Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G2456 Papaver somniferum HOM05D005856 ORTHO05D007264 1.2e-267 926.0 476 100.0
PSO063G1304 Papaver somniferum HOM05D005856 ORTHO05D007264 1.3e-231 806.2 476 89.7
Aqoxy5G03410 Aquilegia oxysepala HOM05D005856 ORTHO05D007264 2.0e-171 606.3 436 72.0
TAR622G1129 Trochodendron aralioides HOM05D005856 ORTHO05D007264 1.7e-170 603.2 479 67.6
Manes.13G018400 Manihot esculenta HOM05D005856 ORTHO05D007264 1.8e-167 593.2 482 65.1
Duzib248G0543 Durio zibethinus HOM05D005856 ORTHO05D007264 1.5e-166 590.1 442 70.1
Thecc.02G210800 Theobroma cacao HOM05D005856 ORTHO05D007264 4.4e-166 588.6 439 70.2
CANSAT01G0688 Cannabis sativa HOM05D005856 ORTHO05D007264 5.7e-166 588.2 471 67.3
CSS0025471 Camellia sinensis var. sinensis HOM05D005856 ORTHO05D007264 1.3e-165 587.0 441 68.0
Gohir.A04G139000 Gossypium hirsutum HOM05D005856 ORTHO05D007264 1.3e-165 587.0 428 71.7
QL03p053723 Quercus lobata HOM05D005856 ORTHO05D007264 1.3e-165 587.0 421 71.3
Gorai.012G175300 Gossypium raimondii HOM05D005856 ORTHO05D007264 6.3e-165 584.7 444 69.6
COL.COLO4_20381 Corchorus olitorius HOM05D005856 ORTHO05D007264 1.4e-164 583.6 451 68.3
ClCG08G010110 Citrullus lanatus HOM05D005856 ORTHO05D007264 3.5e-163 578.9 450 66.2
Actinidia20701 Actinidia chinensis HOM05D005856 ORTHO05D007264 7.7e-163 577.8 423 70.2
MD13G1117100 Malus domestica HOM05D005856 ORTHO05D007264 1.3e-162 577.0 478 65.1
Prupe.1G228400 Prunus persica HOM05D005856 ORTHO05D007264 1.3e-162 577.0 478 64.9
Atru.chr11.2307 Acer truncatum HOM05D005856 ORTHO05D007264 1.9e-161 573.2 441 66.2
Peaxi162Scf00128g01130 Petunia axillaris HOM05D005856 ORTHO05D007264 1.9e-161 573.2 439 67.0
CsaV3_6G032280 Cucumis sativus L. HOM05D005856 ORTHO05D007264 4.2e-161 572.0 450 66.0
Cfa009330 Carpinus fangiana HOM05D005856 ORTHO05D007264 9.5e-161 570.9 450 67.8
Sed0007662 Sechium edule HOM05D005856 ORTHO05D007264 9.5e-161 570.9 430 68.1
Oeu036879.1 Olea europaea HOM05D005856 ORTHO05D007264 2.1e-160 569.7 438 67.4
SGA_v2.0_scaffold135G34936 Striga asiatica HOM05D005856 ORTHO05D007264 3.6e-160 568.9 449 67.3
Ciclev10031347m.g Citrus clementina HOM05D005856 ORTHO05D007264 6.1e-160 568.2 428 68.5
MELO3C011452.2 Cucumis melo HOM05D005856 ORTHO05D007264 3.0e-159 565.8 452 64.6
ECA233G1277 Erigeron canadensis HOM05D005856 ORTHO05D007264 4.0e-159 565.5 434 66.4
PGSC0003DMG400015053 Solanum tuberosum HOM05D005856 ORTHO05D007264 5.2e-159 565.1 437 67.0
Haze_12395 Corylus avellana HOM05D005856 ORTHO05D007264 8.8e-159 564.3 438 67.6
arahy.Tifrunner.gnm1.ann1.E9QWSH Arachis hypogaea HOM05D005856 ORTHO05D007264 1.5e-158 563.5 418 68.9
Solyc05g015310.3 Solanum lycopersicum HOM05D005856 ORTHO05D007264 3.4e-158 562.4 443 65.7
Nitab4.5_0000379g0010 Nicotiana tabacum HOM05D005856 ORTHO05D007264 5.7e-158 561.6 449 64.6
arahy.Tifrunner.gnm1.ann1.ID6EX5 Arachis hypogaea HOM05D005856 ORTHO05D007264 9.8e-158 560.8 414 68.8
