Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G0388 Papaver somniferum HOM05D003724 ORTHO05D004367 1.8e-151 539.3 284 100.0
PSO478G4090 Papaver somniferum HOM05D003724 ORTHO05D004367 5.0e-117 424.9 239 93.7
PSO782G3500 Papaver somniferum HOM05D003724 ORTHO05D004367 7.2e-116 421.0 239 92.5
PSO782G1352 Papaver somniferum HOM05D003724 ORTHO05D004367 1.0e-114 417.2 243 91.4
PSO384G3745 Papaver somniferum HOM05D003724 ORTHO05D004367 1.3e-112 410.2 243 90.5
PSO478G5007 Papaver somniferum HOM05D003724 ORTHO05D004367 1.3e-112 410.2 243 89.3
PSO339G4917 Papaver somniferum HOM05D003724 ORTHO05D004367 2.4e-111 406.0 243 90.1
PSO170G4962 Papaver somniferum HOM05D003724 ORTHO05D004367 1.7e-104 383.3 250 82.0
PSO170G3909 Papaver somniferum HOM05D003724 ORTHO05D004367 8.0e-91 337.8 199 88.9
Aqoxy5G02771 Aquilegia oxysepala HOM05D003724 ORTHO05D004367 1.2e-67 260.8 273 55.3
Aqoxy7G01914 Aquilegia oxysepala HOM05D003724 ORTHO05D004367 3.6e-67 259.2 273 56.4
TAR374G1082 Trochodendron aralioides HOM05D003724 ORTHO05D004367 5.2e-66 255.4 262 57.3
PSO339G0549 Papaver somniferum HOM05D003724 ORTHO05D004367 1.7e-61 240.4 241 62.2
Actinidia08073 Actinidia chinensis HOM05D003724 ORTHO05D004367 8.7e-61 238.0 254 55.1
TAR622G1117 Trochodendron aralioides HOM05D003724 ORTHO05D004367 1.9e-60 236.9 251 51.4
GSVIVG01010479001 Vitis vinifera HOM05D003724 ORTHO05D004367 9.6e-60 234.6 261 51.7
Nitab4.5_0003981g0060 Nicotiana tabacum HOM05D003724 ORTHO05D004367 1.4e-58 230.7 242 55.0
Atru.chr11.2319 Acer truncatum HOM05D003724 ORTHO05D004367 2.4e-58 229.9 251 53.0
Hund06087 Selenicereus undatus HOM05D003724 ORTHO05D004367 3.1e-58 229.6 271 50.2
COL.COLO4_20398 Corchorus olitorius HOM05D003724 ORTHO05D004367 5.3e-58 228.8 249 52.6
Thecc.02G209200 Theobroma cacao HOM05D003724 ORTHO05D004367 1.2e-57 227.6 258 51.2
Solyc04g007330.3 Solanum lycopersicum HOM05D003724 ORTHO05D004367 1.5e-57 227.3 227 55.5
Nitab4.5_0003884g0070 Nicotiana tabacum HOM05D003724 ORTHO05D004367 2.6e-57 226.5 229 55.9
Dinv10959 Davidia involucrata HOM05D003724 ORTHO05D004367 1.3e-56 224.2 257 51.4
CANSAT01G0850 Cannabis sativa HOM05D003724 ORTHO05D004367 6.4e-56 221.9 271 50.9
RcHm_v2.0_Chr4g0430341 Rosa chinensis HOM05D003724 ORTHO05D004367 1.4e-55 220.7 262 48.1
Sc04g0010100 Simmondsia chinensis HOM05D003724 ORTHO05D004367 1.4e-55 220.7 248 50.4
AL2G25920 Arabidopsis lyrata HOM05D003724 ORTHO05D004367 3.2e-55 219.5 251 48.6
AT1G67370 Arabidopsis thaliana HOM05D003724 ORTHO05D004367 4.2e-55 219.2 270 45.9
SalBow2G1610 Salvia bowleyana HOM05D003724 ORTHO05D004367 4.2e-55 219.2 277 47.7
Migut.K00732 Erythranthe guttata HOM05D003724 ORTHO05D004367 7.1e-55 218.4 257 49.4
THA.LOC104825509 Tarenaya hassleriana HOM05D003724 ORTHO05D004367 7.1e-55 218.4 256 48.4
RcHm_v2.0_Chr4g0430321 Rosa chinensis HOM05D003724 ORTHO05D004367 9.3e-55 218.0 228 52.2
Carub.0002s1366 Capsella rubella HOM05D003724 ORTHO05D004367 1.2e-54 217.6 247 49.0
