Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G5597 Papaver somniferum HOM05D003810 ORTHO05D004416 0.0e+00 1165.2 600 100.0
PSO063G0853 Papaver somniferum HOM05D003810 ORTHO05D004416 0.0e+00 1151.7 600 98.8
Aqoxy3G00950 Aquilegia oxysepala HOM05D003810 ORTHO05D004416 2.0e-232 809.3 602 68.9
GSVIVG01014785001 Vitis vinifera HOM05D003810 ORTHO05D004416 5.8e-232 807.7 600 70.7
Nn2g14662 Nelumbo nucifera HOM05D003810 ORTHO05D004416 3.3e-227 792.0 602 69.4
CSS0024914 Camellia sinensis var. sinensis HOM05D003810 ORTHO05D004416 1.2e-226 790.0 600 67.7
Rhsim04G0009500 Rhododendron simsii HOM05D003810 ORTHO05D004416 9.3e-222 773.9 602 65.8
ATR0751G036 Amborella trichopoda HOM05D003810 ORTHO05D004416 1.6e-221 773.1 596 68.8
MBI15_g00877_MAGBIO Magnolia biondii HOM05D003810 ORTHO05D004416 2.1e-218 762.7 599 68.8
Hma1.2p1_0193F.1_g084130 Hydrangea macrophylla HOM05D003810 ORTHO05D004416 1.5e-216 756.5 629 64.5
Dinv40895 Davidia involucrata HOM05D003810 ORTHO05D004416 2.2e-215 752.7 581 68.3
Sc14g0003560 Simmondsia chinensis HOM05D003810 ORTHO05D004416 8.4e-215 750.7 602 65.0
Thecc.09G267400 Theobroma cacao HOM05D003810 ORTHO05D004416 3.0e-212 742.3 600 64.5
Aqoxy2G00893 Aquilegia oxysepala HOM05D003810 ORTHO05D004416 6.7e-212 741.1 605 65.5
Actinidia00838 Actinidia chinensis HOM05D003810 ORTHO05D004416 6.2e-210 734.6 551 68.4
vmacro22299 Vaccinium macrocarpon HOM05D003810 ORTHO05D004416 2.0e-208 729.6 669 59.5
MSTRG.13036 Avicennia marina HOM05D003810 ORTHO05D004416 3.4e-208 728.8 599 62.8
Duzib150G1314 Durio zibethinus HOM05D003810 ORTHO05D004416 2.2e-207 726.1 600 63.5
Gohir.D07G118250 Gossypium hirsutum HOM05D003810 ORTHO05D004416 4.6e-205 718.4 600 62.5
HanXRQChr05g0160211 Helianthus annuus HOM05D003810 ORTHO05D004416 1.0e-204 717.2 599 62.8
Nitab4.5_0001622g0070 Nicotiana tabacum HOM05D003810 ORTHO05D004416 1.3e-204 716.8 600 62.7
Gorai.001G127200 Gossypium raimondii HOM05D003810 ORTHO05D004416 1.8e-204 716.5 601 62.6
Ciclev10007802m.g Citrus clementina HOM05D003810 ORTHO05D004416 2.3e-204 716.1 599 63.6
Cfa016940 Carpinus fangiana HOM05D003810 ORTHO05D004416 8.7e-204 714.1 602 62.3
Nitab4.5_0000611g0250 Nicotiana tabacum HOM05D003810 ORTHO05D004416 8.7e-204 714.1 600 62.5
Cc00_g20590 Coffea canephora HOM05D003810 ORTHO05D004416 2.5e-203 712.6 595 62.7
CANSAT11G0157 Cannabis sativa HOM05D003810 ORTHO05D004416 5.3e-201 704.9 597 62.3
MELO3C020474.2 Cucumis melo HOM05D003810 ORTHO05D004416 3.4e-200 702.2 600 62.0
Peaxi162Scf00212g00616 Petunia axillaris HOM05D003810 ORTHO05D004416 3.4e-200 702.2 601 62.2
CsaV3_4G027560 Cucumis sativus L. HOM05D003810 ORTHO05D004416 4.5e-200 701.8 600 62.0