Nitab4.5_0000367g0010 Nicotiana tabacum HOM05D005856 ORTHO05D007264 9.8e-158 560.8 455 63.7
Rhsim12G0099000 Rhododendron simsii HOM05D005856 ORTHO05D007264 9.8e-158 560.8 451 65.2
SalBow1G2377 Salvia bowleyana HOM05D005856 ORTHO05D007264 9.8e-158 560.8 423 68.3
CSS0003803 Camellia sinensis var. sinensis HOM05D005856 ORTHO05D007264 1.7e-157 560.1 493 60.9
Sopen05g010580 Solanum pennellii HOM05D005856 ORTHO05D007264 1.7e-157 560.1 443 65.5
DCAR_031194 Daucus carota HOM05D005856 ORTHO05D007264 2.8e-157 559.3 423 67.4
Lsat_1_v5_gn_8_149340 Lactuca sativa HOM05D005856 ORTHO05D007264 3.7e-157 558.9 432 66.0
Nn4g22353 Nelumbo nucifera HOM05D005856 ORTHO05D007264 4.9e-157 558.5 418 69.1
Glyma.18G007700 Glycine max HOM05D005856 ORTHO05D007264 6.3e-157 558.1 439 67.0
Lj3A1066G66 Lonicera japonica HOM05D005856 ORTHO05D007264 6.3e-157 558.1 387 72.9
Psat5g095080 Pisum sativum HOM05D005856 ORTHO05D007264 6.3e-157 558.1 437 66.4
Medtr3g085550 Medicago truncatula HOM05D005856 ORTHO05D007264 1.1e-156 557.4 415 67.5
CAN.G43.18 Capsicum annuum HOM05D005856 ORTHO05D007264 1.4e-156 557.0 443 64.3
Eucgr.H04651 Eucalyptus grandis HOM05D005856 ORTHO05D007264 2.4e-156 556.2 439 67.7
TPR.G28278 Trifolium pratense HOM05D005856 ORTHO05D007264 3.1e-156 555.8 433 65.4
Lj3g0022861 Lotus japonicus HOM05D005856 ORTHO05D007264 1.2e-155 553.9 438 66.0
Sc04g0010050 Simmondsia chinensis HOM05D005856 ORTHO05D007264 2.7e-155 552.7 435 66.2
Potri.006G025300 Populus trichocarpa HOM05D005856 ORTHO05D007264 5.9e-155 551.6 426 67.8
BcaB03g15198 Brassica carinata HOM05D005856 ORTHO05D007264 1.3e-154 550.4 461 63.3
FAN07G1943 Fragaria x ananassa HOM05D005856 ORTHO05D007264 2.3e-154 549.7 474 63.3
FvH4_4g23940 Fragaria vesca HOM05D005856 ORTHO05D007264 2.9e-154 549.3 451 65.6
BcaC08g46160 Brassica carinata HOM05D005856 ORTHO05D007264 3.8e-154 548.9 437 66.1
FAN17G0012 Fragaria x ananassa HOM05D005856 ORTHO05D007264 5.0e-154 548.5 474 63.3
A07p34000 Brassica napus HOM05D005856 ORTHO05D007264 6.6e-154 548.1 437 65.9
BraA07t31027Z Brassica rapa HOM05D005856 ORTHO05D007264 6.6e-154 548.1 437 65.9
FAN22G0691 Fragaria x ananassa HOM05D005856 ORTHO05D007264 1.5e-153 547.0 476 63.4
Lalb_Chr11g0075741 Lupinus albus HOM05D005856 ORTHO05D007264 1.5e-153 547.0 458 62.4
Glyma.11G249500 Glycine max HOM05D005856 ORTHO05D007264 3.3e-153 545.8 440 65.9
THA.LOC104807593 Tarenaya hassleriana HOM05D005856 ORTHO05D007264 3.3e-153 545.8 430 67.0
PGR119G1218 Punica granatum HOM05D005856 ORTHO05D007264 7.3e-153 544.7 431 66.1
AT1G67440 Arabidopsis thaliana HOM05D005856 ORTHO05D007264 2.8e-152 542.7 440 65.0
RcHm_v2.0_Chr4g0430601 Rosa chinensis HOM05D005856 ORTHO05D007264 2.8e-152 542.7 447 65.3
AL2G26010 Arabidopsis lyrata HOM05D005856 ORTHO05D007264 4.7e-152 542.0 419 67.3
CARHR059980 Cardamine hirsuta HOM05D005856 ORTHO05D007264 4.7e-152 542.0 434 66.1