Sed0021729 Sechium edule HOM05D003724 ORTHO05D004367 1.2e-54 217.6 260 51.9
AUR62021613 Chenopodium quinoa HOM05D003724 ORTHO05D004367 1.6e-54 217.2 251 50.6
Nitab4.5_0002441g0080 Nicotiana tabacum HOM05D003724 ORTHO05D004367 2.7e-54 216.5 270 48.9
Sabra01G0039800 Salix brachista HOM05D003724 ORTHO05D004367 6.0e-54 215.3 259 50.6
Thhalv10018311m.g Eutrema salsugineum HOM05D003724 ORTHO05D004367 1.0e-53 214.5 248 51.2
Sp5g22320 Schrenkiella parvula HOM05D003724 ORTHO05D004367 1.0e-53 214.5 247 50.6
CiPaw.05G110100 Carya illinoinensis HOM05D003724 ORTHO05D004367 1.3e-53 214.2 249 49.8
AUR62008480 Chenopodium quinoa HOM05D003724 ORTHO05D004367 1.3e-53 214.2 244 51.6
Gohir.A03G126400 Gossypium hirsutum HOM05D003724 ORTHO05D004367 1.3e-53 214.2 256 50.4
Lj3C1068T3 Lonicera japonica HOM05D003724 ORTHO05D004367 1.3e-53 214.2 246 50.8
PGR102G1478 Punica granatum HOM05D003724 ORTHO05D004367 1.3e-53 214.2 258 48.8
Sopen04g002390 Solanum pennellii HOM05D003724 ORTHO05D004367 1.7e-53 213.8 220 53.6
Sed0012468 Sechium edule HOM05D003724 ORTHO05D004367 2.3e-53 213.4 259 49.8
Nitab4.5_0002699g0070 Nicotiana tabacum HOM05D003724 ORTHO05D004367 3.0e-53 213.0 234 53.4
Peaxi162Scf00128g01233 Petunia axillaris HOM05D003724 ORTHO05D004367 3.0e-53 213.0 243 53.9
Potri.003G173200 Populus trichocarpa HOM05D003724 ORTHO05D004367 3.0e-53 213.0 254 51.6
Sabra03G0126700 Salix brachista HOM05D003724 ORTHO05D004367 3.0e-53 213.0 276 49.3
ATR0561G244 Amborella trichopoda HOM05D003724 ORTHO05D004367 3.9e-53 212.6 257 48.2
Cc09_g04930 Coffea canephora HOM05D003724 ORTHO05D004367 3.9e-53 212.6 255 47.8
FAN17G0970 Fragaria x ananassa HOM05D003724 ORTHO05D004367 3.9e-53 212.6 225 52.0
EL10Ac6g13492 Beta vulgaris HOM05D003724 ORTHO05D004367 5.1e-53 212.2 264 48.5
FvH4_4g23800 Fragaria vesca HOM05D003724 ORTHO05D004367 6.6e-53 211.8 225 51.1
Gorai.005G167400 Gossypium raimondii HOM05D003724 ORTHO05D004367 6.6e-53 211.8 256 49.6
ClCG08G017130 Citrullus lanatus HOM05D003724 ORTHO05D004367 1.5e-52 210.7 264 50.8
FAN22G0779 Fragaria x ananassa HOM05D003724 ORTHO05D004367 1.5e-52 210.7 251 49.4
SGA_v2.0_scaffold9G04687 Striga asiatica HOM05D003724 ORTHO05D004367 3.3e-52 209.5 265 48.7
CARHR059910 Cardamine hirsuta HOM05D003724 ORTHO05D004367 4.3e-52 209.1 263 44.5
Migut.C00176 Erythranthe guttata HOM05D003724 ORTHO05D004367 4.3e-52 209.1 276 44.9
Potri.001G055201 Populus trichocarpa HOM05D003724 ORTHO05D004367 4.3e-52 209.1 271 48.0
Lj1g0003468 Lotus japonicus HOM05D003724 ORTHO05D004367 7.4e-52 208.4 242 51.2
Haze_12416 Corylus avellana HOM05D003724 ORTHO05D004367 9.6e-52 208.0 259 49.4
CsaV3_2G025450 Cucumis sativus L. HOM05D003724 ORTHO05D004367 9.6e-52 208.0 259 50.2
Gohir.D02G149500 Gossypium hirsutum HOM05D003724 ORTHO05D004367 9.6e-52 208.0 261 48.7
A07p33960 Brassica napus HOM05D003724 ORTHO05D004367 1.3e-51 207.6 253 47.4
FAN24G3534 Fragaria x ananassa HOM05D003724 ORTHO05D004367 1.3e-51 207.6 259 46.7
HanXRQChr08g0207781 Helianthus annuus HOM05D003724 ORTHO05D004367 1.3e-51 207.6 261 47.5
