Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G3650 Papaver somniferum HOM05D005810 ORTHO05D007279 0.0e+00 1459.9 747 100.0
PSO210G1835 Papaver somniferum HOM05D005810 ORTHO05D007279 0.0e+00 1404.4 749 96.8
Aqoxy5G00419 Aquilegia oxysepala HOM05D005810 ORTHO05D007279 9.9e-274 946.8 748 67.5
CANSAT54G2140 Cannabis sativa HOM05D005810 ORTHO05D007279 2.5e-264 915.6 747 63.6
Cfa006452 Carpinus fangiana HOM05D005810 ORTHO05D007279 3.5e-263 911.8 724 65.9
QL03p024871 Quercus lobata HOM05D005810 ORTHO05D007279 6.7e-262 907.5 733 65.5
Potri.005G051400 Populus trichocarpa HOM05D005810 ORTHO05D007279 1.2e-258 896.7 697 66.4
FvH4_6g03330 Fragaria vesca HOM05D005810 ORTHO05D007279 5.9e-258 894.4 754 61.9
Eucgr.B01694 Eucalyptus grandis HOM05D005810 ORTHO05D007279 5.5e-256 887.9 691 67.1
Prupe.6G340900 Prunus persica HOM05D005810 ORTHO05D007279 9.3e-256 887.1 734 63.9
CSS0013071 Camellia sinensis var. sinensis HOM05D005810 ORTHO05D007279 2.3e-254 882.5 716 65.4
Duzib177G1000 Durio zibethinus HOM05D005810 ORTHO05D007279 3.9e-254 881.7 737 62.8
CSS0027419 Camellia sinensis var. sinensis HOM05D005810 ORTHO05D007279 6.7e-254 880.9 708 65.7
RcHm_v2.0_Chr3g0451831 Rosa chinensis HOM05D005810 ORTHO05D007279 9.7e-253 877.1 756 62.0
GSVIVG01021833001 Vitis vinifera HOM05D005810 ORTHO05D007279 9.7e-253 877.1 699 67.0
Lj1g0027742 Lotus japonicus HOM05D005810 ORTHO05D007279 1.3e-252 876.7 696 66.4
Thecc.05G287300 Theobroma cacao HOM05D005810 ORTHO05D007279 1.4e-251 873.2 737 62.3
PGR031G1118 Punica granatum HOM05D005810 ORTHO05D007279 1.8e-251 872.8 692 65.8
COL.COLO4_15299 Corchorus olitorius HOM05D005810 ORTHO05D007279 3.4e-250 868.6 703 64.9
AL3G14980 Arabidopsis lyrata HOM05D005810 ORTHO05D007279 2.5e-248 862.4 721 64.2
Sp3g03650 Schrenkiella parvula HOM05D005810 ORTHO05D007279 2.5e-248 862.4 717 64.3
THA.LOC104821678 Tarenaya hassleriana HOM05D005810 ORTHO05D007279 9.4e-248 860.5 728 63.9
Ciclev10003382m.g Citrus clementina HOM05D005810 ORTHO05D007279 7.9e-247 857.4 694 66.3
CARHR079070 Cardamine hirsuta HOM05D005810 ORTHO05D007279 1.4e-246 856.7 720 63.6
Gorai.007G284000 Gossypium raimondii HOM05D005810 ORTHO05D007279 3.9e-246 855.1 728 62.9
MD04G1221700 Malus domestica HOM05D005810 ORTHO05D007279 2.6e-245 852.4 738 62.9
AT3G04820 Arabidopsis thaliana HOM05D005810 ORTHO05D007279 5.7e-245 851.3 723 63.3
Gohir.A11G254200 Gossypium hirsutum HOM05D005810 ORTHO05D007279 1.3e-244 850.1 728 62.2
Gohir.D11G264000 Gossypium hirsutum HOM05D005810 ORTHO05D007279 2.2e-244 849.4 728 62.6
Migut.B01074 Erythranthe guttata HOM05D005810 ORTHO05D007279 2.4e-243 845.9 737 61.6
EL10Ac4g09107 Beta vulgaris HOM05D005810 ORTHO05D007279 5.9e-242 841.3 685 63.8
BcaB04g19298 Brassica carinata HOM05D005810 ORTHO05D007279 5.9e-242 841.3 703 63.3
Lalb_Chr18g0045021 Lupinus albus HOM05D005810 ORTHO05D007279 3.8e-241 838.6 694 64.3
