Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Peaxi162Scf00024g02012 Petunia axillaris HOM05D000155 ORTHO05D000022 2.2e-81 305.4 142 100.0
Nitab4.5_0005029g0020 Nicotiana tabacum HOM05D011511 ORTHO05D000022 7.0e-27 124.4 124 46.0
Nitab4.5_0000512g0090 Nicotiana tabacum HOM05D011511 ORTHO05D000022 4.5e-26 121.7 128 43.0
Sopen07g021380 Solanum pennellii HOM05D000155 ORTHO05D000034 1.0e-25 120.6 132 44.7
Nitab4.5_0008471g0050 Nicotiana tabacum HOM05D011511 ORTHO05D000022 2.7e-23 112.5 128 43.0
Cc03_g15170 Coffea canephora HOM05D000025 ORTHO05D000022 1.2e-21 107.1 128 35.2
Nitab4.5_0006480g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.3e-20 103.6 126 38.9
Cc00_g20180 Coffea canephora HOM05D000155 ORTHO05D000022 1.7e-20 103.2 131 38.2
Cc00_g15230 Coffea canephora HOM05D000155 ORTHO05D000022 2.0e-18 96.3 128 33.6
Cc00_g21050 Coffea canephora HOM05D000155 ORTHO05D000022 2.0e-18 96.3 128 33.6
Cc00_g24940 Coffea canephora HOM05D000155 ORTHO05D000022 2.0e-18 96.3 128 33.6
Cc06_g22510 Coffea canephora HOM05D000155 ORTHO05D000022 2.0e-18 96.3 128 33.6
Sopen00g003390 Solanum pennellii HOM05D000003 ORTHO05D000004 3.8e-17 92.0 130 34.6
PGSC0003DMG400045895 Solanum tuberosum HOM05D000155 ORTHO05D000022 6.5e-17 91.3 129 32.6
Nitab4.5_0008964g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.5e-16 89.4 91 46.2
PGSC0003DMG400046872 Solanum tuberosum HOM05D000003 ORTHO05D000022 3.3e-16 89.0 131 30.5
Cc00_g03270 Coffea canephora HOM05D000155 ORTHO05D000022 2.1e-15 86.3 126 38.1
PGSC0003DMG402031434 Solanum tuberosum HOM05D000003 ORTHO05D000004 2.1e-15 86.3 129 31.8
Nitab4.5_0000249g0360 Nicotiana tabacum HOM05D009916 ORTHO05D000022 2.8e-15 85.9 128 32.8
Nitab4.5_0000023g0150 Nicotiana tabacum HOM05D000155 ORTHO05D000022 4.7e-15 85.1 95 40.0
PGSC0003DMG400040103 Solanum tuberosum HOM05D000003 ORTHO05D000022 8.0e-15 84.3 131 32.1
Sopen01g005170 Solanum pennellii HOM05D000155 ORTHO05D000022 1.0e-14 84.0 128 35.9
Sopen11g024980 Solanum pennellii HOM05D011511 ORTHO05D000022 1.0e-14 84.0 116 38.8
Sopen06g007150 Solanum pennellii HOM05D000003 ORTHO05D000004 1.8e-14 83.2 129 31.0
PGSC0003DMG400021434 Solanum tuberosum HOM05D001426 ORTHO05D000022 2.3e-14 82.8 128 33.6
Sopen00g001090 Solanum pennellii HOM05D000003 ORTHO05D000004 5.2e-14 81.6 131 32.1
Sopen09g012310 Solanum pennellii HOM05D000003 ORTHO05D000004 5.2e-14 81.6 129 31.0
Sopen11g008140 Solanum pennellii HOM05D000024 ORTHO05D000022 5.2e-14 81.6 131 32.1
Sopen08g015240 Solanum pennellii HOM05D000003 ORTHO05D000004 8.9e-14 80.9 130 32.3
PGSC0003DMG401009742 Solanum tuberosum HOM05D001426 ORTHO05D001389 8.9e-14 80.9 128 31.2
PGSC0003DMG400037811 Solanum tuberosum HOM05D000155 ORTHO05D000022 1.2e-13 80.5 127 29.9
MBI15_g44989_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.0e-13 79.7 112 35.7
Peaxi162Scf00552g00012 Petunia axillaris HOM05D001426 ORTHO05D001389 3.4e-13 79.0 128 31.2
