Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G3339 Papaver somniferum HOM05D005933 ORTHO05D007366 2.4e-270 934.9 463 100.0
Aqoxy5G03564 Aquilegia oxysepala HOM05D005933 ORTHO05D007366 6.0e-160 568.2 477 63.9
GSVIVG01033275001 Vitis vinifera HOM05D005933 ORTHO05D007366 3.6e-149 532.3 484 60.3
Actinidia39225 Actinidia chinensis HOM05D005933 ORTHO05D007366 2.2e-146 523.1 486 59.1
Hma1.2p1_2002F.1_g310760 Hydrangea macrophylla HOM05D005933 ORTHO05D007366 1.1e-145 520.8 485 58.4
Actinidia09329 Actinidia chinensis HOM05D005933 ORTHO05D007366 1.9e-142 510.0 486 57.8
Haze_19854 Corylus avellana HOM05D005933 ORTHO05D007366 2.5e-142 509.6 461 59.9
QL07p000522 Quercus lobata HOM05D005933 ORTHO05D007366 2.8e-141 506.1 466 58.4
Duzib093G2041 Durio zibethinus HOM05D005933 ORTHO05D007366 1.1e-140 504.2 468 56.8
Ciclev10004945m.g Citrus clementina HOM05D005933 ORTHO05D007366 8.9e-140 501.1 469 57.4
QL07p000555 Quercus lobata HOM05D005933 ORTHO05D007366 1.5e-139 500.4 468 57.7
Thecc.05G153300 Theobroma cacao HOM05D005933 ORTHO05D007366 2.2e-138 496.5 472 55.9
COL.COLO4_28284 Corchorus olitorius HOM05D005933 ORTHO05D007366 2.9e-138 496.1 465 56.6
Lsat_1_v5_gn_8_81281 Lactuca sativa HOM05D005933 ORTHO05D007366 1.1e-137 494.2 477 56.4
CSS0022562 Camellia sinensis var. sinensis HOM05D005933 ORTHO05D007366 4.2e-137 492.3 482 57.5
DCAR_009061 Daucus carota HOM05D005933 ORTHO05D007366 2.7e-136 489.6 488 55.7
vmacro07854 Vaccinium macrocarpon HOM05D005933 ORTHO05D007366 1.0e-135 487.6 514 54.7
ECA236G1702 Erigeron canadensis HOM05D005933 ORTHO05D007366 2.3e-135 486.5 470 56.6
TWI74G0083 Tripterygium wilfordii HOM05D005933 ORTHO05D007366 6.6e-135 485.0 478 53.6
Rhsim03G0022400 Rhododendron simsii HOM05D005933 ORTHO05D007366 8.7e-135 484.6 476 55.9
CiPaw.08G166600 Carya illinoinensis HOM05D005933 ORTHO05D007366 1.1e-134 484.2 471 57.1
Ca_08457_v3 Cicer arietinum L. HOM05D005933 ORTHO05D007366 2.5e-134 483.0 470 56.2
Gohir.D11G173800 Gossypium hirsutum HOM05D005933 ORTHO05D007366 7.3e-134 481.5 470 55.7
Gohir.A11G167500 Gossypium hirsutum HOM05D005933 ORTHO05D007366 1.6e-133 480.3 470 55.5
Rhsim03G0021100 Rhododendron simsii HOM05D005933 ORTHO05D007366 1.6e-133 480.3 474 55.9
Gorai.007G186200 Gossypium raimondii HOM05D005933 ORTHO05D007366 2.1e-133 479.9 470 55.7
Lj1g0013042 Lotus japonicus HOM05D005933 ORTHO05D007366 8.1e-133 478.0 470 55.5
Medtr7g091500 Medicago truncatula HOM05D005933 ORTHO05D007366 8.1e-133 478.0 470 55.5
Phvul.001G132100 Phaseolus vulgaris HOM05D005933 ORTHO05D007366 1.8e-132 476.9 467 54.8
CANSAT78G0457 Cannabis sativa HOM05D005933 ORTHO05D007366 2.4e-132 476.5 484 54.8
Cc06_g17560 Coffea canephora HOM05D005933 ORTHO05D007366 2.4e-132 476.5 502 52.4
Solyc10g080110.3 Solanum lycopersicum HOM05D005933 ORTHO05D007366 2.4e-132 476.5 491 53.6