MELO3C024669.2 Cucumis melo HOM05D005810 ORTHO05D007279 6.5e-241 837.8 694 64.1
Sed0015078 Sechium edule HOM05D005810 ORTHO05D007279 2.5e-240 835.9 738 61.8
arahy.Tifrunner.gnm1.ann1.BBX725 Arachis hypogaea HOM05D005810 ORTHO05D007279 3.2e-240 835.5 705 63.3
BcaC01g04347 Brassica carinata HOM05D005810 ORTHO05D007279 1.2e-239 833.6 718 62.3
Cpa.g.sc117.72 Carica papaya HOM05D005810 ORTHO05D007279 1.2e-239 833.6 737 61.3
Rhsim05G0160900 Rhododendron simsii HOM05D005810 ORTHO05D007279 1.2e-239 833.6 712 62.1
Phvul.006G100200 Phaseolus vulgaris HOM05D005810 ORTHO05D007279 2.1e-239 832.8 698 63.0
BolC3t16404H Brassica oleracea HOM05D005810 ORTHO05D007279 2.7e-239 832.4 719 62.4
arahy.Tifrunner.gnm1.ann1.E80190 Arachis hypogaea HOM05D005810 ORTHO05D007279 3.6e-239 832.0 705 63.0
Glyma.03G245900 Glycine max HOM05D005810 ORTHO05D007279 4.7e-239 831.6 697 63.1
Ca_09411_v3 Cicer arietinum L. HOM05D005810 ORTHO05D007279 8.0e-239 830.9 713 62.3
BraA03t12559Z Brassica rapa HOM05D005810 ORTHO05D007279 1.4e-238 830.1 731 61.6
C03p41160 Brassica napus HOM05D005810 ORTHO05D007279 1.4e-235 820.1 713 62.0
ClCG06G009190 Citrullus lanatus HOM05D005810 ORTHO05D007279 2.4e-235 819.3 723 61.8
VMungo0222G0001 Vigna mungo HOM05D005810 ORTHO05D007279 3.1e-235 818.9 702 62.1
SalBow8G0563 Salvia bowleyana HOM05D005810 ORTHO05D007279 5.3e-235 818.1 729 60.2
A03p33850 Brassica napus HOM05D005810 ORTHO05D007279 1.2e-234 817.0 725 61.2
ECA232G3974 Erigeron canadensis HOM05D005810 ORTHO05D007279 2.0e-234 816.2 703 60.5
Thhalv10022286m.g Eutrema salsugineum HOM05D005810 ORTHO05D007279 1.0e-233 813.9 716 61.5
Aa31LG5G15210 Aethionema arabicum HOM05D005810 ORTHO05D007279 2.2e-233 812.8 764 59.3
Psat3g008040 Pisum sativum HOM05D005810 ORTHO05D007279 4.0e-230 802.0 705 61.6
AUR62001034 Chenopodium quinoa HOM05D005810 ORTHO05D007279 3.3e-229 798.9 791 56.1
Ah.06g192190 Amaranthus hybridus HOM05D005810 ORTHO05D007279 4.8e-228 795.0 704 59.2
CDE05G3473 Ceratophyllum demersum HOM05D005810 ORTHO05D007279 4.8e-228 795.0 702 61.5
HanXRQChr12g0379621 Helianthus annuus HOM05D005810 ORTHO05D007279 6.3e-228 794.7 729 59.0
MD12G1237800 Malus domestica HOM05D005810 ORTHO05D007279 2.4e-227 792.7 599 66.6
Medtr7g114850 Medicago truncatula HOM05D005810 ORTHO05D007279 4.5e-226 788.5 709 60.5
Glyma.19G243400 Glycine max HOM05D005810 ORTHO05D007279 1.0e-225 787.3 695 61.0
Carub.0003s0400 Capsella rubella HOM05D005810 ORTHO05D007279 2.6e-221 772.7 623 65.7
DCAR_006618 Daucus carota HOM05D005810 ORTHO05D007279 3.4e-221 772.3 691 59.8
vmacro14215 Vaccinium macrocarpon HOM05D005810 ORTHO05D007279 1.1e-219 767.3 797 53.5
AUR62004921 Chenopodium quinoa HOM05D005810 ORTHO05D007279 1.0e-217 760.8 758 56.5
CAN.G134.120 Capsicum annuum HOM05D005810 ORTHO05D007279 5.0e-217 758.4 663 62.7
Nitab4.5_0005059g0010 Nicotiana tabacum HOM05D005810 ORTHO05D007279 1.1e-216 757.3 708 59.5