CAN.G492.44 Capsicum annuum HOM05D003810 ORTHO05D004416 5.8e-200 701.4 597 62.5
QL08p001596 Quercus lobata HOM05D003810 ORTHO05D004416 5.8e-200 701.4 615 61.8
Eucgr.J01409 Eucalyptus grandis HOM05D003810 ORTHO05D004416 1.7e-199 699.9 600 61.3
vmacro09609 Vaccinium macrocarpon HOM05D003810 ORTHO05D004416 1.4e-198 696.8 649 58.9
Solyc10g005900.3 Solanum lycopersicum HOM05D003810 ORTHO05D004416 7.1e-198 694.5 600 61.8
Sed0019869 Sechium edule HOM05D003810 ORTHO05D004416 1.6e-197 693.3 600 61.2
Sopen10g001850 Solanum pennellii HOM05D003810 ORTHO05D004416 1.6e-197 693.3 600 61.7
Atru.chr2.3847 Acer truncatum HOM05D003810 ORTHO05D004416 4.6e-197 691.8 601 61.6
PGR042G2745 Punica granatum HOM05D003810 ORTHO05D004416 3.0e-196 689.1 601 60.7
Prupe.1G583500 Prunus persica HOM05D003810 ORTHO05D004416 3.9e-196 688.7 605 61.0
CiPaw.11G208700 Carya illinoinensis HOM05D003810 ORTHO05D004416 8.7e-196 687.6 599 59.9
COL.COLO4_25217 Corchorus olitorius HOM05D003810 ORTHO05D004416 1.5e-195 686.8 600 61.3
CDE04G2581 Ceratophyllum demersum HOM05D003810 ORTHO05D004416 1.3e-194 683.7 603 62.4
AUR62017624 Chenopodium quinoa HOM05D003810 ORTHO05D004416 2.8e-194 682.6 607 61.3
Oeu062684.4 Olea europaea HOM05D003810 ORTHO05D004416 1.8e-193 679.9 692 55.5
Os08g0338200 Oryza sativa ssp. japonica HOM05D003810 ORTHO05D004416 3.1e-193 679.1 601 61.4
RcHm_v2.0_Chr7g0221221 Rosa chinensis HOM05D003810 ORTHO05D004416 9.0e-193 677.6 600 59.3
MD15G1441400 Malus domestica HOM05D003810 ORTHO05D004416 4.5e-192 675.2 598 60.9
Atru.chr12.1053 Acer truncatum HOM05D003810 ORTHO05D004416 1.7e-191 673.3 601 60.6
Ah.01g013210 Amaranthus hybridus HOM05D003810 ORTHO05D004416 3.8e-191 672.2 534 66.1
Migut.H01729 Erythranthe guttata HOM05D003810 ORTHO05D004416 7.2e-190 667.9 601 58.4
Haze_09895 Corylus avellana HOM05D003810 ORTHO05D004416 4.6e-189 665.2 627 58.1
HPP92_028601 Vanilla planifolia HOM05D003810 ORTHO05D004416 8.8e-188 661.0 592 59.6
Carub.0001s4426 Capsella rubella HOM05D003810 ORTHO05D004416 1.5e-187 660.2 600 58.5
EL10Ac9g22878 Beta vulgaris HOM05D003810 ORTHO05D004416 2.5e-187 659.4 600 59.3
Cpa.g.sc181.12 Carica papaya HOM05D003810 ORTHO05D004416 3.1e-185 652.5 565 61.4
ECA246G2898 Erigeron canadensis HOM05D003810 ORTHO05D004416 7.7e-184 647.9 600 57.3
Aa31LG10G490 Aethionema arabicum HOM05D003810 ORTHO05D004416 1.0e-183 647.5 600 57.3
AL1G63840 Arabidopsis lyrata HOM05D003810 ORTHO05D004416 1.0e-183 647.5 600 57.7
Thhalv10011333m.g Eutrema salsugineum HOM05D003810 ORTHO05D004416 6.5e-183 644.8 597 57.6
Lj5g0018758 Lotus japonicus HOM05D003810 ORTHO05D004416 8.5e-183 644.4 598 57.2
THA.LOC104815683 Tarenaya hassleriana HOM05D003810 ORTHO05D004416 8.5e-183 644.4 600 58.0
