Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO732G0498 Papaver somniferum HOM05D003719 ORTHO05D004116 3.9e-177 624.8 336 100.0
PSO732G0548 Papaver somniferum HOM05D003719 ORTHO05D004116 5.0e-124 448.4 239 98.7
PSO732G0471 Papaver somniferum HOM05D003719 ORTHO05D004116 1.9e-123 446.4 237 99.6
PSO017G2223 Papaver somniferum HOM05D003719 ORTHO05D004116 3.6e-82 309.3 233 71.2
PSO349G0045 Papaver somniferum HOM05D003719 ORTHO05D004116 2.2e-71 273.5 392 46.2
PSO017G6528 Papaver somniferum HOM05D003719 ORTHO05D004116 6.9e-33 145.6 328 37.8
PSO675G5773 Papaver somniferum HOM05D003719 ORTHO05D004116 9.0e-33 145.2 193 44.6
PSO170G0628 Papaver somniferum HOM05D003719 ORTHO05D004116 8.5e-31 138.7 339 36.3
TWI32G1338 Tripterygium wilfordii HOM05D003719 ORTHO05D004116 7.4e-27 125.6 295 35.3
TWI60G0027 Tripterygium wilfordii HOM05D003719 ORTHO05D004116 2.8e-26 123.6 292 34.9
Manes.09G133700 Manihot esculenta HOM05D003719 ORTHO05D004116 6.9e-25 119.0 339 30.4
Manes.08G156200 Manihot esculenta HOM05D003719 ORTHO05D004116 1.2e-24 118.2 324 31.8
RcHm_v2.0_Chr1g0340791 Rosa chinensis HOM05D003719 ORTHO05D004116 2.6e-24 117.1 330 32.1
Thecc.05G235300 Theobroma cacao HOM05D003719 ORTHO05D004116 2.6e-24 117.1 327 32.4
Nn1g09363 Nelumbo nucifera HOM05D003719 ORTHO05D004116 5.9e-24 115.9 333 34.5
TAR629G0070 Trochodendron aralioides HOM05D003719 ORTHO05D004116 5.9e-24 115.9 309 34.0
MBI04_g06283_MAGBIO Magnolia biondii HOM05D003719 ORTHO05D004116 1.3e-23 114.8 320 33.8
Sabra13G0061200 Salix brachista HOM05D003719 ORTHO05D004116 3.8e-23 113.2 314 32.5
Dinv43515 Davidia involucrata HOM05D003719 ORTHO05D004116 5.0e-23 112.8 319 34.2
ClCG05G002450 Citrullus lanatus HOM05D003719 ORTHO05D004116 6.5e-23 112.5 299 32.4
Sabra19G0054700 Salix brachista HOM05D003719 ORTHO05D004116 1.1e-22 111.7 321 32.1
HPP92_020485 Vanilla planifolia HOM05D003719 ORTHO05D004116 1.1e-22 111.7 280 32.5
Hma1.2p1_0128F.1_g060060 Hydrangea macrophylla HOM05D003719 ORTHO05D004116 1.4e-22 111.3 317 34.7
Duzib128G0107 Durio zibethinus HOM05D003719 ORTHO05D004116 1.9e-22 110.9 330 32.7
FvH4_7g08280 Fragaria vesca HOM05D003719 ORTHO05D004116 1.9e-22 110.9 329 30.1
THA.LOC104820814 Tarenaya hassleriana HOM05D003719 ORTHO05D004116 2.5e-22 110.5 340 29.1
QL04p053441 Quercus lobata HOM05D003719 ORTHO05D004116 4.2e-22 109.8 282 34.0
AL6G28780 Arabidopsis lyrata HOM05D003719 ORTHO05D004116 7.2e-22 109.0 325 32.6
Sed0017190 Sechium edule HOM05D003719 ORTHO05D004116 7.2e-22 109.0 290 29.3
Duzib177G0203 Durio zibethinus HOM05D003719 ORTHO05D004116 9.4e-22 108.6 327 31.8
Potri.013G070400 Populus trichocarpa HOM05D003719 ORTHO05D004116 9.4e-22 108.6 340 31.5
CANSAT25G2268 Cannabis sativa HOM05D003719 ORTHO05D004116 1.2e-21 108.2 324 32.4
