Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G0272 Papaver somniferum HOM05D004156 ORTHO05D005259 4.0e-180 634.8 326 100.0
PSO210G0875 Papaver somniferum HOM05D004156 ORTHO05D005259 3.7e-178 628.2 326 99.1
Dinv36535 Davidia involucrata HOM05D004156 ORTHO05D003047 6.2e-125 451.4 314 74.2
TAR625G0545 Trochodendron aralioides HOM05D004156 ORTHO05D005259 6.9e-124 448.0 317 73.8
Hma1.2p1_0018F.1_g012530 Hydrangea macrophylla HOM05D004156 ORTHO05D005259 9.0e-124 447.6 319 72.1
Nn8g39422 Nelumbo nucifera HOM05D004156 ORTHO05D005259 2.6e-123 446.0 303 76.2
CSS0011304 Camellia sinensis var. sinensis HOM05D004156 ORTHO05D005259 5.8e-123 444.9 320 71.6
Actinidia35394 Actinidia chinensis HOM05D004156 ORTHO05D005259 9.3e-121 437.6 294 74.5
GSVIVG01027422001 Vitis vinifera HOM05D004156 ORTHO05D005259 1.6e-120 436.8 309 71.5
Peaxi162Scf00274g00336 Petunia axillaris HOM05D004156 ORTHO05D005259 2.7e-120 436.0 312 73.1
Ciclev10008881m.g Citrus clementina HOM05D004156 ORTHO05D005259 1.9e-118 429.9 309 71.8
CsaV3_1G042300 Cucumis sativus L. HOM05D004156 ORTHO05D005259 4.3e-118 428.7 326 68.7
GSVIVG01027072001 Vitis vinifera HOM05D004156 ORTHO05D005259 5.6e-118 428.3 318 69.8
Cfa002719 Carpinus fangiana HOM05D004156 ORTHO05D005259 1.3e-117 427.2 304 71.4
Lsat_1_v5_gn_9_120581 Lactuca sativa HOM05D004156 ORTHO05D005259 1.6e-117 426.8 324 67.9
Aqoxy2G02204 Aquilegia oxysepala HOM05D004156 ORTHO05D005259 2.8e-117 426.0 291 72.5
Gorai.001G041600 Gossypium raimondii HOM05D004156 ORTHO05D005259 2.8e-117 426.0 313 70.3
Gorai.009G018400 Gossypium raimondii HOM05D004156 ORTHO05D005259 3.7e-117 425.6 313 70.0
MBI01_g37801_MAGBIO Magnolia biondii HOM05D004156 ORTHO05D005259 8.2e-117 424.5 318 71.1
Solyc12g006550.2 Solanum lycopersicum HOM05D004156 ORTHO05D005259 1.1e-116 424.1 320 69.1
PGSC0003DMG400018964 Solanum tuberosum HOM05D004156 ORTHO05D005259 1.1e-116 424.1 320 68.8
Gohir.D07G039500 Gossypium hirsutum HOM05D004156 ORTHO05D005259 1.4e-116 423.7 313 70.0
Nitab4.5_0005139g0050 Nicotiana tabacum HOM05D004156 ORTHO05D005259 1.4e-116 423.7 323 68.7
Aqoxy6G01405 Aquilegia oxysepala HOM05D004156 ORTHO05D005259 1.8e-116 423.3 289 72.3
MD02G1034000 Malus domestica HOM05D004156 ORTHO05D005259 1.8e-116 423.3 314 70.4
Prupe.7G241100 Prunus persica HOM05D004156 ORTHO05D005259 1.8e-116 423.3 317 70.0
Gohir.A07G035500 Gossypium hirsutum HOM05D004156 ORTHO05D005259 2.4e-116 422.9 313 69.6
Haze_24995 Corylus avellana HOM05D004156 ORTHO05D005259 3.1e-116 422.5 304 70.4
Lj7C630T1 Lonicera japonica HOM05D004156 ORTHO05D005259 3.1e-116 422.5 322 68.6
Sopen12g002500 Solanum pennellii HOM05D004156 ORTHO05D005259 3.1e-116 422.5 320 68.8
MD15G1174800 Malus domestica HOM05D004156 ORTHO05D005259 4.0e-116 422.2 314 69.7
Nitab4.5_0010819g0030 Nicotiana tabacum HOM05D004156 ORTHO05D005259 9.0e-116 421.0 323 68.7
HanXRQChr06g0181321 Helianthus annuus HOM05D004156 ORTHO05D005259 1.2e-115 420.6 321 66.4