Hund06082 Selenicereus undatus HOM05D005856 ORTHO05D007264 4.7e-152 542.0 465 62.4
Carub.0002s1377 Capsella rubella HOM05D005856 ORTHO05D007264 3.0e-151 539.3 476 61.6
Potri.016G023500 Populus trichocarpa HOM05D005856 ORTHO05D007264 3.0e-151 539.3 412 67.5
EL10Ac6g13483 Beta vulgaris HOM05D005856 ORTHO05D007264 5.2e-151 538.5 397 68.8
Aa31sc1092G20 Aethionema arabicum HOM05D005856 ORTHO05D007264 6.8e-151 538.1 437 64.5
TWI36G0309 Tripterygium wilfordii HOM05D005856 ORTHO05D007264 2.6e-150 536.2 417 66.9
Sabra06G0018600 Salix brachista HOM05D005856 ORTHO05D007264 3.4e-150 535.8 453 63.6
VMungo1383G1560 Vigna mungo HOM05D005856 ORTHO05D007264 7.5e-150 534.6 418 65.8
Thhalv10019531m.g Eutrema salsugineum HOM05D005856 ORTHO05D007264 2.2e-149 533.1 413 67.3
Sp5g22410 Schrenkiella parvula HOM05D005856 ORTHO05D007264 8.3e-149 531.2 413 67.3
CiPaw.05G111700 Carya illinoinensis HOM05D005856 ORTHO05D007264 1.4e-148 530.4 378 71.4
Phvul.001G260800 Phaseolus vulgaris HOM05D005856 ORTHO05D007264 2.4e-148 529.6 413 65.9
GSVIVG01010446001 Vitis vinifera HOM05D005856 ORTHO05D007264 5.9e-147 525.0 352 74.4
HanXRQChr08g0207721 Helianthus annuus HOM05D005856 ORTHO05D007264 1.7e-146 523.5 420 64.3
Migut.H00051 Erythranthe guttata HOM05D005856 ORTHO05D007264 3.0e-146 522.7 444 62.6
unitig_88.g27631 Utricularia gibba HOM05D005856 ORTHO05D007264 3.0e-146 522.7 471 59.2
CDE05G3252 Ceratophyllum demersum HOM05D005856 ORTHO05D007264 3.9e-146 522.3 443 63.0
AUR62005603 Chenopodium quinoa HOM05D005856 ORTHO05D007264 1.2e-144 517.3 493 56.4
ATR0561G073 Amborella trichopoda HOM05D005856 ORTHO05D007264 1.8e-143 513.5 434 62.0
Cpa.g.sc351.3 Carica papaya HOM05D005856 ORTHO05D007264 2.0e-142 510.0 460 59.3
BolC6t39153H Brassica oleracea HOM05D005856 ORTHO05D007264 1.0e-138 497.7 437 62.0
C06p42840 Brassica napus HOM05D005856 ORTHO05D007264 3.9e-138 495.7 437 62.0
AUR62024126 Chenopodium quinoa HOM05D005856 ORTHO05D007264 7.3e-137 491.5 380 64.5
Os04g0381600 Oryza sativa ssp. japonica HOM05D005856 ORTHO05D007264 2.2e-133 479.9 383 62.1
HPP92_024239 Vanilla planifolia HOM05D005856 ORTHO05D007264 1.2e-131 474.2 424 58.7
Manes.12G012850 Manihot esculenta HOM05D005856 ORTHO05D007264 1.3e-130 470.7 437 58.6
Gohir.D04G181900 Gossypium hirsutum HOM05D005856 ORTHO05D007264 2.9e-125 453.0 429 59.7
Dinv14826 Davidia involucrata HOM05D005856 ORTHO05D007264 4.9e-125 452.2 377 65.3
SEGI_12163 Sequoiadendron giganteum HOM05D005856 ORTHO05D007264 1.1e-124 451.1 358 62.3
Sp5g22430 Schrenkiella parvula HOM05D005856 ORTHO05D007264 4.7e-120 435.6 444 52.7
AL2G26030 Arabidopsis lyrata HOM05D005856 ORTHO05D007264 1.5e-118 430.6 473 51.4
Zm00001eb420890 Zea mays HOM05D005856 ORTHO05D007264 2.1e-115 420.2 340 62.6
Ca_16469_v3 Cicer arietinum L. HOM05D005856 ORTHO05D007264 1.8e-111 407.1 333 64.9
Cc11_g00900 Coffea canephora HOM05D005856 ORTHO05D007264 1.3e-109 401.0 286 67.8