HanXRQChr09g0252561 Helianthus annuus HOM05D005933 ORTHO05D007366 3.1e-132 476.1 475 55.2
arahy.Tifrunner.gnm1.ann1.T110QE Arachis hypogaea HOM05D005933 ORTHO05D007366 4.0e-132 475.7 472 55.1
arahy.Tifrunner.gnm1.ann1.EHL0AN Arachis hypogaea HOM05D005933 ORTHO05D007366 9.0e-132 474.6 472 55.1
Sopen10g030730 Solanum pennellii HOM05D005933 ORTHO05D007366 9.0e-132 474.6 491 53.4
Lalb_Chr25g0287121 Lupinus albus HOM05D005933 ORTHO05D007366 3.4e-131 472.6 464 55.2
FvH4_6g23820 Fragaria vesca HOM05D005933 ORTHO05D007366 1.3e-130 470.7 469 55.4
PGSC0003DMG400023688 Solanum tuberosum HOM05D005933 ORTHO05D007366 1.3e-130 470.7 494 53.2
FAN05G5216 Fragaria x ananassa HOM05D005933 ORTHO05D007366 2.2e-130 469.9 473 55.2
Peaxi162Scf00618g00022 Petunia axillaris HOM05D005933 ORTHO05D007366 2.9e-130 469.5 473 53.1
Lju124A41G42 Lonicera japonica HOM05D005933 ORTHO05D007366 6.4e-130 468.4 438 56.8
Glyma.03G136900 Glycine max HOM05D005933 ORTHO05D007366 1.1e-129 467.6 470 54.3
Eucgr.A02347 Eucalyptus grandis HOM05D005933 ORTHO05D007366 4.2e-129 465.7 472 53.4
FAN02G2268 Fragaria x ananassa HOM05D005933 ORTHO05D007366 4.2e-129 465.7 473 55.0
MD12G1074000 Malus domestica HOM05D005933 ORTHO05D007366 9.3e-129 464.5 482 54.4
Cpa.g.sc92.52 Carica papaya HOM05D005933 ORTHO05D007366 1.0e-127 461.1 459 53.6
MSTRG.19860 Avicennia marina HOM05D005933 ORTHO05D007366 3.9e-127 459.1 490 51.6
Potri.006G051300 Populus trichocarpa HOM05D005933 ORTHO05D007366 3.9e-127 459.1 474 54.2
Sabra06G0036000 Salix brachista HOM05D005933 ORTHO05D007366 3.9e-127 459.1 463 55.1
RcHm_v2.0_Chr3g0482381 Rosa chinensis HOM05D005933 ORTHO05D007366 1.1e-126 457.6 482 52.5
THA.LOC104811196 Tarenaya hassleriana HOM05D005933 ORTHO05D007366 1.5e-126 457.2 469 52.9
EL10Ac3g07091 Beta vulgaris HOM05D005933 ORTHO05D007366 1.9e-126 456.8 477 51.6
PGR004G0721 Punica granatum HOM05D005933 ORTHO05D007366 2.5e-126 456.4 479 52.6
Hund05286 Selenicereus undatus HOM05D005933 ORTHO05D007366 5.6e-126 455.3 438 56.6
TPR.G854 Trifolium pratense HOM05D005933 ORTHO05D007366 3.6e-125 452.6 407 60.0
Oeu017944.1 Olea europaea HOM05D005933 ORTHO05D007366 1.4e-124 450.7 477 52.8
MELO3C009712.2 Cucumis melo HOM05D005933 ORTHO05D007366 5.3e-124 448.7 484 51.4
AUR62026040 Chenopodium quinoa HOM05D005933 ORTHO05D007366 6.9e-124 448.4 466 51.5
FAN14G1069 Fragaria x ananassa HOM05D005933 ORTHO05D007366 1.5e-123 447.2 447 54.6
Sed0001053 Sechium edule HOM05D005933 ORTHO05D007366 2.6e-123 446.4 469 52.0
Psat3g072720 Pisum sativum HOM05D005933 ORTHO05D007366 4.5e-123 445.7 441 55.3
Migut.J01758 Erythranthe guttata HOM05D005933 ORTHO05D007366 5.8e-123 445.3 491 52.5
Manes.09G022000 Manihot esculenta HOM05D005933 ORTHO05D007366 5.8e-123 445.3 448 53.6
CsaV3_3G039700 Cucumis sativus L. HOM05D005933 ORTHO05D007366 7.6e-123 444.9 483 50.9
Dinv39604 Davidia involucrata HOM05D005933 ORTHO05D007366 9.9e-123 444.5 395 61.0