ClCG03G013780 Citrullus lanatus HOM05D004156 ORTHO05D005259 2.6e-115 419.5 327 67.9
Gohir.A05G017100 Gossypium hirsutum HOM05D004156 ORTHO05D005259 2.6e-115 419.5 305 70.8
Thecc.09G124800 Theobroma cacao HOM05D004156 ORTHO05D005259 2.6e-115 419.5 318 69.5
CAN.G594.20 Capsicum annuum HOM05D004156 ORTHO05D005259 3.4e-115 419.1 305 70.5
DCAR_014878 Daucus carota HOM05D004156 ORTHO05D005259 7.6e-115 417.9 290 73.4
ECA247G0053 Erigeron canadensis HOM05D004156 ORTHO05D005259 7.6e-115 417.9 323 67.2
CiPaw.07G232300 Carya illinoinensis HOM05D004156 ORTHO05D005259 1.3e-114 417.2 319 68.3
Eucgr.E02428 Eucalyptus grandis HOM05D004156 ORTHO05D005259 1.7e-114 416.8 307 69.4
Cpa.g.sc1199.3 Carica papaya HOM05D004156 ORTHO05D005259 2.9e-114 416.0 315 67.9
MELO3C015663.2 Cucumis melo HOM05D004156 ORTHO05D005259 8.4e-114 414.5 293 71.3
HanXRQChr07g0187411 Helianthus annuus HOM05D004156 ORTHO05D005259 8.4e-114 414.5 319 67.4
PGR102G0554 Punica granatum HOM05D004156 ORTHO05D005259 1.1e-113 414.1 312 68.3
Cc06_g08630 Coffea canephora HOM05D004156 ORTHO05D005259 1.9e-113 413.3 312 69.9
Duzib150G1332 Durio zibethinus HOM05D004156 ORTHO05D005259 2.5e-113 412.9 317 68.8
THA.LOC104806527 Tarenaya hassleriana HOM05D004156 ORTHO05D005259 2.5e-113 412.9 319 67.1
Sed0021765 Sechium edule HOM05D004156 ORTHO05D005259 3.2e-113 412.5 313 68.7
MSTRG.12622 Avicennia marina HOM05D004156 ORTHO05D005259 9.3e-113 411.0 315 67.6
Sc14g0000240 Simmondsia chinensis HOM05D004156 ORTHO05D005259 9.3e-113 411.0 291 70.8
COL.COLO4_05789 Corchorus olitorius HOM05D004156 ORTHO05D005259 1.2e-112 410.6 328 67.4
Atru.chr7.278 Acer truncatum HOM05D004156 ORTHO05D005259 2.1e-112 409.8 289 72.0
Potri.005G231000 Populus trichocarpa HOM05D004156 ORTHO05D005259 4.6e-112 408.7 298 70.1
Phvul.009G258100 Phaseolus vulgaris HOM05D004156 ORTHO05D005259 6.1e-112 408.3 323 66.3
Rhsim03G0247600 Rhododendron simsii HOM05D004156 ORTHO05D005259 6.1e-112 408.3 387 58.9
THA.LOC104805714 Tarenaya hassleriana HOM05D004156 ORTHO05D005259 6.1e-112 408.3 315 68.6
FAN23G0721 Fragaria x ananassa HOM05D004156 ORTHO05D005259 1.0e-111 407.5 316 66.8
FAN26G1774 Fragaria x ananassa HOM05D004156 ORTHO05D005259 1.0e-111 407.5 316 66.8
FAN19G1880 Fragaria x ananassa HOM05D004156 ORTHO05D005259 1.3e-111 407.1 316 66.8
FAN28G2743 Fragaria x ananassa HOM05D004156 ORTHO05D005259 1.3e-111 407.1 316 66.8
VMungo1309G1108 Vigna mungo HOM05D004156 ORTHO05D005259 1.3e-111 407.1 323 65.9
FvH4_1g03500 Fragaria vesca HOM05D004156 ORTHO05D005259 2.3e-111 406.4 316 66.8
vmacro22115 Vaccinium macrocarpon HOM05D004156 ORTHO05D005259 8.7e-111 404.4 311 67.2
Aa31LG5G23180 Aethionema arabicum HOM05D004156 ORTHO05D005259 2.5e-110 402.9 316 66.5
Glyma.13G167900 Glycine max HOM05D004156 ORTHO05D005259 4.3e-110 402.1 324 65.7
DCAR_017823 Daucus carota HOM05D004156 ORTHO05D005259 5.7e-110 401.7 353 63.7
