Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G5186 Papaver somniferum HOM05D005745 ORTHO05D006857 3.1e-251 871.3 435 100.0
PSO478G4474 Papaver somniferum HOM05D005745 ORTHO05D006857 1.1e-235 819.7 435 93.3
TAR367G0002 Trochodendron aralioides HOM05D005745 ORTHO05D006857 1.5e-141 506.9 439 60.8
Nn6g33496 Nelumbo nucifera HOM05D005745 ORTHO05D006857 1.6e-138 496.9 423 60.3
CSS0024424 Camellia sinensis var. sinensis HOM05D005745 ORTHO05D006857 2.7e-138 496.1 437 59.5
GSVIVG01026870001 Vitis vinifera HOM05D005745 ORTHO05D006857 4.6e-138 495.4 453 58.3
CSS0038489 Camellia sinensis var. sinensis HOM05D005745 ORTHO05D006857 6.7e-137 491.5 437 59.3
Dinv43791 Davidia involucrata HOM05D005745 ORTHO05D006857 2.1e-135 486.5 436 58.5
Actinidia20926 Actinidia chinensis HOM05D005745 ORTHO05D006857 8.1e-135 484.6 429 58.5
Hma1.2p1_0001F.1_g001520 Hydrangea macrophylla HOM05D005745 ORTHO05D006857 2.0e-133 479.9 422 58.1
Actinidia10034 Actinidia chinensis HOM05D005745 ORTHO05D006857 2.6e-133 479.6 440 58.4
Aqoxy7G00357 Aquilegia oxysepala HOM05D005745 ORTHO05D006857 1.0e-132 477.6 435 57.9
Manes.01G259400 Manihot esculenta HOM05D005745 ORTHO05D006857 1.7e-132 476.9 420 59.3
vmacro13297 Vaccinium macrocarpon HOM05D005745 ORTHO05D006857 1.9e-131 473.4 445 57.8
Sabra14G0059300 Salix brachista HOM05D005745 ORTHO05D006857 1.2e-130 470.7 428 57.5
Ciclev10020429m.g Citrus clementina HOM05D005745 ORTHO05D006857 1.3e-129 467.2 405 60.7
Cpa.g.sc18.234 Carica papaya HOM05D005745 ORTHO05D006857 1.1e-128 464.2 432 56.5
Rhsim07G0017300 Rhododendron simsii HOM05D000683 ORTHO05D000507 1.9e-128 463.4 433 57.7
QL08p049437 Quercus lobata HOM05D005745 ORTHO05D006857 4.3e-128 462.2 429 56.4
Medtr8g031440 Medicago truncatula HOM05D005745 ORTHO05D006857 5.3e-126 455.3 417 57.1
FAN10G4182 Fragaria x ananassa HOM05D005745 ORTHO05D006857 1.5e-125 453.8 415 55.7
CiPaw.02G029400 Carya illinoinensis HOM05D005745 ORTHO05D006857 7.6e-125 451.4 426 56.3
FAN06G1549 Fragaria x ananassa HOM05D005745 ORTHO05D006857 7.6e-125 451.4 436 54.1
Lj3g0021692 Lotus japonicus HOM05D005745 ORTHO05D006857 7.6e-125 451.4 428 56.3
VMungo0331G1900 Vigna mungo HOM05D005745 ORTHO05D006857 1.0e-124 451.1 426 56.1
arahy.Tifrunner.gnm1.ann1.5YG8M2 Arachis hypogaea HOM05D005745 ORTHO05D006857 2.2e-124 449.9 426 56.1
PGR042G0923 Punica granatum HOM05D005745 ORTHO05D006857 4.2e-123 445.7 424 54.5
Cfa003949 Carpinus fangiana HOM05D000683 ORTHO05D000507 9.3e-123 444.5 388 59.5
arahy.Tifrunner.gnm1.ann1.JLYP5G Arachis hypogaea HOM05D005745 ORTHO05D006857 4.6e-122 442.2 426 55.2
Lalb_Chr04g0256771 Lupinus albus HOM05D005745 ORTHO05D006857 6.1e-122 441.8 440 54.3
Thhalv10007725m.g Eutrema salsugineum HOM05D005745 ORTHO05D006857 1.8e-121 440.3 418 56.0
MD01G1055100 Malus domestica HOM05D005745 ORTHO05D006857 5.1e-121 438.7 436 52.8
AL1G10580 Arabidopsis lyrata HOM05D005745 ORTHO05D006857 6.7e-121 438.3 422 55.0
CARHR000560 Cardamine hirsuta HOM05D005745 ORTHO05D006857 8.7e-121 438.0 420 55.7