BraA07t31023Z Brassica rapa HOM05D003724 ORTHO05D004367 2.8e-51 206.5 253 47.0
Nn3g16465 Nelumbo nucifera HOM05D003724 ORTHO05D004367 2.8e-51 206.5 239 50.2
RcHm_v2.0_Chr4g0430291 Rosa chinensis HOM05D003724 ORTHO05D004367 2.8e-51 206.5 259 48.3
Cpa.g.sc43.54 Carica papaya HOM05D003724 ORTHO05D004367 1.4e-50 204.1 253 48.6
BcaC08g46167 Brassica carinata HOM05D003724 ORTHO05D004367 1.8e-50 203.8 252 46.0
PGSC0003DMG400029108 Solanum tuberosum HOM05D003724 ORTHO05D004367 1.8e-50 203.8 265 46.4
TWI75G0323 Tripterygium wilfordii HOM05D003724 ORTHO05D004367 1.8e-50 203.8 249 48.6
ECA233G0767 Erigeron canadensis HOM05D003724 ORTHO05D004367 3.1e-50 203.0 255 46.7
MD13G1118700 Malus domestica HOM05D003724 ORTHO05D004367 3.1e-50 203.0 257 48.2
BolC6t39148H Brassica oleracea HOM05D003724 ORTHO05D004367 5.3e-50 202.2 253 46.2
Oeu036873.1 Olea europaea HOM05D003724 ORTHO05D004367 5.3e-50 202.2 280 45.7
C06p42900 Brassica napus HOM05D003724 ORTHO05D004367 6.9e-50 201.8 253 46.2
MELO3C010743.2 Cucumis melo HOM05D003724 ORTHO05D004367 6.9e-50 201.8 260 49.2
Ca_16461_v3 Cicer arietinum L. HOM05D003724 ORTHO05D004367 1.2e-49 201.1 232 50.0
Prupe.1G226200 Prunus persica HOM05D003724 ORTHO05D004367 1.2e-49 201.1 247 49.0
HPP92_003196 Vanilla planifolia HOM05D003724 ORTHO05D004367 1.5e-49 200.7 235 48.9
Ah.01g020690 Amaranthus hybridus HOM05D003724 ORTHO05D004367 3.4e-49 199.5 256 45.3
unitig_8.g3138 Utricularia gibba HOM05D003724 ORTHO05D004367 4.5e-49 199.1 225 49.8
Rhsim12G0026000 Rhododendron simsii HOM05D003724 ORTHO05D004367 5.8e-49 198.7 264 46.6
QL03p052803 Quercus lobata HOM05D003724 ORTHO05D004367 7.6e-49 198.4 261 46.0
Aa31sc377G30 Aethionema arabicum HOM05D003724 ORTHO05D004367 2.2e-48 196.8 273 45.1
Oeu060814.1 Olea europaea HOM05D003724 ORTHO05D004367 3.8e-48 196.1 271 46.5
arahy.Tifrunner.gnm1.ann1.3XH1N1 Arachis hypogaea HOM05D003724 ORTHO05D004367 8.4e-48 194.9 241 49.4
arahy.Tifrunner.gnm1.ann1.QLFJ9Y Arachis hypogaea HOM05D003724 ORTHO05D004367 8.4e-48 194.9 241 49.4
Glyma.11G250400 Glycine max HOM05D003724 ORTHO05D004367 8.4e-48 194.9 255 46.7
MD16G1118900 Malus domestica HOM05D003724 ORTHO05D004367 1.9e-47 193.7 241 47.7
Medtr3g085380 Medicago truncatula HOM05D003724 ORTHO05D004367 4.6e-46 189.1 230 47.4
Glyma.18G006800 Glycine max HOM05D003724 ORTHO05D004367 6.0e-46 188.7 209 52.6
Psat5g096280 Pisum sativum HOM05D003724 ORTHO05D004367 1.8e-45 187.2 241 47.3
TPR.G28283 Trifolium pratense HOM05D003724 ORTHO05D004367 2.5e-44 183.3 266 44.7
Lsat_1_v5_gn_8_147680 Lactuca sativa HOM05D003724 ORTHO05D004367 4.3e-44 182.6 250 45.6
Actinidia30650 Actinidia chinensis HOM05D003724 ORTHO05D004367 7.4e-44 181.8 249 47.8
Lalb_Chr03g0034531 Lupinus albus HOM05D003724 ORTHO05D004367 2.8e-43 179.9 283 42.4
CDE05G2922 Ceratophyllum demersum HOM05D003724 ORTHO05D004367 6.2e-43 178.7 226 46.0
Zm00001eb102420 Zea mays HOM05D003724 ORTHO05D004367 6.2e-43 178.7 238 45.0