Psat2g006920 Pisum sativum HOM05D004156 ORTHO05D005259 7.4e-110 401.4 323 65.6
CANSAT11G1878 Cannabis sativa HOM05D004156 ORTHO05D005259 1.6e-109 400.2 315 67.6
TWI32G0547 Tripterygium wilfordii HOM05D004156 ORTHO05D005259 1.6e-109 400.2 318 66.4
Glyma.17G115500 Glycine max HOM05D004156 ORTHO05D005259 2.2e-109 399.8 324 65.1
Manes.14G131500 Manihot esculenta HOM05D004156 ORTHO05D005259 4.8e-109 398.7 313 65.8
Sabra05G0178400 Salix brachista HOM05D004156 ORTHO05D000382 4.8e-109 398.7 309 66.3
HPP92_015694 Vanilla planifolia HOM05D004156 ORTHO05D005259 8.2e-109 397.9 318 66.4
Ah.14g087130 Amaranthus hybridus HOM05D004156 ORTHO05D005259 1.1e-108 397.5 285 70.2
AUR62013371 Chenopodium quinoa HOM05D004156 ORTHO05D005259 1.8e-108 396.7 289 68.9
SGA_v2.0_scaffold35G14133 Striga asiatica HOM05D004156 ORTHO05D005259 2.4e-108 396.4 317 65.3
EL10Ac8g18639 Beta vulgaris HOM05D004156 ORTHO05D005259 5.3e-108 395.2 313 65.5
A03p21000 Brassica napus HOM05D004156 ORTHO05D005259 4.5e-107 392.1 310 65.8
BraA03t11339Z Brassica rapa HOM05D004156 ORTHO05D005259 4.5e-107 392.1 310 65.8
Phvul.003G163900 Phaseolus vulgaris HOM05D004156 ORTHO05D005259 7.7e-107 391.3 323 63.8
QL02p088083 Quercus lobata HOM05D004156 ORTHO05D005259 1.0e-106 391.0 315 63.2
Sp4g20310 Schrenkiella parvula HOM05D004156 ORTHO05D005259 1.3e-106 390.6 309 65.7
ATR0730G095 Amborella trichopoda HOM05D004156 ORTHO05D005259 2.2e-106 389.8 313 65.5
AL4G34970 Arabidopsis lyrata HOM05D004156 ORTHO05D005259 2.2e-106 389.8 304 66.4
Thhalv10016958m.g Eutrema salsugineum HOM05D004156 ORTHO05D005259 2.9e-106 389.4 306 65.4
VMungo1215G1862 Vigna mungo HOM05D004156 ORTHO05D005259 5.0e-106 388.7 323 63.5
Lj4g0019515 Lotus japonicus HOM05D004156 ORTHO05D005259 8.5e-106 387.9 313 65.2
AUR62011120 Chenopodium quinoa HOM05D004156 ORTHO05D005259 1.1e-105 387.5 299 66.2
unitig_21.g20656 Utricularia gibba HOM05D004156 ORTHO05D005259 1.4e-105 387.1 317 64.0
arahy.Tifrunner.gnm1.ann1.KP5LKI Arachis hypogaea HOM05D004156 ORTHO05D005259 1.9e-105 386.7 315 64.8
Oeu055874.1 Olea europaea HOM05D004156 ORTHO05D005259 1.9e-105 386.7 306 66.3
Migut.L01695 Erythranthe guttata HOM05D004156 ORTHO05D005259 3.2e-105 386.0 325 62.2
Carub.0004s1996 Capsella rubella HOM05D004156 ORTHO05D005259 4.2e-105 385.6 304 66.1
Sed0019954 Sechium edule HOM05D004156 ORTHO05D005259 4.2e-105 385.6 318 63.8
A04p29140 Brassica napus HOM05D004156 ORTHO05D005259 7.2e-105 384.8 308 65.3
BcaC01g05579 Brassica carinata HOM05D004156 ORTHO05D005259 2.7e-104 382.9 308 64.6
BolC3t14862H Brassica oleracea HOM05D004156 ORTHO05D005259 2.7e-104 382.9 308 64.6
BraA04t18383Z Brassica rapa HOM05D004156 ORTHO05D005259 2.7e-104 382.9 308 65.3
BcaC02g12926 Brassica carinata HOM05D004156 ORTHO05D005259 3.6e-104 382.5 309 64.1
TPR.G25243 Trifolium pratense HOM05D004156 ORTHO05D005259 3.6e-104 382.5 326 62.9
TWI34G0257 Tripterygium wilfordii HOM05D004156 ORTHO05D005259 3.6e-104 382.5 356 59.0