Nitab4.5_0008648g0010 Nicotiana tabacum HOM05D005933 ORTHO05D007366 1.4e-121 440.7 510 48.6
SalBow6G0452 Salvia bowleyana HOM05D005933 ORTHO05D007366 1.4e-121 440.7 460 54.1
A01p02040 Brassica napus HOM05D005933 ORTHO05D007366 2.4e-121 439.9 471 51.8
C01p02220 Brassica napus HOM05D005933 ORTHO05D007366 3.2e-121 439.5 471 51.4
CARHR244310 Cardamine hirsuta HOM05D005933 ORTHO05D007366 4.2e-121 439.1 467 51.2
Thhalv10025158m.g Eutrema salsugineum HOM05D005933 ORTHO05D007366 5.5e-121 438.7 471 51.4
AT4G35910 Arabidopsis thaliana HOM05D005933 ORTHO05D007366 2.7e-120 436.4 468 49.4
Carub.0007s0431 Capsella rubella HOM05D005933 ORTHO05D007366 4.6e-120 435.6 469 50.5
BolC1t00214H Brassica oleracea HOM05D005933 ORTHO05D007366 6.0e-120 435.3 471 51.2
BraA01t00193Z Brassica rapa HOM05D005933 ORTHO05D007366 1.8e-119 433.7 468 51.1
Aa31LG6G13690 Aethionema arabicum HOM05D005933 ORTHO05D007366 3.9e-119 432.6 468 50.2
ATR0686G233 Amborella trichopoda HOM05D005933 ORTHO05D007366 8.7e-119 431.4 469 51.2
Hma1.2p1_2002F.1_g310770 Hydrangea macrophylla HOM05D005933 ORTHO05D007366 1.9e-118 430.3 373 61.7
Sp7g34530 Schrenkiella parvula HOM05D005933 ORTHO05D007366 5.6e-118 428.7 474 50.4
MBI16_g31719_MAGBIO Magnolia biondii HOM05D005933 ORTHO05D007366 7.4e-118 428.3 465 52.5
ClCG10G016640 Citrullus lanatus HOM05D005933 ORTHO05D007366 9.6e-118 427.9 469 51.0
VMungo1383G3081 Vigna mungo HOM05D005933 ORTHO05D007366 1.6e-117 427.2 568 44.2
AL7G15130 Arabidopsis lyrata HOM05D005933 ORTHO05D007366 2.8e-117 426.4 469 48.8
Nitab4.5_0009442g0020 Nicotiana tabacum HOM05D005933 ORTHO05D007366 1.1e-116 424.5 478 50.0
CAN.G128.8 Capsicum annuum HOM05D005933 ORTHO05D007366 4.0e-116 422.5 388 58.0
BcaNung03520 Brassica carinata HOM05D005933 ORTHO05D007366 1.2e-115 421.0 467 50.5
SGA_v2.0_scaffold69G23116 Striga asiatica HOM05D005933 ORTHO05D007366 2.6e-115 419.9 474 49.2
Atru.chr1.1098 Acer truncatum HOM05D005933 ORTHO05D007366 8.4e-114 414.8 411 54.5
Cfa008569 Carpinus fangiana HOM05D005933 ORTHO05D007366 8.4e-114 414.8 336 64.9
AUR62024451 Chenopodium quinoa HOM05D005933 ORTHO05D007366 1.8e-111 407.1 501 46.9
Peaxi162Scf00354g00225 Petunia axillaris HOM05D005933 ORTHO05D007366 2.3e-111 406.8 440 50.9
Ah.13g075070 Amaranthus hybridus HOM05D005933 ORTHO05D007366 2.1e-109 400.2 449 49.2
Os12g0588900 Oryza sativa ssp. japonica HOM05D005933 ORTHO05D007366 4.6e-104 382.5 479 47.0
SEGI_18184 Sequoiadendron giganteum HOM05D005933 ORTHO05D007366 7.7e-99 365.2 477 43.2
unitig_749.g14146 Utricularia gibba HOM05D003650 ORTHO05D004213 9.4e-97 358.2 472 46.2
Oeu008914.1 Olea europaea HOM05D005933 ORTHO05D007366 4.6e-96 355.9 361 56.0
Oeu008916.1 Olea europaea HOM05D005933 ORTHO05D007366 4.6e-96 355.9 361 56.0
Zm00001eb135000 Zea mays HOM05D005933 ORTHO05D007366 2.2e-93 347.1 471 43.3