Sopen00g012040 Solanum pennellii HOM05D000003 ORTHO05D000004 3.4e-13 79.0 113 30.1
Sopen04g014310 Solanum pennellii HOM05D000155 ORTHO05D000022 4.4e-13 78.6 127 30.7
Peaxi162Scf00056g00119 Petunia axillaris HOM05D001426 ORTHO05D001389 7.5e-13 77.8 100 34.0
Peaxi162Scf00492g00016 Petunia axillaris HOM05D001426 ORTHO05D001389 9.8e-13 77.4 117 31.6
Lj7P241T13 Lonicera japonica HOM05D000155 ORTHO05D000022 2.2e-12 76.3 128 30.5
Sopen09g009790 Solanum pennellii HOM05D000155 ORTHO05D000022 2.8e-12 75.9 127 29.9
Peaxi162Scf00059g00130 Petunia axillaris HOM05D001426 ORTHO05D001389 3.7e-12 75.5 108 33.3
Sopen08g015180 Solanum pennellii HOM05D000003 ORTHO05D000004 4.9e-12 75.1 130 30.0
Sopen09g015010 Solanum pennellii HOM05D000003 ORTHO05D000022 4.9e-12 75.1 130 30.8
TAR014G0002 Trochodendron aralioides HOM05D000155 ORTHO05D000022 4.9e-12 75.1 129 29.5
Peaxi162Scf00160g01638 Petunia axillaris HOM05D000155 ORTHO05D000022 6.3e-12 74.7 50 62.0
Nitab4.5_0007685g0030 Nicotiana tabacum HOM05D012063 ORTHO05D036866 1.1e-11 73.9 100 37.0
Nitab4.5_0007662g0020 Nicotiana tabacum HOM05D000801 ORTHO05D001389 1.4e-11 73.6 125 31.2
MBI15_g07207_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.4e-11 72.8 114 31.6
PGSC0003DMG400015911 Solanum tuberosum HOM05D000003 ORTHO05D001389 4.1e-11 72.0 109 30.3
PGSC0003DMG400008628 Solanum tuberosum HOM05D000155 ORTHO05D000022 5.4e-11 71.6 108 32.4
MBI15_g44988_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 7.0e-11 71.2 112 30.4
Sopen02g039300 Solanum pennellii HOM05D000003 ORTHO05D000004 7.0e-11 71.2 118 28.0
MBI13_g30119_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.2e-10 70.5 114 34.2
Peaxi162Scf00172g00144 Petunia axillaris HOM05D001426 ORTHO05D001389 1.2e-10 70.5 81 35.8
Sopen01g026920 Solanum pennellii HOM05D000003 ORTHO05D000022 2.0e-10 69.7 130 30.8
Peaxi162Scf00872g00111 Petunia axillaris HOM05D001426 ORTHO05D001389 3.5e-10 68.9 80 33.8
Cc00_g07050 Coffea canephora HOM05D000003 ORTHO05D000004 4.5e-10 68.6 105 35.2
MBI01_g27612_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 5.9e-10 68.2 134 29.9
Sopen03g008140 Solanum pennellii HOM05D000014 ORTHO05D000016 5.9e-10 68.2 130 26.9
Sopen06g003730 Solanum pennellii HOM05D000155 ORTHO05D000022 7.8e-10 67.8 127 27.6
Sopen11g015660 Solanum pennellii HOM05D000003 ORTHO05D023159 7.8e-10 67.8 130 27.7
MBI01_g02771_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.3e-09 67.0 132 30.3
Peaxi162Scf00131g01713 Petunia axillaris HOM05D001426 ORTHO05D001389 1.3e-09 67.0 95 33.7
Nitab4.5_0005970g0030 Nicotiana tabacum HOM05D000032 ORTHO05D006669 1.7e-09 66.6 110 30.0
Nitab4.5_0000210g0100 Nicotiana tabacum HOM05D001454 ORTHO05D001389 2.3e-09 66.2 97 33.0
MBI16_g06664_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000022 2.9e-09 65.9 131 29.8
PGSC0003DMG400007590 Solanum tuberosum HOM05D001426 ORTHO05D001389 2.9e-09 65.9 78 39.7