FAN04G0096 Fragaria x ananassa HOM05D003810 ORTHO05D004416 1.1e-182 644.0 598 57.9
Phvul.007G134900 Phaseolus vulgaris HOM05D003810 ORTHO05D004416 1.9e-182 643.3 599 57.4
ClCG04G003010 Citrullus lanatus HOM05D003810 ORTHO05D004416 7.2e-182 641.3 599 58.6
Lj3A773G17 Lonicera japonica HOM05D003810 ORTHO05D004416 1.2e-181 640.6 613 57.9
CARHR045410 Cardamine hirsuta HOM05D003810 ORTHO05D004416 4.7e-181 638.6 600 56.5
VMungo0720G2836 Vigna mungo HOM05D003810 ORTHO05D004416 8.8e-180 634.4 599 56.8
Glyma.20G197500 Glycine max HOM05D003810 ORTHO05D004416 1.5e-179 633.6 598 55.5
TPR.G13386 Trifolium pratense HOM05D003810 ORTHO05D004416 9.7e-179 630.9 597 57.0
Sp5g24310 Schrenkiella parvula HOM05D003810 ORTHO05D004416 3.7e-178 629.0 600 55.8
Ca_10408_v3 Cicer arietinum L. HOM05D003810 ORTHO05D004416 6.3e-178 628.2 626 54.6
Sabra07G0088100 Salix brachista HOM05D003810 ORTHO05D004416 1.4e-177 627.1 659 53.0
Manes.02G224100 Manihot esculenta HOM05D003810 ORTHO05D004416 1.8e-177 626.7 547 59.8
BcaB05g24435 Brassica carinata HOM05D003810 ORTHO05D004416 2.4e-177 626.3 590 56.4
DCAR_017597 Daucus carota HOM05D003810 ORTHO05D004416 3.1e-177 625.9 617 56.1
Medtr1g090110 Medicago truncatula HOM05D003810 ORTHO05D004416 5.3e-177 625.2 594 55.6
Lsat_1_v5_gn_1_66020 Lactuca sativa HOM05D003810 ORTHO05D004416 7.0e-177 624.8 608 57.4
TWI23G0485 Tripterygium wilfordii HOM05D003810 ORTHO05D004416 9.1e-177 624.4 604 57.5
AUR62015172 Chenopodium quinoa HOM05D003810 ORTHO05D004416 1.2e-176 624.0 607 58.0
Psat6g170400 Pisum sativum HOM05D003810 ORTHO05D004416 7.7e-176 621.3 594 56.7
BcaC03g15064 Brassica carinata HOM05D003810 ORTHO05D004416 2.9e-175 619.4 591 56.3
C02p26210 Brassica napus HOM05D003810 ORTHO05D004416 2.9e-175 619.4 591 56.3
BolC2t08687H Brassica oleracea HOM05D003810 ORTHO05D004416 2.9e-175 619.4 591 56.3
AT3G61420 Arabidopsis thaliana HOM05D003810 ORTHO05D004416 5.0e-175 618.6 583 56.6
A02p15760 Brassica napus HOM05D003810 ORTHO05D004416 1.9e-174 616.7 591 56.0
BraA02t06637Z Brassica rapa HOM05D003810 ORTHO05D004416 2.1e-173 613.2 590 55.4
FAN08G2973 Fragaria x ananassa HOM05D003810 ORTHO05D004416 2.1e-173 613.2 598 56.4
FAN18G3759 Fragaria x ananassa HOM05D003810 ORTHO05D004416 6.7e-172 608.2 721 48.4
arahy.Tifrunner.gnm1.ann1.KKS8QY Arachis hypogaea HOM05D003810 ORTHO05D004416 1.5e-171 607.1 598 54.7
unitig_61.g26129 Utricularia gibba HOM05D003810 ORTHO05D004416 2.0e-171 606.7 596 56.5
Aqoxy7G03331 Aquilegia oxysepala HOM05D003810 ORTHO05D004416 4.4e-171 605.5 477 66.9
SGA_v2.0_scaffold42G15939 Striga asiatica HOM05D003810 ORTHO05D004416 1.7e-170 603.6 668 51.5