BcaNung06518 Brassica carinata HOM05D004156 ORTHO05D005259 4.6e-104 382.1 308 64.6
C04p66350 Brassica napus HOM05D004156 ORTHO05D005259 7.9e-104 381.3 308 64.9
arahy.Tifrunner.gnm1.ann1.FDU8BE Arachis hypogaea HOM05D004156 ORTHO05D005259 1.0e-103 380.9 311 64.3
Medtr2g008870 Medicago truncatula HOM05D004156 ORTHO05D005259 1.8e-103 380.2 316 63.6
RcHm_v2.0_Chr2g0088711 Rosa chinensis HOM05D004156 ORTHO05D005259 1.8e-103 380.2 304 64.8
SGA_v2.0_scaffold224G42948 Striga asiatica HOM05D004156 ORTHO05D005259 2.3e-103 379.8 337 62.3
Lalb_Chr12g0197861 Lupinus albus HOM05D004156 ORTHO05D005259 2.5e-102 376.3 319 62.4
BolC4t28140H Brassica oleracea HOM05D004156 ORTHO05D005259 4.3e-102 375.6 313 64.2
ClCG06G011000 Citrullus lanatus HOM05D004156 ORTHO05D005259 4.3e-102 375.6 316 62.0
AT2G37990 Arabidopsis thaliana HOM05D004156 ORTHO05D005259 5.7e-102 375.2 306 65.0
CARHR132550 Cardamine hirsuta HOM05D004156 ORTHO05D005259 5.7e-102 375.2 314 63.7
Zm00001eb122260 Zea mays HOM05D004156 ORTHO05D005259 6.3e-101 371.7 320 62.8
SalBow5G0058 Salvia bowleyana HOM05D004156 ORTHO05D005259 8.2e-101 371.3 396 52.0
Os04g0685100 Oryza sativa ssp. japonica HOM05D004156 ORTHO05D005259 1.1e-100 370.9 321 61.1
Gohir.D05G018000 Gossypium hirsutum HOM05D004156 ORTHO05D005259 4.1e-100 369.0 259 71.4
BcaNung06338 Brassica carinata HOM05D004156 ORTHO05D005259 5.3e-100 368.6 308 63.6
CDE04G1546 Ceratophyllum demersum HOM05D004156 ORTHO05D005259 9.1e-100 367.9 293 63.8
BcaB01g03735 Brassica carinata HOM05D004156 ORTHO05D005259 1.7e-98 363.6 326 60.1
CiPaw.15G031800 Carya illinoinensis HOM05D004156 ORTHO05D005259 6.1e-96 355.1 303 62.4
Actinidia26780 Actinidia chinensis HOM05D004156 ORTHO05D005259 1.4e-95 354.0 322 61.5
Lalb_Chr07g0178901 Lupinus albus HOM05D004156 ORTHO05D005259 2.6e-94 349.7 292 64.0
SEGI_31652 Sequoiadendron giganteum HOM05D004156 ORTHO05D005259 3.3e-94 349.4 304 58.2
Hund09135 Selenicereus undatus HOM05D004156 ORTHO05D005259 2.4e-92 343.2 341 57.8
Gohir.D08G025232 Gossypium hirsutum HOM05D004156 ORTHO05D005259 4.2e-89 332.4 364 53.6
Zm00001eb337040 Zea mays HOM05D004156 ORTHO05D005259 5.2e-87 325.5 324 56.2
Atru.chr7.1220 Acer truncatum HOM05D004156 ORTHO05D005259 1.3e-82 310.8 310 56.1
Mapoly0036s0028 Marchantia polymorpha HOM05D004156 ORTHO05D005259 7.2e-81 305.1 316 54.4
Sc18g0000640 Simmondsia chinensis HOM05D004156 ORTHO05D005259 1.6e-80 303.9 286 56.6
C03p24730 Brassica napus HOM05D004156 ORTHO05D005259 4.7e-80 302.4 308 56.2
Ca_00137_v3 Cicer arietinum L. HOM05D004156 ORTHO05D000741 1.0e-79 301.2 344 52.9
AagrBONN_evm.TU.Sc2ySwM_368.2845 Anthoceros agrestis HOM05D004156 ORTHO05D005259 8.8e-79 298.1 320 51.6
BraA05t19767Z Brassica rapa HOM05D004156 ORTHO05D005259 2.4e-76 290.0 315 53.3
A05p08010 Brassica napus HOM05D004156 ORTHO05D005259 4.1e-76 289.3 312 53.5
CBR_g18768 Chara braunii HOM05D004156 ORTHO05D005259 8.0e-72 275.0 310 51.3