MBI11_g10322_MAGBIO Magnolia biondii HOM05D005810 ORTHO05D007279 8.3e-212 741.1 767 57.1
Lsat_1_v5_gn_5_37760 Lactuca sativa HOM05D005810 ORTHO05D007279 1.4e-211 740.3 616 64.1
Hund06958 Selenicereus undatus HOM05D005810 ORTHO05D007279 2.4e-211 739.6 756 56.0
CiPaw.07G064800 Carya illinoinensis HOM05D005810 ORTHO05D007279 9.2e-211 737.6 532 70.1
ATR0665G477 Amborella trichopoda HOM05D005810 ORTHO05D007279 1.2e-210 737.3 723 56.2
Peaxi162Scf00282g00136 Petunia axillaris HOM05D005810 ORTHO05D007279 1.2e-210 737.3 712 58.0
HPP92_028013 Vanilla planifolia HOM05D005810 ORTHO05D007279 1.7e-209 733.4 699 57.7
Sc09g0003830 Simmondsia chinensis HOM05D005810 ORTHO05D007279 1.5e-200 703.7 528 66.3
Manes.08G132300 Manihot esculenta HOM05D005810 ORTHO05D007279 9.5e-200 701.0 578 61.8
FAN05G1843 Fragaria x ananassa HOM05D005810 ORTHO05D007279 2.9e-196 689.5 702 55.7
Manes.09G154600 Manihot esculenta HOM05D005810 ORTHO05D007279 1.1e-195 687.6 496 69.8
Zm00001eb328420 Zea mays HOM05D005810 ORTHO05D007279 1.4e-190 670.6 699 53.9
Atru.chr2.784 Acer truncatum HOM05D005810 ORTHO05D007279 4.1e-187 659.1 441 74.8
CsaV3_1G045590 Cucumis sativus L. HOM05D005810 ORTHO05D007279 1.0e-185 654.4 563 62.0
TPR.G6991 Trifolium pratense HOM05D005810 ORTHO05D007279 1.5e-184 650.6 572 62.1
unitig_37.g12634 Utricularia gibba HOM05D005810 ORTHO05D007279 2.5e-184 649.8 708 52.1
Cc02_g31830 Coffea canephora HOM05D005810 ORTHO05D007279 4.9e-180 635.6 494 66.2
Pp3c18_8560 Physcomitrium patens HOM05D005810 ORTHO05D007279 4.7e-175 619.0 724 46.4
Mapoly0092s0013 Marchantia polymorpha HOM05D005810 ORTHO05D007279 1.4e-174 617.5 726 47.5
Lj7C488G4 Lonicera japonica HOM05D005810 ORTHO05D007279 5.8e-173 612.1 730 50.3
TAR365G0727 Trochodendron aralioides HOM05D005810 ORTHO05D007279 7.1e-163 578.6 498 62.4
Eucgr.B02108 Eucalyptus grandis HOM05D005810 ORTHO05D007279 1.1e-152 544.7 494 60.5
SMO351G0210 Selaginella moellendorffii HOM05D005810 ORTHO05D007279 7.4e-152 542.0 723 42.3
Haze_04339 Corylus avellana HOM05D005810 ORTHO05D007279 5.1e-145 519.2 388 68.0
Zm00001eb352870 Zea mays HOM05D005810 ORTHO05D007279 1.7e-140 504.2 415 62.7
FAN14G4259 Fragaria x ananassa HOM05D005810 ORTHO05D007279 1.5e-133 481.1 404 62.4
FAN05G0700 Fragaria x ananassa HOM05D005810 ORTHO05D007279 1.4e-131 474.6 404 62.6
Solyc01g097600.2 Solanum lycopersicum HOM05D005810 ORTHO05D007279 1.9e-131 474.2 375 66.1
FAN02G1150 Fragaria x ananassa HOM05D005810 ORTHO05D007279 1.2e-130 471.5 403 61.3
Sopen01g041230 Solanum pennellii HOM05D005810 ORTHO05D007279 2.8e-127 460.3 349 67.9
MCO09G788 Micromonas commoda HOM05D005810 ORTHO05D007279 3.3e-120 436.8 762 37.3
Oeu060673.3 Olea europaea HOM05D005810 ORTHO05D007279 9.7e-120 435.3 793 39.6
Os05g0509300 Oryza sativa ssp. japonica HOM05D005810 ORTHO05D007279 5.3e-118 429.5 363 60.9
CBR_g36821 Chara braunii HOM05D005810 ORTHO05D007279 9.4e-115 418.7 802 34.8