CANSAT56G0536 Cannabis sativa HOM05D005745 ORTHO05D006857 1.9e-120 436.8 432 54.4
Haze_15472 Corylus avellana HOM05D005745 ORTHO05D006857 3.3e-120 436.0 416 55.8
TWI23G0914 Tripterygium wilfordii HOM05D005745 ORTHO05D006857 3.3e-120 436.0 454 52.0
Cc02_g37770 Coffea canephora HOM05D005745 ORTHO05D006857 5.7e-120 435.3 419 53.9
Gohir.D12G109300 Gossypium hirsutum HOM05D005745 ORTHO05D006857 2.2e-119 433.3 423 52.2
BcaB03g13612 Brassica carinata HOM05D005745 ORTHO05D006857 2.8e-119 433.0 420 56.4
DCAR_015932 Daucus carota HOM05D005745 ORTHO05D006857 2.8e-119 433.0 420 54.0
Gohir.A12G105400 Gossypium hirsutum HOM05D005745 ORTHO05D006857 6.3e-119 431.8 423 52.0
Gorai.008G118400 Gossypium raimondii HOM05D005745 ORTHO05D006857 6.3e-119 431.8 423 52.0
A10p00280 Brassica napus HOM05D005745 ORTHO05D006857 5.3e-118 428.7 423 54.6
PGSC0003DMG400021653 Solanum tuberosum HOM05D005745 ORTHO05D006857 2.0e-117 426.8 433 51.3
Solyc05g048810.4 Solanum lycopersicum HOM05D005745 ORTHO05D006857 2.6e-117 426.4 435 51.5
MSTRG.17255 Avicennia marina HOM05D005745 ORTHO05D006857 1.7e-116 423.7 444 52.0
Aa31LG1G11130 Aethionema arabicum HOM05D005745 ORTHO05D006857 2.9e-116 422.9 457 51.6
EL10Ac1g00543 Beta vulgaris HOM05D005745 ORTHO05D006857 3.8e-116 422.5 418 53.6
Sopen05g028140 Solanum pennellii HOM05D005745 ORTHO05D006857 3.8e-116 422.5 433 51.0
AT1G01760 Arabidopsis thaliana HOM05D005745 ORTHO05D006857 6.5e-116 421.8 393 57.3
CiPaw.02G029100 Carya illinoinensis HOM05D005745 ORTHO05D006857 6.5e-116 421.8 429 53.8
CsaV3_6G000430 Cucumis sativus L. HOM05D005745 ORTHO05D006857 1.1e-115 421.0 431 53.6
Sp1g00540 Schrenkiella parvula HOM05D005745 ORTHO05D006857 1.1e-115 421.0 433 52.9
BraA10t42305Z Brassica rapa HOM05D005745 ORTHO05D006857 1.9e-115 420.2 444 52.5
ECA236G3051 Erigeron canadensis HOM05D005745 ORTHO05D006857 3.2e-115 419.5 430 53.5
Sc26g0000960 Simmondsia chinensis HOM05D005745 ORTHO05D006857 1.2e-114 417.5 424 54.0
Lsat_1_v5_gn_7_5060 Lactuca sativa HOM05D005745 ORTHO05D006857 1.6e-114 417.2 424 52.8
Lalb_Chr10g0097191 Lupinus albus HOM05D005745 ORTHO05D006857 1.6e-114 417.2 435 52.0
Carub.0001s0045 Capsella rubella HOM05D005745 ORTHO05D006857 2.7e-114 416.4 418 53.6
Hund27291 Selenicereus undatus HOM05D005745 ORTHO05D006857 2.7e-114 416.4 434 51.6
CAN.G1535.1 Capsicum annuum HOM05D005745 ORTHO05D006857 6.1e-114 415.2 425 50.8
Oeu056358.1 Olea europaea HOM05D005745 ORTHO05D006857 1.8e-113 413.7 392 55.4
SGA_v2.0_scaffold277G46666 Striga asiatica HOM05D005745 ORTHO05D006857 1.8e-113 413.7 417 54.7
AUR62033312 Chenopodium quinoa HOM05D005745 ORTHO05D006857 2.3e-113 413.3 429 51.0
Potri.014G081400 Populus trichocarpa HOM05D005745 ORTHO05D006857 5.1e-113 412.1 363 59.0
Duzib138G1514 Durio zibethinus HOM05D005745 ORTHO05D006857 6.7e-113 411.8 371 58.2
BolC5t28819H Brassica oleracea HOM05D005745 ORTHO05D006857 8.8e-113 411.4 422 54.0
AUR62033347 Chenopodium quinoa HOM05D005745 ORTHO05D006857 1.5e-112 410.6 425 51.3