PGSC0003DMG400012502 Solanum tuberosum HOM05D000003 ORTHO05D000004 2.9e-09 65.9 128 27.3
PGSC0003DMG400023605 Solanum tuberosum HOM05D000003 ORTHO05D000004 2.9e-09 65.9 128 27.3
Nitab4.5_0000031g0460 Nicotiana tabacum HOM05D009916 ORTHO05D000022 3.8e-09 65.5 74 41.9
Peaxi162Scf00938g00016 Petunia axillaris HOM05D001426 ORTHO05D001389 3.8e-09 65.5 63 41.3
PGSC0003DMG400035792 Solanum tuberosum HOM05D000155 ORTHO05D000022 3.8e-09 65.5 105 26.7
Lj6P673T55 Lonicera japonica HOM05D000155 ORTHO05D000022 5.0e-09 65.1 107 34.6
Lj9P673T29 Lonicera japonica HOM05D000155 ORTHO05D000022 5.0e-09 65.1 99 30.3
MBI05_g22875_MAGBIO Magnolia biondii HOM05D000038 ORTHO05D000143 5.0e-09 65.1 102 33.3
Lj7P711T40 Lonicera japonica HOM05D000155 ORTHO05D000022 6.6e-09 64.7 107 28.0
MBI15_g26824_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000022 6.6e-09 64.7 135 28.1
Nitab4.5_0000186g0090 Nicotiana tabacum HOM05D001426 ORTHO05D001389 6.6e-09 64.7 93 37.6
Aqoxy3G01731 Aquilegia oxysepala HOM05D000155 ORTHO05D000022 1.1e-08 63.9 123 31.7
Peaxi162Scf00908g00016 Petunia axillaris HOM05D001426 ORTHO05D001389 1.1e-08 63.9 67 37.3
MBI17_g43006_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000022 1.5e-08 63.5 114 28.9
Nitab4.5_0006852g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.5e-08 63.5 59 40.7
Nitab4.5_0000147g0150 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.9e-08 63.2 108 28.7
Hund00002 Selenicereus undatus HOM05D005986 ORTHO05D007467 1.9e-08 63.2 139 33.1
Aqoxy1G03720 Aquilegia oxysepala HOM05D000003 ORTHO05D000022 2.5e-08 62.8 88 34.1
MBI14_g30956_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.5e-08 62.8 136 29.4
MBI16_g37125_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.5e-08 62.8 114 33.3
Nitab4.5_0000061g0260 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.5e-08 62.8 79 34.2
MBI10_g04436_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.3e-08 62.4 113 31.0
MBI08_g18894_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 4.3e-08 62.0 133 27.8
Nn1g09993 Nelumbo nucifera HOM05D000155 ORTHO05D000022 4.3e-08 62.0 103 27.2
Nn1g10094 Nelumbo nucifera HOM05D000155 ORTHO05D000022 4.3e-08 62.0 103 27.2
MBI06_g04398_MAGBIO Magnolia biondii HOM05D001783 ORTHO05D003692 5.6e-08 61.6 118 28.8
MBI18_g13989_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 5.6e-08 61.6 88 34.1
Nitab4.5_0000597g0060 Nicotiana tabacum HOM05D001426 ORTHO05D001389 7.3e-08 61.2 99 34.3
Peaxi162Scf00882g00015 Petunia axillaris HOM05D001426 ORTHO05D001389 7.3e-08 61.2 59 40.7
Sopen11g008050 Solanum pennellii HOM05D000155 ORTHO05D000022 7.3e-08 61.2 130 26.2
Nitab4.5_0000070g0230 Nicotiana tabacum HOM05D001426 ORTHO05D001389 9.5e-08 60.8 90 35.6
TAR400G0001 Trochodendron aralioides HOM05D000155 ORTHO05D000022 1.2e-07 60.5 131 25.2
MBI08_g12695_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.6e-07 60.1 134 24.6
MBI16_g05929_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.1e-07 59.7 114 28.9
