Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G4312 Papaver somniferum HOM05D005801 ORTHO05D008555 6.0e-280 967.2 627 100.0
PSO063G7511 Papaver somniferum HOM05D005801 ORTHO05D008555 1.9e-262 909.1 627 91.1
TAR636G1320 Trochodendron aralioides HOM05D005801 ORTHO05D008555 5.4e-148 528.9 684 49.4
Thecc.09G100600 Theobroma cacao HOM05D005801 ORTHO05D008555 1.5e-137 494.2 300 82.0
Cc06_g10480 Coffea canephora HOM05D005801 ORTHO05D008555 7.3e-137 491.9 300 81.7
Duzib150G1339 Durio zibethinus HOM05D005801 ORTHO05D008555 2.8e-136 490.0 300 82.0
Aqoxy7G01401 Aquilegia oxysepala HOM05D005801 ORTHO05D008555 6.2e-136 488.8 303 80.5
CSS0008146 Camellia sinensis var. sinensis HOM05D005801 ORTHO05D008555 6.2e-136 488.8 312 78.5
Prupe.7G219800 Prunus persica HOM05D005801 ORTHO05D008555 1.4e-135 487.6 318 77.4
Oeu053186.1 Olea europaea HOM05D005801 ORTHO05D008555 2.4e-135 486.9 300 81.7
COL.COLO4_34743 Corchorus olitorius HOM05D005801 ORTHO05D008555 3.1e-135 486.5 307 80.1
Duzib132G0722 Durio zibethinus HOM05D005801 ORTHO05D008555 4.0e-135 486.1 297 82.5
Peaxi162Scf00720g00044 Petunia axillaris HOM05D005801 ORTHO05D008555 2.6e-134 483.4 300 79.3
vmacro06253 Vaccinium macrocarpon HOM05D005801 ORTHO05D008555 2.6e-134 483.4 318 77.4
arahy.Tifrunner.gnm1.ann1.BF4XTR Arachis hypogaea HOM05D005801 ORTHO05D008555 2.2e-133 480.3 306 79.7
Gorai.001G010100 Gossypium raimondii HOM05D005801 ORTHO05D008555 6.4e-133 478.8 678 46.5
THA.LOC104814572 Tarenaya hassleriana HOM05D005801 ORTHO05D008555 8.4e-133 478.4 312 75.6
FAN19G1715 Fragaria x ananassa HOM05D005801 ORTHO05D008555 1.1e-132 478.0 308 77.3
Sopen05g014540 Solanum pennellii HOM05D005801 ORTHO05D008555 1.4e-132 477.6 303 79.5
Gohir.D07G009800 Gossypium hirsutum HOM05D005801 ORTHO05D008555 2.4e-132 476.9 671 47.7
CANSAT21G1751 Cannabis sativa HOM05D005801 ORTHO05D008555 4.2e-132 476.1 323 74.0
FvH4_1g06150 Fragaria vesca HOM05D005801 ORTHO05D008555 4.2e-132 476.1 308 76.9
FAN23G0343 Fragaria x ananassa HOM05D005801 ORTHO05D008555 4.2e-132 476.1 308 76.9
QL02p041581 Quercus lobata HOM05D005801 ORTHO05D008555 5.5e-132 475.7 305 77.7
Cfa003179 Carpinus fangiana HOM05D005801 ORTHO05D008555 7.1e-132 475.3 300 78.0
EL10Ac8g18377 Beta vulgaris HOM05D005801 ORTHO05D008555 1.2e-131 474.6 310 77.1
Manes.16G108700 Manihot esculenta HOM05D005801 ORTHO05D008555 1.2e-131 474.6 306 76.8
Nitab4.5_0000066g0110 Nicotiana tabacum HOM05D005801 ORTHO05D008555 1.2e-131 474.6 299 78.9
Rhsim03G0236600 Rhododendron simsii HOM05D005801 ORTHO05D008555 1.2e-131 474.6 310 77.7
PGSC0003DMG400038162 Solanum tuberosum HOM05D005801 ORTHO05D008555 1.2e-131 474.6 303 78.9
TWI63G0976 Tripterygium wilfordii HOM05D005801 ORTHO05D008555 1.6e-131 474.2 300 77.0