C05p00290 Brassica napus HOM05D005745 ORTHO05D006857 5.7e-112 408.7 437 52.4
Nitab4.5_0007346g0010 Nicotiana tabacum HOM05D005745 ORTHO05D006857 9.7e-112 407.9 457 49.2
THA.LOC104817020 Tarenaya hassleriana HOM05D005745 ORTHO05D006857 9.7e-112 407.9 393 56.2
Lj7C516G5 Lonicera japonica HOM05D005745 ORTHO05D006857 1.3e-111 407.5 388 56.4
Peaxi162Scf00191g01322 Petunia axillaris HOM05D005745 ORTHO05D006857 6.9e-110 401.7 424 50.0
ClCG06G003860 Citrullus lanatus HOM05D005745 ORTHO05D006857 1.2e-109 401.0 391 56.0
MBI17_g21972_MAGBIO Magnolia biondii HOM05D005745 ORTHO05D006857 3.8e-108 396.0 381 55.4
Eucgr.E00173 Eucalyptus grandis HOM05D005745 ORTHO05D006857 1.4e-107 394.0 427 49.2
Eucgr.E00169 Eucalyptus grandis HOM05D005745 ORTHO05D006857 1.6e-106 390.6 427 48.7
Ca_23656_v3 Cicer arietinum L. HOM05D005745 ORTHO05D006857 1.7e-103 380.6 381 53.8
Sed0009525 Sechium edule HOM05D005745 ORTHO05D006857 1.1e-102 377.9 364 54.7
FAN03G1898 Fragaria x ananassa HOM05D005745 ORTHO05D006857 1.8e-102 377.1 418 48.8
AUR62004330 Chenopodium quinoa HOM05D005745 ORTHO05D006857 2.2e-100 370.2 434 47.0
HanXRQChr04g0121611 Helianthus annuus HOM05D005745 ORTHO05D006857 2.2e-100 370.2 369 53.1
Ah.05g176680 Amaranthus hybridus HOM05D005745 ORTHO05D006857 9.4e-99 364.8 399 49.9
CiPaw.02G029200 Carya illinoinensis HOM05D005745 ORTHO05D006857 6.1e-98 362.1 366 54.4
MBI18_g01486_MAGBIO Magnolia biondii HOM05D005745 ORTHO05D006857 2.3e-97 360.1 393 50.9
RcHm_v2.0_Chr1g0354081 Rosa chinensis HOM05D005745 ORTHO05D006857 6.7e-97 358.6 452 45.4
Prupe.2G164800 Prunus persica HOM05D005745 ORTHO05D006857 1.7e-95 354.0 345 55.4
HPP92_001499 Vanilla planifolia HOM05D005745 ORTHO05D006857 7.7e-93 345.1 393 48.9
Gohir.A12G105450 Gossypium hirsutum HOM05D005745 ORTHO05D006857 1.2e-90 337.8 362 48.9
Nitab4.5_0002262g0010 Nicotiana tabacum HOM05D005745 ORTHO05D006857 3.7e-87 326.2 435 44.1
Glyma.07G073300 Glycine max HOM05D005745 ORTHO05D006857 2.4e-86 323.6 318 55.0
Zm00001eb067600 Zea mays HOM05D005745 ORTHO05D006857 3.1e-86 323.2 420 44.5
CDE06G1611 Ceratophyllum demersum HOM05D005745 ORTHO05D006857 3.5e-85 319.7 432 44.9
FvH4_7g13861 Fragaria vesca HOM05D005745 ORTHO05D006857 3.5e-85 319.7 342 49.7
Mapoly0023s0060 Marchantia polymorpha HOM05D005745 ORTHO05D006857 7.5e-80 302.0 530 37.2
MELO3C021221.2 Cucumis melo HOM05D005745 ORTHO05D006857 1.2e-77 294.7 391 45.5
Pp3c4_14060 Physcomitrium patens HOM05D005745 ORTHO05D006857 1.6e-77 294.3 524 37.2
Psat4g154320 Pisum sativum HOM05D005745 ORTHO05D006857 8.6e-76 288.5 278 54.7
Atru.BG.56.p Acer truncatum HOM05D005745 ORTHO05D006857 1.9e-75 287.3 354 46.9
TPR.G39633 Trifolium pratense HOM05D005745 ORTHO05D006857 2.5e-75 287.0 222 62.2
Phvul.010G096200 Phaseolus vulgaris HOM05D005745 ORTHO05D006857 2.6e-72 276.9 278 52.9
FAN06G0933 Fragaria x ananassa HOM05D005745 ORTHO05D006857 3.4e-72 276.6 306 52.0
AagrBONN_evm.TU.Sc2ySwM_362.160 Anthoceros agrestis HOM05D005745 ORTHO05D006857 3.5e-69 266.5 446 38.3