Mapoly0076s0016 Marchantia polymorpha HOM05D005856 ORTHO05D007264 1.3e-109 401.0 489 47.6
Thhalv10019423m.g Eutrema salsugineum HOM05D005856 ORTHO05D007264 6.4e-109 398.7 340 60.3
Pp3c14_19540 Physcomitrium patens HOM05D005856 ORTHO05D007264 4.6e-107 392.5 485 47.4
HPP92_013615 Vanilla planifolia HOM05D005856 ORTHO05D007264 4.6e-107 392.5 356 57.9
AagrBONN_evm.TU.Sc2ySwM_344.2476 Anthoceros agrestis HOM05D005856 ORTHO05D007264 2.1e-104 383.6 391 51.9
SMO236G0063 Selaginella moellendorffii HOM05D005856 ORTHO05D007264 9.0e-103 378.3 375 54.4
CBR_g49528 Chara braunii HOM05D005856 ORTHO05D007264 3.8e-101 372.9 384 51.0
Ah.03g136240 Amaranthus hybridus HOM05D005856 ORTHO05D007264 1.0e-93 348.2 268 66.8
Actinidia26816 Actinidia chinensis HOM05D005856 ORTHO05D007264 1.4e-92 344.4 271 66.1
CARHR068030 Cardamine hirsuta HOM05D005856 ORTHO05D007264 6.0e-91 339.0 400 49.5
FAN12G0203 Fragaria x ananassa HOM05D005856 ORTHO05D007264 8.7e-90 335.1 248 67.7
MCO13G068 Micromonas commoda HOM05D005856 ORTHO05D007264 5.3e-79 299.3 352 48.0
Carub.0002s1379 Capsella rubella HOM05D005856 ORTHO05D007264 6.9e-79 298.9 348 47.4
AUR62005602 Chenopodium quinoa HOM05D005856 ORTHO05D007264 4.8e-72 276.2 313 49.2
AT1G67460 Arabidopsis thaliana HOM05D005856 ORTHO05D007264 3.2e-68 263.5 281 51.2
PRCOL_00004669 Prasinoderma coloniale HOM05D005856 ORTHO05D007264 3.2e-60 236.9 410 37.1
ECA240G4225 Erigeron canadensis HOM05D005856 ORTHO05D007264 4.1e-55 219.9 281 48.0
Cre10.g436600 Chlamydomonas reinhardtii HOM05D005856 ORTHO05D007264 2.7e-51 207.2 438 32.2
MD07G1133300 Malus domestica HOM05D005856 ORTHO05D007264 2.3e-34 151.0 114 70.2
Cfa005743 Carpinus fangiana HOM05D005856 ORTHO05D007264 1.6e-27 128.3 132 54.5
Medtr3g085580 Medicago truncatula HOM05D005856 ORTHO05D007264 6.2e-27 126.3 169 45.0
Haze_12396 Corylus avellana HOM05D005856 ORTHO05D007264 1.4e-26 125.2 122 56.6
SMO199G0052 Selaginella moellendorffii HOM05D005856 ORTHO05D007264 2.9e-24 117.5 227 34.4
Dinv17562 Davidia involucrata HOM05D005856 ORTHO05D015634 6.6e-21 106.3 62 75.8
SMO199G0068 Selaginella moellendorffii HOM05D005856 ORTHO05D007264 3.6e-19 100.5 218 33.9
Cc02_g32220 Coffea canephora HOM05D005856 ORTHO05D007264 2.4e-15 87.8 111 49.5
SMO199G0090 Selaginella moellendorffii HOM05D005856 ORTHO05D007264 5.4e-15 86.7 89 49.4
SMO361G0803 Selaginella moellendorffii HOM05D005856 ORTHO05D007264 6.0e-14 83.2 114 40.4
VMungo0464G1347 Vigna mungo HOM05D005856 ORTHO05D007264 3.9e-13 80.5 123 47.2
SalBow4G2969 Salvia bowleyana HOM05D005856 ORTHO05D015634 4.3e-12 77.0 62 61.3
AL2G26330 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 4.4e-09 67.0 67 49.3
Migut.O00545 Erythranthe guttata HOM05D005856 ORTHO05D007264 6.4e-08 63.2 61 60.7
Rhsim10G0039300 Rhododendron simsii HOM05D005856 ORTHO05D007264 2.4e-07 61.2 55 63.6


User provided reference genes

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