Prupe.7G060900 Prunus persica HOM05D005933 ORTHO05D007366 4.8e-93 345.9 322 55.9
HPP92_017763 Vanilla planifolia HOM05D005933 ORTHO05D007366 8.5e-90 335.1 359 54.0
TAR633G2718 Trochodendron aralioides HOM05D005933 ORTHO05D007366 1.0e-87 328.2 242 70.7
Sc13g0001740 Simmondsia chinensis HOM05D005933 ORTHO05D007366 2.0e-83 313.9 290 54.8
CDE09G0169 Ceratophyllum demersum HOM05D005933 ORTHO05D007366 3.8e-82 309.7 258 61.6
AagrBONN_evm.TU.Sc2ySwM_117.299 Anthoceros agrestis HOM05D005933 ORTHO05D007366 4.4e-78 296.2 489 38.7
SHI32975 Sapria himalayana HOM05D005933 ORTHO05D000023 6.3e-77 292.4 344 48.3
Mapoly0165s0023 Marchantia polymorpha HOM05D005933 ORTHO05D007366 2.9e-74 283.5 511 34.8
Glyma.19G139200 Glycine max HOM05D005933 ORTHO05D007366 1.2e-64 251.5 244 55.3
BcaNung04276 Brassica carinata HOM05D005933 ORTHO05D007366 5.7e-62 242.7 451 39.5
SMO145G0218 Selaginella moellendorffii HOM05D005933 ORTHO05D007366 2.5e-57 227.3 350 40.3
Pp3c14_19420 Physcomitrium patens HOM05D005933 ORTHO05D007366 4.9e-53 213.0 291 43.0
Rhsim03G0020400 Rhododendron simsii HOM05D005933 ORTHO05D007366 3.2e-52 210.3 241 51.9
Cfa017604 Carpinus fangiana HOM05D005933 ORTHO05D007366 1.4e-44 184.9 382 35.6
CDE02G1215 Ceratophyllum demersum HOM05D002948 ORTHO05D003577 2.7e-43 180.6 173 54.9
C07p62070 Brassica napus HOM05D005933 ORTHO05D007366 3.3e-41 173.7 157 56.1
BolC7t46624H Brassica oleracea HOM05D005933 ORTHO05D007366 3.3e-41 173.7 157 56.1
CBR_g982 Chara braunii HOM05D005933 ORTHO05D007366 5.2e-39 166.4 453 27.8
Cfa017749 Carpinus fangiana HOM05D005933 ORTHO05D007366 1.4e-36 158.3 214 43.9
Atru.chr1.1100 Acer truncatum HOM05D005933 ORTHO05D007366 2.1e-35 154.5 187 48.7
MD12G1074100 Malus domestica HOM05D005933 ORTHO05D007366 1.1e-28 132.1 203 44.3
TAR636G2120 Trochodendron aralioides HOM05D005933 ORTHO05D007366 3.2e-28 130.6 116 59.5
TAR633G2604 Trochodendron aralioides HOM05D005933 ORTHO05D007366 7.1e-28 129.4 108 63.9
Cc06_g12380 Coffea canephora HOM05D005933 ORTHO05D007366 9.2e-28 129.0 175 45.1
Sc13g0001730 Simmondsia chinensis HOM05D005933 ORTHO05D007366 3.5e-27 127.1 163 47.2
BcaNung03522 Brassica carinata HOM05D005933 ORTHO05D007366 4.6e-27 126.7 160 45.6
Nn8g40508 Nelumbo nucifera HOM05D005933 ORTHO05D007366 9.6e-17 92.4 67 67.2
Cre01.g043500 Chlamydomonas reinhardtii HOM05D005933 ORTHO05D007366 3.1e-15 87.4 259 27.4
Rhsim03G0022600 Rhododendron simsii HOM05D005933 ORTHO05D007366 3.5e-11 73.9 52 67.3
Rhsim03G0024000 Rhododendron simsii HOM05D005933 ORTHO05D007366 1.0e-10 72.4 52 65.4
Dinv12483 Davidia involucrata HOM05D005933 ORTHO05D007366 5.6e-09 66.6 108 39.8
SHI32976 Sapria himalayana HOM05D000105 ORTHO05D000023 9.6e-09 65.9 111 36.9
Nn8g40507 Nelumbo nucifera HOM05D005933 ORTHO05D007366 4.8e-08 63.5 80 47.5


User provided reference genes

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