AL5G43720 Arabidopsis lyrata HOM05D003810 ORTHO05D004416 1.4e-169 600.5 589 55.0
Dinv10375 Davidia involucrata HOM05D003810 ORTHO05D004416 3.8e-167 592.4 599 57.1
Glyma.10G193000 Glycine max HOM05D003810 ORTHO05D004416 8.5e-167 591.3 598 53.5
FvH4_5g28910 Fragaria vesca HOM05D003810 ORTHO05D004416 5.2e-164 582.0 539 57.1
Lj3C711T10 Lonicera japonica HOM05D003810 ORTHO05D004416 1.3e-162 577.4 490 62.7
Medtr6g071555 Medicago truncatula HOM05D003810 ORTHO05D004416 1.4e-161 573.9 593 52.3
AT1G55750 Arabidopsis thaliana HOM05D003810 ORTHO05D004416 2.4e-161 573.2 546 56.6
arahy.Tifrunner.gnm1.ann1.60T2A8 Arachis hypogaea HOM05D003810 ORTHO05D004416 1.0e-159 567.8 598 52.2
TAR629G3163 Trochodendron aralioides HOM05D003810 ORTHO05D004416 1.0e-159 567.8 457 66.3
Potri.007G107400 Populus trichocarpa HOM05D003810 ORTHO05D004416 3.2e-158 562.8 548 55.7
Duzib168G0397 Durio zibethinus HOM05D003810 ORTHO05D004416 1.5e-155 553.9 427 66.7
Lsat_1_v5_gn_9_33460 Lactuca sativa HOM05D003810 ORTHO05D004416 2.0e-155 553.5 463 63.7
SGA_v2.0_scaffold146G36126 Striga asiatica HOM05D003810 ORTHO05D004416 2.8e-149 533.1 600 50.3
TAR627G1185 Trochodendron aralioides HOM05D003810 ORTHO05D004416 4.9e-146 522.3 369 74.0
Mapoly0009s0093 Marchantia polymorpha HOM05D003810 ORTHO05D004416 9.2e-145 518.1 613 48.8
Zm00001eb172700 Zea mays HOM05D003810 ORTHO05D004416 6.1e-141 505.4 478 57.3
Pp3c26_14480 Physcomitrium patens HOM05D003810 ORTHO05D004416 1.7e-138 497.3 602 46.0
FAN14G4445 Fragaria x ananassa HOM05D003810 ORTHO05D004416 1.2e-136 491.1 610 47.4
AagrBONN_evm.TU.Sc2ySwM_117.3105 Anthoceros agrestis HOM05D003810 ORTHO05D004416 3.6e-133 479.6 600 44.7
Lalb_Chr06g0169751 Lupinus albus HOM05D003810 ORTHO05D004416 2.2e-130 470.3 382 63.4
Lj1A897G41 Lonicera japonica HOM05D003810 ORTHO05D004416 2.7e-128 463.4 413 60.0
Gohir.A07G114448 Gossypium hirsutum HOM05D003810 ORTHO05D004416 8.3e-122 441.8 366 64.2
BcaB07g33855 Brassica carinata HOM05D003810 ORTHO05D004416 8.6e-119 431.8 572 45.5
FvH4_6g25000 Fragaria vesca HOM05D003810 ORTHO05D004416 2.9e-114 416.8 417 54.0
CiPaw.14G066900 Carya illinoinensis HOM05D003810 ORTHO05D004416 4.6e-112 409.5 341 63.0
Prupe.5G213500 Prunus persica HOM05D003810 ORTHO05D004416 3.0e-111 406.8 479 50.7
Thhalv10011448m.g Eutrema salsugineum HOM05D003810 ORTHO05D004416 4.0e-108 396.4 552 45.5
Potri.005G061432 Populus trichocarpa HOM05D003810 ORTHO05D004416 2.0e-107 394.0 374 57.2
CARHR219980 Cardamine hirsuta HOM05D003810 ORTHO05D004416 8.4e-106 388.7 364 58.0
SMO228G0023 Selaginella moellendorffii HOM05D003810 ORTHO05D004416 2.5e-102 377.1 588 40.0
Prupe.5G046900 Prunus persica HOM05D003810 ORTHO05D004416 4.8e-101 372.9 474 48.7