SMO351G0347 Selaginella moellendorffii HOM05D004156 ORTHO05D005259 1.4e-71 274.2 251 56.6
BcaB02g09228 Brassica carinata HOM05D004156 ORTHO05D005259 4.1e-68 262.7 220 66.4
Pp3c3_32550 Physcomitrium patens HOM05D004156 ORTHO05D005259 9.1e-68 261.5 334 48.5
HanXRQChr06g0181331 Helianthus annuus HOM05D004156 ORTHO05D005259 1.9e-65 253.8 167 75.4
TAR626G0974 Trochodendron aralioides HOM05D004156 ORTHO05D005259 3.3e-65 253.1 173 74.0
BolC4t22574H Brassica oleracea HOM05D004156 ORTHO05D005259 4.7e-64 249.2 265 52.5
Oeu045226.1 Olea europaea HOM05D004156 ORTHO05D005259 4.0e-63 246.1 314 48.4
BcaC02g11942 Brassica carinata HOM05D004156 ORTHO05D005259 9.2e-60 235.0 256 54.3
C04p09670 Brassica napus HOM05D004156 ORTHO05D005259 2.3e-58 230.3 236 56.8
C03p24670 Brassica napus HOM05D004156 ORTHO05D005259 2.7e-51 206.8 150 66.0
BcaC02g11940 Brassica carinata HOM05D004156 ORTHO05D005259 2.3e-50 203.8 176 64.8
Gohir.A08G014600 Gossypium hirsutum HOM05D004156 ORTHO05D005259 7.3e-49 198.7 135 77.8
Nitab4.5_0002556g0050 Nicotiana tabacum HOM05D004156 ORTHO05D005259 4.4e-46 189.5 181 60.2
Cre01.g020950 Chlamydomonas reinhardtii HOM05D004156 ORTHO05D005259 6.4e-45 185.7 306 40.5
TAR383G1033 Trochodendron aralioides HOM05D004156 ORTHO05D005259 7.1e-44 182.2 163 65.0
Os06g0142050 Oryza sativa ssp. japonica HOM05D004156 ORTHO05D005259 1.4e-39 167.9 159 60.4
BcaC09g49789 Brassica carinata HOM05D004156 ORTHO05D005259 1.9e-33 147.5 137 60.6
PRCOL_00002162 Prasinoderma coloniale HOM05D004156 ORTHO05D005259 2.1e-32 144.1 339 33.9
MCO03G226 Micromonas commoda HOM05D004156 ORTHO05D005259 1.8e-31 141.0 321 34.6
Actinidia37158 Actinidia chinensis HOM05D004156 ORTHO05D005259 5.2e-31 139.4 110 69.1
Nn8g39426 Nelumbo nucifera HOM05D004156 ORTHO05D005259 6.4e-21 105.9 67 73.1
BcaNung06017 Brassica carinata HOM05D004156 ORTHO05D005259 9.3e-20 102.1 73 63.0
AagrBONN_evm.TU.Sc2ySwM_228.5043 Anthoceros agrestis HOM05D004156 ORTHO05D005259 1.6e-19 101.3 79 58.2
C01p32910 Brassica napus HOM05D004156 ORTHO05D005259 2.1e-19 100.9 99 58.6
AagrBONN_evm.TU.Sc2ySwM_228.5042 Anthoceros agrestis HOM05D004156 ORTHO05D005259 3.6e-16 90.1 89 51.7
Rhsim11G0147700 Rhododendron simsii HOM05D004156 ORTHO05D338749 1.2e-14 85.1 61 68.9
TAR636G0452 Trochodendron aralioides HOM05D000809 ORTHO05D007735 3.5e-11 73.6 61 63.9
Zm00001eb433790 Zea mays HOM05D003078 ORTHO05D446193 4.3e-09 66.6 56 55.4
Zm00001eb060690 Zea mays HOM05D004156 ORTHO05D005259 3.7e-08 63.5 52 57.7
Psat0s2088g0120 Pisum sativum HOM05D001944 ORTHO05D002405 8.1e-08 62.4 38 84.2
TAR626G1412 Trochodendron aralioides HOM05D004156 ORTHO05D005259 1.2e-06 58.5 109 41.3
Actinidia26746 Actinidia chinensis HOM05D004156 ORTHO05D054118 3.4e-06 57.0 42 59.5
Glyma.20G228801 Glycine max HOM05D004156 ORTHO05D211242 1.0e-05 55.5 71 50.7


User provided reference genes

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