Atru.chr2.1627 Acer truncatum HOM05D003719 ORTHO05D004116 2.7e-21 107.1 314 33.8
CDE11G0837 Ceratophyllum demersum HOM05D003719 ORTHO05D004116 3.6e-21 106.7 320 29.4
GSVIVG01019328001 Vitis vinifera HOM05D003719 ORTHO05D004116 3.6e-21 106.7 317 32.5
Aa31LG11G11940 Aethionema arabicum HOM05D003719 ORTHO05D004116 4.7e-21 106.3 295 33.2
MD07G1081800 Malus domestica HOM05D003719 ORTHO05D004116 7.9e-21 105.5 324 33.3
THA.LOC104827246 Tarenaya hassleriana HOM05D003719 ORTHO05D004116 1.0e-20 105.1 322 31.4
Actinidia31730 Actinidia chinensis HOM05D003719 ORTHO05D004116 1.8e-20 104.4 316 33.5
Eucgr.E01743 Eucalyptus grandis HOM05D003719 ORTHO05D004116 1.8e-20 104.4 322 31.4
THA.LOC104802889 Tarenaya hassleriana HOM05D003719 ORTHO05D004116 1.8e-20 104.4 319 31.0
MD02G1231000 Malus domestica HOM05D003719 ORTHO05D004116 2.3e-20 104.0 326 32.8
PSO732G0588 Papaver somniferum HOM05D003719 ORTHO05D004116 2.3e-20 104.0 194 37.6
AT5G17690 Arabidopsis thaliana HOM05D003719 ORTHO05D004116 3.9e-20 103.2 325 31.4
Sed0010466 Sechium edule HOM05D003719 ORTHO05D004116 3.9e-20 103.2 330 31.5
Lj9A617T60 Lonicera japonica HOM05D003719 ORTHO05D004116 5.1e-20 102.8 264 32.6
arahy.Tifrunner.gnm1.ann1.N569AS Arachis hypogaea HOM05D003719 ORTHO05D004116 1.1e-19 101.7 307 31.6
PGR042G1172 Punica granatum HOM05D003719 ORTHO05D004116 1.1e-19 101.7 298 33.2
Ah.05g177100 Amaranthus hybridus HOM05D003719 ORTHO05D004116 1.5e-19 101.3 282 32.3
Ciclev10031549m.g Citrus clementina HOM05D003719 ORTHO05D004116 1.5e-19 101.3 316 31.3
Gorai.007G347200 Gossypium raimondii HOM05D003719 ORTHO05D004116 1.5e-19 101.3 325 29.8
Os10g0324900 Oryza sativa ssp. japonica HOM05D003719 ORTHO05D004116 1.5e-19 101.3 291 29.9
Potri.019G044400 Populus trichocarpa HOM05D003719 ORTHO05D004116 1.5e-19 101.3 318 30.8
CsaV3_6G006350 Cucumis sativus L. HOM05D003719 ORTHO05D004116 2.0e-19 100.9 324 30.2
Gohir.D11G317400 Gossypium hirsutum HOM05D003719 ORTHO05D004116 2.0e-19 100.9 325 29.8
Actinidia05832 Actinidia chinensis HOM05D003719 ORTHO05D004116 2.6e-19 100.5 320 31.6
Cpa.g.sc73.30 Carica papaya HOM05D003719 ORTHO05D004116 3.3e-19 100.1 232 34.5
Glyma.04G002100 Glycine max HOM05D003719 ORTHO05D004116 3.3e-19 100.1 238 36.6
BcaC03g13534 Brassica carinata HOM05D003719 ORTHO05D004116 4.4e-19 99.8 300 31.0
Haze_15777 Corylus avellana HOM05D003719 ORTHO05D004116 4.4e-19 99.8 321 30.5
CsaV3_3G009890 Cucumis sativus L. HOM05D002544 ORTHO05D007277 4.4e-19 99.8 297 31.3
Aqoxy7G02508 Aquilegia oxysepala HOM05D003719 ORTHO05D004116 5.7e-19 99.4 325 30.5
Dinv43958 Davidia involucrata HOM05D003719 ORTHO05D004116 5.7e-19 99.4 324 30.6
Sc02g0003460 Simmondsia chinensis HOM05D003719 ORTHO05D004116 5.7e-19 99.4 306 31.0