QL04p000617 Quercus lobata HOM05D003810 ORTHO05D004416 4.5e-99 366.3 444 51.6
BcaC08g42928 Brassica carinata HOM05D003810 ORTHO05D004416 1.3e-95 354.8 491 45.8
FAN02G0111 Fragaria x ananassa HOM05D003810 ORTHO05D004416 6.7e-87 325.9 474 43.9
FAN02G0356 Fragaria x ananassa HOM05D003810 ORTHO05D004416 9.6e-86 322.0 441 45.1
MD08G1246300 Malus domestica HOM05D003810 ORTHO05D004416 3.7e-85 320.1 227 71.4
Lj1A897G42 Lonicera japonica HOM05D003810 ORTHO05D004416 3.1e-76 290.4 203 71.4
Gohir.A07G114432 Gossypium hirsutum HOM05D003810 ORTHO05D004416 1.8e-71 274.6 208 63.9
BolC6t35297H Brassica oleracea HOM05D003810 ORTHO05D004416 1.5e-70 271.6 318 49.7
TAR627G1127 Trochodendron aralioides HOM05D003810 ORTHO05D004416 3.3e-70 270.4 178 75.8
Hma1.2p1_2995F.1_g331440 Hydrangea macrophylla HOM05D003810 ORTHO05D004416 4.5e-67 260.0 340 48.2
FAN09G2262 Fragaria x ananassa HOM05D003810 ORTHO05D004416 4.2e-65 253.4 377 42.4
Potri.005G061366 Populus trichocarpa HOM05D003810 ORTHO05D004416 4.2e-65 253.4 205 60.5
FAN05G0299 Fragaria x ananassa HOM05D003810 ORTHO05D010162 1.4e-63 248.4 209 63.6
SHI21694 Sapria himalayana HOM05D003810 ORTHO05D004416 1.8e-60 238.0 269 49.8
Lj3g0026478 Lotus japonicus HOM05D003810 ORTHO05D004416 2.6e-59 234.2 278 47.5
FAN02G2818 Fragaria x ananassa HOM05D003810 ORTHO05D004416 1.7e-58 231.5 248 52.4
CBR_g28523 Chara braunii HOM05D000019 ORTHO05D000002 1.9e-57 228.0 240 50.0
RcHm_v2.0_Chr2g0090241 Rosa chinensis HOM05D003810 ORTHO05D004416 1.5e-54 218.4 481 35.6
Rhsim05G0134800 Rhododendron simsii HOM05D003492 ORTHO05D005115 2.6e-54 217.6 293 46.1
MD08G1246400 Malus domestica HOM05D003810 ORTHO05D004416 8.5e-50 202.6 165 60.0
CAN.G306.2 Capsicum annuum HOM05D003810 ORTHO05D004416 3.6e-48 197.2 168 63.1
CAN.G306.3 Capsicum annuum HOM05D003810 ORTHO05D004416 4.7e-48 196.8 168 63.1
CiPaw.14G066700 Carya illinoinensis HOM05D003810 ORTHO05D004416 4.7e-48 196.8 218 49.5
Lalb_Chr06g0169761 Lupinus albus HOM05D003810 ORTHO05D004416 7.5e-46 189.5 216 47.2
HPP92_016056 Vanilla planifolia HOM05D003810 ORTHO05D004416 3.7e-45 187.2 120 75.0
Hma1.2p1_2995F.1_g331430 Hydrangea macrophylla HOM05D003810 ORTHO05D004416 1.2e-43 182.2 204 52.5
ECA233G1945 Erigeron canadensis HOM05D000449 ORTHO05D003939 5.0e-42 176.8 236 45.8
Hund17709 Selenicereus undatus HOM05D003810 ORTHO05D004416 1.6e-40 171.8 228 45.2
Actinidia03659 Actinidia chinensis HOM05D003810 ORTHO05D004416 5.4e-28 130.2 149 48.3
SMO031G0001 Selaginella moellendorffii HOM05D003810 ORTHO05D004416 1.7e-26 125.2 122 47.5
Oeu005536.2 Olea europaea HOM05D003810 ORTHO05D004416 3.3e-25 120.9 165 47.3