Ca_17365_v3 Cicer arietinum L. HOM05D005801 ORTHO05D008555 2.1e-131 473.8 306 77.5
Gohir.A07G009500 Gossypium hirsutum HOM05D005801 ORTHO05D008555 2.1e-131 473.8 683 45.8
RcHm_v2.0_Chr2g0091911 Rosa chinensis HOM05D005801 ORTHO05D008555 2.1e-131 473.8 308 76.9
FAN28G2516 Fragaria x ananassa HOM05D005801 ORTHO05D008555 3.5e-131 473.0 308 76.6
Dinv36686 Davidia involucrata HOM05D005801 ORTHO05D008555 4.6e-131 472.6 293 80.9
Nitab4.5_0001703g0010 Nicotiana tabacum HOM05D005801 ORTHO05D008555 6.0e-131 472.2 299 78.3
DCAR_028663 Daucus carota HOM05D005801 ORTHO05D008555 1.0e-130 471.5 311 77.5
Potri.018G087800 Populus trichocarpa HOM05D005801 ORTHO05D008555 1.0e-130 471.5 318 74.5
Eucgr.C00997 Eucalyptus grandis HOM05D005801 ORTHO05D008555 1.3e-130 471.1 315 76.2
Phvul.002G308600 Phaseolus vulgaris HOM05D005801 ORTHO05D008555 1.3e-130 471.1 318 76.4
SalBow1G2797 Salvia bowleyana HOM05D005801 ORTHO05D008555 1.3e-130 471.1 302 79.5
VMungo0251G1949 Vigna mungo HOM05D005801 ORTHO05D008555 1.8e-130 470.7 300 79.3
Lalb_Chr05g0223241 Lupinus albus HOM05D005801 ORTHO05D008555 2.3e-130 470.3 307 78.2
Psat7g016720 Pisum sativum HOM05D005801 ORTHO05D008555 2.3e-130 470.3 320 74.7
Lj4P387T11 Lonicera japonica HOM05D005801 ORTHO05D008555 3.0e-130 469.9 312 78.8
CiPaw.04G157900 Carya illinoinensis HOM05D005801 ORTHO05D008555 3.9e-130 469.5 313 75.1
FAN26G1273 Fragaria x ananassa HOM05D005801 ORTHO05D008555 5.1e-130 469.2 308 76.0
Medtr8g102480 Medicago truncatula HOM05D005801 ORTHO05D008555 8.7e-130 468.4 309 76.7
CAN.G370.29 Capsicum annuum HOM05D005801 ORTHO05D008555 1.5e-129 467.6 304 78.3
MD02G1065700 Malus domestica HOM05D005801 ORTHO05D008555 1.5e-129 467.6 318 73.6
MSTRG.10602 Avicennia marina HOM05D005801 ORTHO05D008555 2.5e-129 466.8 300 79.0
FAN19G0317 Fragaria x ananassa HOM05D005801 ORTHO05D008555 5.6e-129 465.7 308 75.3
Migut.K00541 Erythranthe guttata HOM05D005801 ORTHO05D008555 7.4e-129 465.3 300 79.7
GSVIVG01015302001 Vitis vinifera HOM05D005801 ORTHO05D008555 1.3e-128 464.5 319 74.9
Lj4g0016627 Lotus japonicus HOM05D005801 ORTHO05D008555 3.7e-128 463.0 300 78.0
MBI04_g34406_MAGBIO Magnolia biondii HOM05D005801 ORTHO05D008555 3.7e-128 463.0 291 80.1
Ciclev10007826m.g Citrus clementina HOM05D005801 ORTHO05D008555 1.8e-127 460.7 305 75.7
Sabra18G0076100 Salix brachista HOM05D005801 ORTHO05D008555 4.0e-127 459.5 319 73.7
Solyc05g017990.4 Solanum lycopersicum HOM05D005801 ORTHO05D008555 4.0e-127 459.5 293 78.5
Glyma.08G033500 Glycine max HOM05D005801 ORTHO05D008555 1.2e-126 458.0 300 78.3
FAN26G1315 Fragaria x ananassa HOM05D005801 ORTHO05D008555 1.5e-126 457.6 308 75.0
CsaV3_1G039790 Cucumis sativus L. HOM05D005801 ORTHO05D008555 7.6e-126 455.3 311 74.3