MBI06_g20299_MAGBIO Magnolia biondii HOM05D003724 ORTHO05D004367 8.1e-43 178.3 253 45.1
Lalb_Chr01g0009271 Lupinus albus HOM05D003724 ORTHO05D004367 6.9e-42 175.3 247 44.1
VMungo1383G3407 Vigna mungo HOM05D003724 ORTHO05D004367 1.3e-40 171.0 305 39.7
Os09g0506800 Oryza sativa ssp. japonica HOM05D003724 ORTHO05D004367 2.2e-40 170.2 238 42.9
CSS0007637 Camellia sinensis var. sinensis HOM05D003724 ORTHO05D004367 2.9e-40 169.9 255 44.3
CAN.G804.3 Capsicum annuum HOM05D003724 ORTHO05D004367 1.1e-39 167.9 178 54.5
C06p38720 Brassica napus HOM05D003724 ORTHO05D004367 9.3e-39 164.9 260 40.4
PSO832G0175 Papaver somniferum HOM05D003724 ORTHO05D004367 7.9e-38 161.8 159 61.0
BcaB03g15203 Brassica carinata HOM05D003724 ORTHO05D004367 1.5e-33 147.5 206 44.2
FvH4_2g22740 Fragaria vesca HOM05D003724 ORTHO05D004367 8.5e-32 141.7 211 41.2
FvH4_4g23791 Fragaria vesca HOM05D003724 ORTHO05D004367 1.2e-30 137.9 211 44.5
SHI17969 Sapria himalayana HOM05D003724 ORTHO05D004367 1.6e-30 137.5 199 47.2
Ciclev10033677m.g Citrus clementina HOM05D003724 ORTHO05D004367 6.7e-29 132.1 165 47.9
Lj1g0008936 Lotus japonicus HOM05D003724 ORTHO05D004367 6.7e-29 132.1 205 41.5
MBI06_g46773_MAGBIO Magnolia biondii HOM05D003724 ORTHO05D004367 3.7e-27 126.3 160 44.4
FAN12G4010 Fragaria x ananassa HOM05D003724 ORTHO05D004367 9.0e-26 121.7 182 44.5
Phvul.001G261701 Phaseolus vulgaris HOM05D003724 ORTHO05D004367 1.1e-23 114.8 189 40.2
AagrBONN_evm.TU.Sc2ySwM_368.2626 Anthoceros agrestis HOM05D003724 ORTHO05D004367 4.3e-20 102.8 192 34.9
vmacro01062 Vaccinium macrocarpon HOM05D003724 ORTHO05D004367 9.1e-18 95.1 111 52.3
FAN07G2055 Fragaria x ananassa HOM05D003724 ORTHO05D004367 7.2e-15 85.5 150 39.3
Solyc05g015370.3 Solanum lycopersicum HOM05D003724 ORTHO05D004367 5.2e-13 79.3 73 56.2
Solyc05g015380.2 Solanum lycopersicum HOM05D003724 ORTHO05D004367 7.4e-12 75.5 111 45.0
PSO339G0625 Papaver somniferum HOM05D003724 ORTHO05D004367 4.8e-11 72.8 44 81.8
BcaB03g15202 Brassica carinata HOM05D003724 ORTHO05D004367 2.2e-08 63.9 45 64.4
Hma1.2p1_0053F.1_g030850 Hydrangea macrophylla HOM05D003724 ORTHO05D004367 2.2e-08 63.9 111 38.7
CAN.G804.4 Capsicum annuum HOM05D003724 ORTHO05D004367 3.8e-08 63.2 47 66.0
Pp3c5_4780 Physcomitrium patens HOM05D003724 ORTHO05D004367 3.8e-08 63.2 279 23.3
Manes.12G011600 Manihot esculenta HOM05D003724 ORTHO05D004367 5.0e-08 62.8 45 68.9
Mapoly0003s0194 Marchantia polymorpha HOM05D003724 ORTHO05D004367 6.5e-08 62.4 251 22.7
CSS0039632 Camellia sinensis var. sinensis HOM05D003724 ORTHO05D004367 2.5e-07 60.5 45 66.7
Hma1.2p1_0200F.1_g085970 Hydrangea macrophylla HOM05D003724 ORTHO05D004367 4.2e-07 59.7 47 59.6
AL1G56910 Arabidopsis lyrata HOM05D003724 ORTHO05D004367 7.2e-07 58.9 74 44.6
DCAR_028604 Daucus carota HOM05D000366 ORTHO05D000437 1.6e-06 57.8 74 41.9
CBR_g17956 Chara braunii HOM05D003724 ORTHO05D004367 4.7e-06 56.2 223 26.5


User provided reference genes

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