SMO364G0521 Selaginella moellendorffii HOM05D005810 ORTHO05D007279 4.0e-105 386.7 711 35.9
Dinv13659 Davidia involucrata HOM05D005810 ORTHO05D007279 6.3e-103 379.4 314 63.4
Dinv13660 Davidia involucrata HOM05D005810 ORTHO05D007279 1.2e-96 358.6 314 62.1
Os01g0773000 Oryza sativa ssp. japonica HOM05D005810 ORTHO05D007279 1.3e-95 355.1 334 57.2
AagrBONN_evm.TU.Sc2ySwM_362.2883 Anthoceros agrestis HOM05D005810 ORTHO05D007279 2.4e-94 350.9 341 54.8
PRCOL_00005025 Prasinoderma coloniale HOM05D005810 ORTHO05D007279 4.0e-89 333.6 729 33.7
CsaV3_UNG004080 Cucumis sativus L. HOM05D005810 ORTHO05D007279 2.8e-74 284.3 237 62.0
Haze_04340 Corylus avellana HOM05D005810 ORTHO05D007279 3.3e-67 260.8 261 57.5
Cre01.g007651 Chlamydomonas reinhardtii HOM05D005810 ORTHO05D007279 1.1e-65 255.8 652 30.7
Zm00001eb281050 Zea mays HOM05D005810 ORTHO05D007279 1.4e-65 255.4 160 78.1
Nitab4.5_0005729g0080 Nicotiana tabacum HOM05D005810 ORTHO05D007279 7.6e-64 249.6 206 63.6
AagrBONN_evm.TU.Sc2ySwM_362.2882 Anthoceros agrestis HOM05D005810 ORTHO05D007279 1.3e-63 248.8 332 44.0
Nitab4.5_0005729g0060 Nicotiana tabacum HOM05D005810 ORTHO05D007279 7.8e-61 239.6 231 56.7
Zm00001eb054900 Zea mays HOM05D005810 ORTHO05D007279 1.5e-59 235.3 174 69.5
SGA_v2.0_scaffold92G28303 Striga asiatica HOM05D005810 ORTHO05D007279 9.6e-59 232.6 194 61.9
Nitab4.5_0005729g0070 Nicotiana tabacum HOM05D005810 ORTHO05D007279 8.4e-55 219.5 271 50.6
HPP92_018612 Vanilla planifolia HOM05D005810 ORTHO05D007279 2.3e-52 211.5 168 62.5
TPR.G21485 Trifolium pratense HOM05D005810 ORTHO05D007279 5.4e-46 190.3 169 58.6
Cc02_g31840 Coffea canephora HOM05D005810 ORTHO05D007279 2.7e-45 188.0 211 52.1
Atru.chr2.785 Acer truncatum HOM05D005810 ORTHO05D007279 2.1e-42 178.3 156 57.7
SHI07783 Sapria himalayana HOM05D000023 ORTHO05D000014 5.7e-35 153.7 130 60.0
FAN09G1409 Fragaria x ananassa HOM05D005810 ORTHO05D007279 3.1e-25 121.3 158 45.6
Hma1.2p1_0083F.1_g042850 Hydrangea macrophylla HOM05D005810 ORTHO05D007279 1.2e-24 119.4 149 51.7
CsaV3_UNG004060 Cucumis sativus L. HOM05D005810 ORTHO05D007279 4.5e-24 117.5 148 50.0
Sopen01g041220 Solanum pennellii HOM05D005810 ORTHO05D007279 5.0e-23 114.0 145 51.7
ClCG06G009160 Citrullus lanatus HOM05D005810 ORTHO05D007279 9.4e-22 109.8 153 45.8
CsaV3_1G045610 Cucumis sativus L. HOM05D005810 ORTHO05D007279 3.3e-19 101.3 140 47.1
MBI11_g02497_MAGBIO Magnolia biondii HOM05D005810 ORTHO05D007279 6.1e-13 80.5 228 33.3
SHI07786 Sapria himalayana HOM05D005810 ORTHO05D007279 1.1e-11 76.3 47 74.5
Mapoly0081s0042 Marchantia polymorpha HOM05D005810 ORTHO05D007279 2.0e-11 75.5 51 64.7
Mapoly0027s0098 Marchantia polymorpha HOM05D005810 ORTHO05D007279 1.3e-10 72.8 51 62.7
CiPaw.07G064900 Carya illinoinensis HOM05D005810 ORTHO05D007279 1.5e-08 65.9 36 91.7


User provided reference genes

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