Sc18g0001500 Simmondsia chinensis HOM05D005801 ORTHO05D008555 1.3e-125 454.5 300 76.0
Thhalv10002296m.g Eutrema salsugineum HOM05D005801 ORTHO05D008555 1.1e-124 451.4 300 75.0
AL3G48350 Arabidopsis lyrata HOM05D005801 ORTHO05D008555 1.4e-124 451.1 300 75.0
Sp3g33210 Schrenkiella parvula HOM05D005801 ORTHO05D008555 1.4e-124 451.1 300 75.0
Carub.0003s3414 Capsella rubella HOM05D005801 ORTHO05D008555 1.9e-124 450.7 300 75.3
Sed0027809 Sechium edule HOM05D005801 ORTHO05D008555 1.9e-124 450.7 314 72.9
AT2G19870 Arabidopsis thaliana HOM05D005801 ORTHO05D008555 9.3e-124 448.4 300 74.3
MELO3C015412.2 Cucumis melo HOM05D005801 ORTHO05D008555 9.3e-124 448.4 308 73.4
Zm00001eb371210 Zea mays HOM05D005801 ORTHO05D008555 7.9e-123 445.3 298 73.5
CARHR110310 Cardamine hirsuta HOM05D005801 ORTHO05D008555 1.3e-122 444.5 300 73.7
unitig_46.g18397 Utricularia gibba HOM05D005801 ORTHO05D008555 1.3e-122 444.5 301 74.8
BcaB03g16775 Brassica carinata HOM05D005801 ORTHO05D008555 5.1e-122 442.6 301 76.4
BcaC06g36648 Brassica carinata HOM05D005801 ORTHO05D008555 3.3e-121 439.9 301 76.1
BolC7t40588H Brassica oleracea HOM05D005801 ORTHO05D008555 3.3e-121 439.9 301 76.1
BraA07t27882Z Brassica rapa HOM05D005801 ORTHO05D008555 7.4e-121 438.7 301 75.7
ECA234G2262 Erigeron canadensis HOM05D005801 ORTHO05D008555 1.6e-120 437.6 309 73.5
A07p00840 Brassica napus HOM05D005801 ORTHO05D008555 2.8e-120 436.8 301 75.4
CDE04G1187 Ceratophyllum demersum HOM05D005801 ORTHO05D008555 1.4e-119 434.5 301 73.1
C07p01810 Brassica napus HOM05D005801 ORTHO05D008555 1.8e-119 434.1 301 74.8
ATR0681G166 Amborella trichopoda HOM05D005801 ORTHO05D008555 4.1e-119 433.0 317 70.3
Lsat_1_v5_gn_5_144900 Lactuca sativa HOM05D005801 ORTHO05D008555 5.3e-119 432.6 310 71.6
Actinidia32650 Actinidia chinensis HOM05D005801 ORTHO05D008555 1.2e-118 431.4 312 72.1
Cpa.g.sc40.94 Carica papaya HOM05D005801 ORTHO05D008555 1.7e-117 427.6 290 73.8
HPP92_009088 Vanilla planifolia HOM05D005801 ORTHO05D008555 1.9e-113 414.1 300 70.3
SGA_v2.0_scaffold129G34141 Striga asiatica HOM05D005801 ORTHO05D008555 3.3e-113 413.3 300 71.0
HanXRQChr10g0318941 Helianthus annuus HOM05D005801 ORTHO05D008555 1.4e-111 407.9 283 76.0
HanXRQChr14g0438761 Helianthus annuus HOM05D005801 ORTHO05D008555 1.4e-111 407.9 283 76.0
HanXRQChr10g0318931 Helianthus annuus HOM05D005801 ORTHO05D008555 2.0e-110 404.1 295 72.9
Aa31LG8G16820 Aethionema arabicum HOM05D005801 ORTHO05D008555 5.0e-109 399.4 304 65.8
SHI02689 Sapria himalayana HOM05D005801 ORTHO05D008555 8.5e-109 398.7 300 67.3
AUR62021403 Chenopodium quinoa HOM05D005801 ORTHO05D008555 1.0e-106 391.7 315 64.1
MD15G1196600 Malus domestica HOM05D005801 ORTHO05D008555 2.8e-104 383.6 275 72.7
