620 5.7e-19 97.8 88 68.2
Ciclev10033394m.g Citrus clementina HOM05D005515 ORTHO05D006620 9.7e-19 97.1 87 74.7
MELO3C011459.2 Cucumis melo HOM05D005515 ORTHO05D006620 9.7e-19 97.1 83 73.5
Cpa.g.sc43.50 Carica papaya HOM05D005515 ORTHO05D006620 1.6e-18 96.3 88 73.9
A09p03280 Brassica napus HOM05D005515 ORTHO05D006620 4.8e-18 94.7 115 66.1
Sopen02g017220 Solanum pennellii HOM05D005515 ORTHO05D006620 6.3e-18 94.4 88 56.8
vmacro05955 Vaccinium macrocarpon HOM05D005515 ORTHO05D006620 8.2e-18 94.0 86 58.1
AT3G27100 Arabidopsis thaliana HOM05D005515 ORTHO05D006620 1.4e-17 93.2 116 61.2
BcaC04g23917 Brassica carinata HOM05D005515 ORTHO05D006620 1.8e-17 92.8 114 65.8
BolC9t53269H Brassica oleracea HOM05D005515 ORTHO05D006620 1.8e-17 92.8 114 65.8
Haze_12412 Corylus avellana HOM05D000048 ORTHO05D000445 1.8e-17 92.8 115 47.8
CSS0037273 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 2.4e-17 92.4 86 59.3
Sabra17G0064300 Salix brachista HOM05D005515 ORTHO05D006620 5.3e-17 91.3 116 56.0
PGSC0003DMG401006926 Solanum tuberosum HOM05D005515 ORTHO05D006620 6.9e-17 90.9 90 72.2
Actinidia36201 Actinidia chinensis HOM05D005515 ORTHO05D006620 9.0e-17 90.5 84 65.5
Nn3g16471 Nelumbo nucifera HOM05D005515 ORTHO05D006620 2.0e-16 89.4 90 71.1
AagrBONN_evm.TU.Sc2ySwM_117.47 Anthoceros agrestis HOM05D005515 ORTHO05D006620 2.6e-16 89.0 84 56.0
HanXRQChr12g0385431 Helianthus annuus HOM05D005515 ORTHO05D006620 2.6e-16 89.0 55 78.2
Sp2g16230 Schrenkiella parvula HOM05D005515 ORTHO05D006620 2.6e-16 89.0 112 63.4
Thhalv10005161m.g Eutrema salsugineum HOM05D005515 ORTHO05D006620 3.4e-16 88.6 113 60.2
BolC7t44132H Brassica oleracea HOM05D005515 ORTHO05D006620 1.7e-15 86.3 110 55.5
Aa31LG2G5500 Aethionema arabicum HOM05D005515 ORTHO05D006620 1.4e-14 83.2 115 57.4
SalBow2G3427 Salvia bowleyana HOM05D005515 ORTHO05D006620 2.5e-14 82.4 86 51.2
SGA_v2.0_scaffold154G37170 Striga asiatica HOM05D005515 ORTHO05D006620 2.5e-14 82.4 115 57.4
Ah.02g120510 Amaranthus hybridus HOM05D005515 ORTHO05D006620 1.2e-13 80.1 73 54.8
SalBow7G1491 Salvia bowleyana HOM05D005515 ORTHO05D006620 1.6e-13 79.7 111 46.8
BraA06t27074Z Brassica rapa HOM05D005515 ORTHO05D006620 4.6e-13 78.2 113 57.5
CDE02G3365 Ceratophyllum demersum HOM05D005515 ORTHO05D006620 7.9e-13 77.4 84 69.0
C09p03480 Brassica napus HOM05D005515 ORTHO05D006620 1.0e-12 77.0 88 48.9
Gohir.D05G311500 Gossypium hirsutum HOM05D005515 ORTHO05D006620 5.1e-12 74.7 89 49.4
C07p36160 Brassica napus HOM05D005515 ORTHO05D006620 8.8e-12 73.9 111 56.8
A06p41490 Brassica napus HOM05D005515 ORTHO05D006620 5.7e-11 71.2 116 56.0
MCO13G114 Micromonas commoda HOM05D005515 ORTHO05D006620 7.4e-11 70.9 87 63.2
Actinidia30652 Actinidia chinensis HOM05D005515 ORTHO05D006620 3.1e-09 65.5 60 56.7
BcaB04g19426 Brassica carinata HOM05D005515 ORTHO05D006620 4.1e-09 65.1 82 57.3
BraA09t35966Z Brassica rapa HOM05D005515 ORTHO05D006620 9.1e-09 63.9 109 57.8
COL.COLO4_20393 Corchorus olitorius HOM05D005515 ORTHO05D006620 1.2e-08 63.5 57 57.9
Oeu006531.1 Olea europaea HOM05D005515 ORTHO05D006620 5.9e-08 61.2 61 52.5
Cre08.g370300 Chlamydomonas reinhardtii HOM05D005515 ORTHO05D006620 1.3e-07 60.1 89 36.0
CSS0003202 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 2.9e-07 58.9 51 60.8
CSS0037049 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 2.9e-07 58.9 51 60.8
PRCOL_00000741 Prasinoderma coloniale HOM05D005515 ORTHO05D006620 3.8e-07 58.5 89 37.1
Haze_27757 Corylus avellana HOM05D005515 ORTHO05D006620 3.2e-06 55.5 89 33.7


User provided reference genes

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