Thecc.01G362500 Theobroma cacao HOM05D005745 ORTHO05D006857 2.2e-63 247.3 282 50.4
ATR0594G105 Amborella trichopoda HOM05D005745 ORTHO05D006857 3.7e-63 246.5 220 55.9
Os04g0683500 Oryza sativa ssp. japonica HOM05D005745 ORTHO05D006857 1.6e-61 241.1 317 42.9
SHI13462 Sapria himalayana HOM05D005745 ORTHO05D006857 3.0e-60 236.9 424 40.1
AUR62003100 Chenopodium quinoa HOM05D005745 ORTHO05D006857 5.6e-59 232.6 182 61.5
AUR62034353 Chenopodium quinoa HOM05D005745 ORTHO05D006857 2.1e-58 230.7 187 59.4
Glyma.03G013600 Glycine max HOM05D005745 ORTHO05D006857 4.0e-57 226.5 278 47.5
Zm00001eb420790 Zea mays HOM05D005745 ORTHO05D006857 1.2e-56 224.9 218 50.9
Prupe.2G165000 Prunus persica HOM05D005745 ORTHO05D006857 2.9e-55 220.3 436 36.2
unitig_26.g9734 Utricularia gibba HOM05D005745 ORTHO05D006857 4.7e-50 203.0 361 38.5
MD07G1140200 Malus domestica HOM05D005745 ORTHO05D006857 1.4e-49 201.4 309 42.1
TPR.G4413 Trifolium pratense HOM05D005745 ORTHO05D006857 2.2e-47 194.1 161 60.9
Zm00001eb191880 Zea mays HOM05D009386 ORTHO05D006857 1.1e-43 181.8 184 51.6
Oeu056357.1 Olea europaea HOM05D005745 ORTHO05D006857 2.1e-42 177.6 154 55.8
MCO02G004 Micromonas commoda HOM05D005745 ORTHO05D006857 2.8e-42 177.2 435 33.1
SMO266G0032 Selaginella moellendorffii HOM05D005745 ORTHO05D006857 1.5e-40 171.4 233 45.5
SEGI_32011 Sequoiadendron giganteum HOM05D005745 ORTHO05D006857 2.3e-36 157.5 193 45.1
AUR62034238 Chenopodium quinoa HOM05D002177 ORTHO05D002257 2.9e-31 140.6 114 59.6
PRCOL_00000230 Prasinoderma coloniale HOM05D005745 ORTHO05D006857 3.8e-31 140.2 420 29.5
Atru.chr5.475 Acer truncatum HOM05D005745 ORTHO05D006857 4.9e-31 139.8 93 73.1
Glyma.03G013550 Glycine max HOM05D005745 ORTHO05D006857 8.4e-31 139.0 89 73.0
AUR62019766 Chenopodium quinoa HOM05D005745 ORTHO05D006857 1.4e-30 138.3 111 58.6
CBR_g12518 Chara braunii HOM05D004914 ORTHO05D006512 3.2e-30 137.1 821 22.7
Prupe.2G164500 Prunus persica HOM05D005745 ORTHO05D006857 9.3e-30 135.6 153 51.6
Zm00001eb442120 Zea mays HOM05D009386 ORTHO05D006857 3.0e-28 130.6 126 51.6
EL10Ac7g17708 Beta vulgaris HOM05D005745 ORTHO05D006857 1.9e-27 127.9 86 70.9
SEGI_32349 Sequoiadendron giganteum HOM05D005745 ORTHO05D006857 2.5e-27 127.5 85 69.4
Oeu056356.1 Olea europaea HOM05D005745 ORTHO05D006857 4.3e-27 126.7 85 68.2
FAN01G0854 Fragaria x ananassa HOM05D005745 ORTHO05D006857 1.4e-25 121.7 154 47.4
COL.COLO4_12683 Corchorus olitorius HOM05D000683 ORTHO05D000507 1.1e-19 102.1 135 43.7
Cre14.g629283 Chlamydomonas reinhardtii HOM05D005745 ORTHO05D006857 7.6e-16 89.4 106 47.2
MCO15G493 Micromonas commoda HOM05D005745 ORTHO05D006857 7.6e-16 89.4 348 29.0
PRCOL_00001873 Prasinoderma coloniale HOM05D005745 ORTHO05D006857 3.0e-12 77.4 297 26.9
MCO14G396 Micromonas commoda HOM05D005745 ORTHO05D006857 3.9e-12 77.0 239 29.3
ATR0594G209 Amborella trichopoda HOM05D005745 ORTHO05D006857 9.3e-06 55.8 33 72.7


User provided reference genes

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