AUR62010892 Chenopodium quinoa HOM05D005801 ORTHO05D008555 4.1e-103 379.8 315 63.5
Mapoly0135s0034 Marchantia polymorpha HOM05D005801 ORTHO05D008555 1.3e-80 305.1 313 51.4
Pp3c17_17180 Physcomitrium patens HOM05D005801 ORTHO05D008555 8.8e-74 282.3 298 51.3
CBR_g20364 Chara braunii HOM05D005801 ORTHO05D008555 1.7e-72 278.1 292 51.4
FvH4_1g06190 Fragaria vesca HOM05D005801 ORTHO05D008555 6.3e-72 276.2 175 77.7
Lalb_Chr09g0331541 Lupinus albus HOM05D005801 ORTHO05D008555 1.9e-68 264.6 220 65.5
SMO367G0373 Selaginella moellendorffii HOM05D005801 ORTHO05D008555 3.6e-67 260.4 278 52.5
Lj6C67T4 Lonicera japonica HOM05D005801 ORTHO05D008555 1.5e-60 238.4 178 70.2
CAN.G640.23 Capsicum annuum HOM05D005801 ORTHO05D008555 8.6e-53 212.6 210 56.7
Os01g0742000 Oryza sativa ssp. japonica HOM05D005801 ORTHO05D008555 9.5e-52 209.1 163 66.9
Cre13.g566150 Chlamydomonas reinhardtii HOM05D005801 ORTHO05D008555 2.6e-49 201.1 299 40.5
CDE02G3237 Ceratophyllum demersum HOM05D005801 ORTHO05D008555 2.2e-48 198.0 151 70.9
CAN.G775.15 Capsicum annuum HOM05D005801 ORTHO05D008555 1.2e-46 192.2 288 43.8
MCO03G539 Micromonas commoda HOM05D005801 ORTHO05D008555 3.5e-46 190.7 303 40.6
PRCOL_00003145 Prasinoderma coloniale HOM05D005801 ORTHO05D008555 4.6e-46 190.3 294 40.5
CAN.G1277.2 Capsicum annuum HOM05D005801 ORTHO05D008555 1.1e-34 152.5 286 39.9
HanXRQChr12g0378121 Helianthus annuus HOM05D005801 ORTHO05D008555 3.0e-29 134.4 92 65.2
EL10Ac8g19871 Beta vulgaris HOM05D005801 ORTHO05D008555 2.7e-22 111.3 94 62.8
CAN.G77.3 Capsicum annuum HOM05D005801 ORTHO05D008555 1.1e-20 105.9 83 61.4
BcaC04g20246 Brassica carinata HOM05D005801 ORTHO05D016715 2.9e-16 91.3 73 57.5
BolC9t57462H Brassica oleracea HOM05D005801 ORTHO05D016715 2.9e-16 91.3 73 57.5
C09p45950 Brassica napus HOM05D005801 ORTHO05D016715 4.9e-16 90.5 73 56.2
A07p26140 Brassica napus HOM05D005801 ORTHO05D013666 2.1e-14 85.1 73 56.2
Lalb_Chr09g0331551 Lupinus albus HOM05D005801 ORTHO05D008555 2.1e-14 85.1 47 80.9
BraA07t30260Z Brassica rapa HOM05D005801 ORTHO05D013666 2.7e-14 84.7 73 56.2
Ca_28666_v3 Cicer arietinum L. HOM05D005801 ORTHO05D009370 3.0e-13 81.3 239 28.0
BcaC03g16316 Brassica carinata HOM05D005801 ORTHO05D016715 8.7e-13 79.7 71 50.7
BcaC04g22492 Brassica carinata HOM05D005801 ORTHO05D016715 1.6e-11 75.5 64 59.4
C03p54440 Brassica napus HOM05D005801 ORTHO05D041341 2.1e-11 75.1 56 60.7
BolC3t17730H Brassica oleracea HOM05D005801 ORTHO05D041341 2.1e-11 75.1 56 60.7
BcaB08g34890 Brassica carinata HOM05D005801 ORTHO05D008555 3.4e-09 67.8 80 53.8
MD01G1041100 Malus domestica HOM05D007191 ORTHO05D009370 7.9e-06 56.6 180 31.7


User provided reference genes

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