Cc11_g02100 Coffea canephora HOM05D000003 ORTHO05D000022 2.8e-07 59.3 84 35.7
Nitab4.5_0000211g0020 Nicotiana tabacum HOM05D001426 ORTHO05D001389 3.6e-07 58.9 90 35.6
Nitab4.5_0000051g0370 Nicotiana tabacum HOM05D001426 ORTHO05D001389 4.7e-07 58.5 105 35.2
SHI53523 Sapria himalayana HOM05D000003 ORTHO05D000004 4.7e-07 58.5 89 37.1
Cc00_g05820 Coffea canephora HOM05D000155 ORTHO05D000022 6.1e-07 58.2 83 36.1
Nitab4.5_0000743g0260 Nicotiana tabacum HOM05D001426 ORTHO05D001389 6.1e-07 58.2 91 29.7
Aqoxy3G02607 Aquilegia oxysepala HOM05D000155 ORTHO05D000022 8.0e-07 57.8 81 33.3
MBI08_g12693_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 8.0e-07 57.8 93 33.3
Nitab4.5_0000153g0160 Nicotiana tabacum HOM05D001426 ORTHO05D001389 8.0e-07 57.8 96 31.2
RcHm_v2.0_Chr2g0160431 Rosa chinensis HOM05D000003 ORTHO05D000004 8.0e-07 57.8 122 31.1
MBI18_g24407_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.0e-06 57.4 70 35.7
TAR598G0001 Trochodendron aralioides HOM05D000155 ORTHO05D000022 1.0e-06 57.4 130 25.4
MBI16_g36774_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.4e-06 57.0 113 31.9
Nitab4.5_0000453g0010 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.4e-06 57.0 114 28.9
Peaxi162Scf00188g00934 Petunia axillaris HOM05D000155 ORTHO05D000022 1.4e-06 57.0 88 39.8
SHI54645 Sapria himalayana HOM05D000003 ORTHO05D000004 1.4e-06 57.0 87 36.8
MBI15_g37533_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000022 1.8e-06 56.6 74 35.1
Nitab4.5_0000034g0120 Nicotiana tabacum HOM05D001454 ORTHO05D001389 1.8e-06 56.6 95 30.5
Nitab4.5_0000262g0100 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.8e-06 56.6 57 42.1
Nitab4.5_0000333g0040 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.3e-06 56.2 108 27.8
RcHm_v2.0_Chr3g0462451 Rosa chinensis HOM05D005989 ORTHO05D000022 2.3e-06 56.2 105 33.3
CiPaw.15G160400 Carya illinoinensis HOM05D000003 ORTHO05D000004 3.0e-06 55.8 109 27.5
Solyc00g500167.1 Solanum lycopersicum HOM05D001426 ORTHO05D001389 3.0e-06 55.8 111 30.6
PSO384G3231 Papaver somniferum HOM05D000003 ORTHO05D000004 4.0e-06 55.5 105 31.4
SHI19423 Sapria himalayana HOM05D000024 ORTHO05D000022 4.0e-06 55.5 83 30.1
Aqoxy5G02155 Aquilegia oxysepala HOM05D000155 ORTHO05D000022 5.2e-06 55.1 109 29.4
Aqoxy5G03038 Aquilegia oxysepala HOM05D000003 ORTHO05D000022 5.2e-06 55.1 109 29.4
Nitab4.5_0002595g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 5.2e-06 55.1 54 42.6
Nitab4.5_0010696g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 5.2e-06 55.1 54 46.3
Peaxi162Scf00005g01613 Petunia axillaris HOM05D001426 ORTHO05D001389 5.2e-06 55.1 81 35.8
Nitab4.5_0001242g0130 Nicotiana tabacum HOM05D043118 ORTHO05D014164 6.8e-06 54.7 72 36.1
RcHm_v2.0_Chr3g0455401 Rosa chinensis HOM05D000003 ORTHO05D000004 8.9e-06 54.3 122 29.5


User provided reference genes

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