QL12p013194 Quercus lobata HOM05D003810 ORTHO05D004416 9.5e-25 119.4 187 39.0
TPR.G30194 Trifolium pratense HOM05D003810 ORTHO05D004416 2.8e-24 117.9 182 42.3
CAN.G790.44 Capsicum annuum HOM05D000872 ORTHO05D000777 3.1e-23 114.4 272 33.5
TAR629G2180 Trochodendron aralioides HOM05D003810 ORTHO05D004416 1.5e-22 112.1 64 82.8
MCO14G434 Micromonas commoda HOM05D003810 ORTHO05D004416 2.0e-22 111.7 737 22.5
SalBow3G3831 Salvia bowleyana HOM05D003810 ORTHO05D004416 2.6e-22 111.3 131 49.6
SGA_v2.0_scaffold126G33829 Striga asiatica HOM05D003810 ORTHO05D004416 3.7e-21 107.5 173 39.9
PRCOL_00004489 Prasinoderma coloniale HOM05D003810 ORTHO05D004416 1.1e-20 105.9 573 25.1
Sabra05G0051600 Salix brachista HOM05D003810 ORTHO05D004416 7.0e-20 103.2 207 37.7
CAN.G1328.7 Capsicum annuum HOM05D003810 ORTHO05D004416 2.0e-19 101.7 76 67.1
CAN.G312.5 Capsicum annuum HOM05D003810 ORTHO05D000001 4.6e-19 100.5 161 42.2
CAN.G1057.19 Capsicum annuum HOM05D000222 ORTHO05D004416 1.0e-18 99.4 77 63.6
CAN.G289.45 Capsicum annuum HOM05D002177 ORTHO05D004416 1.7e-18 98.6 80 61.2
Hund08475 Selenicereus undatus HOM05D000185 ORTHO05D000105 3.1e-15 87.8 83 59.0
ClCG09G022970 Citrullus lanatus HOM05D003810 ORTHO05D004416 2.0e-14 85.1 60 68.3
SHI21696 Sapria himalayana HOM05D003810 ORTHO05D004416 7.5e-14 83.2 108 46.3
CAN.G11.19 Capsicum annuum HOM05D003810 ORTHO05D004416 2.7e-11 74.7 56 62.5
CAN.G479.68 Capsicum annuum HOM05D000222 ORTHO05D004387 3.5e-11 74.3 53 67.9
SalBow3G0229 Salvia bowleyana HOM05D003810 ORTHO05D004416 3.5e-11 74.3 73 53.4
SHI21692 Sapria himalayana HOM05D003810 ORTHO05D004416 6.0e-11 73.6 104 36.5
Cre10.g466550 Chlamydomonas reinhardtii HOM05D003810 ORTHO05D004416 7.8e-11 73.2 141 34.8
CDE07G1690 Ceratophyllum demersum HOM05D003810 ORTHO05D004416 3.0e-10 71.2 76 52.6
Nitab4.5_0001303g0160 Nicotiana tabacum HOM05D003810 ORTHO05D004416 2.5e-09 68.2 45 73.3
TPR.G30768 Trifolium pratense HOM05D003810 ORTHO05D004416 5.6e-09 67.0 56 60.7
CAN.G1077.9 Capsicum annuum HOM05D000222 ORTHO05D012343 9.5e-09 66.2 146 34.2
MD08G1246200 Malus domestica HOM05D003810 ORTHO05D004416 2.8e-08 64.7 150 32.7
Hund17711 Selenicereus undatus HOM05D003810 ORTHO05D004416 6.2e-08 63.5 42 71.4
A07p35570 Brassica napus HOM05D003810 ORTHO05D004416 2.3e-07 61.6 50 58.0
BraA07t31145Z Brassica rapa HOM05D003810 ORTHO05D004416 2.3e-07 61.6 50 58.0
Actinidia36698 Actinidia chinensis HOM05D004019 ORTHO05D005136 3.1e-07 61.2 209 32.5
CAN.G523.5 Capsicum annuum HOM05D000222 ORTHO05D012343 8.9e-07 59.7 63 52.4
MD08G1246500 Malus domestica HOM05D003810 ORTHO05D004416 9.9e-06 56.2 34 76.5


User provided reference genes

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