arahy.Tifrunner.gnm1.ann1.U92JU2 Arachis hypogaea HOM05D003719 ORTHO05D004116 7.4e-19 99.0 311 30.2
Gohir.A11G301800 Gossypium hirsutum HOM05D003719 ORTHO05D004116 9.7e-19 98.6 326 29.4
VMungo1309G0350 Vigna mungo HOM05D003719 ORTHO05D004116 9.7e-19 98.6 278 35.6
BolC2t06833H Brassica oleracea HOM05D003719 ORTHO05D004116 1.3e-18 98.2 296 30.7
Hund17170 Selenicereus undatus HOM05D003719 ORTHO05D000105 1.3e-18 98.2 301 32.2
Solyc01g081500.4 Solanum lycopersicum HOM05D003719 ORTHO05D004116 1.3e-18 98.2 287 32.4
C02p09250 Brassica napus HOM05D003719 ORTHO05D004116 1.7e-18 97.8 297 30.6
Nitab4.5_0000792g0110 Nicotiana tabacum HOM05D003719 ORTHO05D004116 1.7e-18 97.8 237 35.0
HanXRQChr11g0343451 Helianthus annuus HOM05D003719 ORTHO05D004116 2.2e-18 97.4 269 32.3
Phvul.009G117500 Phaseolus vulgaris HOM05D003719 ORTHO05D004116 2.2e-18 97.4 281 34.5
Sopen01g033060 Solanum pennellii HOM05D003719 ORTHO05D004116 2.2e-18 97.4 287 32.4
Carub.0006s1593 Capsella rubella HOM05D003719 ORTHO05D004116 2.8e-18 97.1 325 31.1
MELO3C022484.2 Cucumis melo HOM05D003719 ORTHO05D004116 2.8e-18 97.1 326 30.1
A02p04380 Brassica napus HOM05D003719 ORTHO05D004116 3.7e-18 96.7 283 30.7
BraA02t05402Z Brassica rapa HOM05D003719 ORTHO05D004116 3.7e-18 96.7 283 30.7
unitig_0.g1580 Utricularia gibba HOM05D003719 ORTHO05D004116 3.7e-18 96.7 254 36.6
Glyma.06G001700 Glycine max HOM05D003719 ORTHO05D004116 4.8e-18 96.3 244 34.0
CiPaw.02G047600 Carya illinoinensis HOM05D003719 ORTHO05D004116 8.2e-18 95.5 316 32.3
PGSC0003DMG400031112 Solanum tuberosum HOM05D003719 ORTHO05D004116 8.2e-18 95.5 297 32.0
Nitab4.5_0025236g0010 Nicotiana tabacum HOM05D003719 ORTHO05D004116 1.1e-17 95.1 236 34.7
Sp6g26530 Schrenkiella parvula HOM05D003719 ORTHO05D004116 1.1e-17 95.1 327 29.4
ClCG06G000580 Citrullus lanatus HOM05D003719 ORTHO05D004116 1.4e-17 94.7 322 28.9
HanXRQChr04g0117621 Helianthus annuus HOM05D003719 ORTHO05D004116 1.4e-17 94.7 337 30.3
CARHR195490 Cardamine hirsuta HOM05D003719 ORTHO05D004116 1.8e-17 94.4 326 30.1
TPR.G38555 Trifolium pratense HOM05D001257 ORTHO05D005285 1.8e-17 94.4 269 32.7
MSTRG.4990 Avicennia marina HOM05D003719 ORTHO05D004116 3.1e-17 93.6 314 31.5
Sed0012975 Sechium edule HOM05D003719 ORTHO05D004116 3.1e-17 93.6 329 27.4
Nn7g37398 Nelumbo nucifera HOM05D003719 ORTHO05D004116 4.1e-17 93.2 65 63.1
FAN06G0622 Fragaria x ananassa HOM05D003719 ORTHO05D004116 7.0e-17 92.4 345 28.7
PGSC0003DMG400031514 Solanum tuberosum HOM05D003719 ORTHO05D004116 7.0e-17 92.4 86 54.7
FAN10G3972 Fragaria x ananassa HOM05D003719 ORTHO05D004116 9.1e-17 92.0 341 29.3
Lj3g0017682 Lotus japonicus HOM05D003719 ORTHO05D004116 9.1e-17 92.0 336 29.5
Peaxi162Scf00907g00023 Petunia axillaris HOM05D003719 ORTHO05D004116 9.1e-17 92.0 323 30.3
Migut.N01648 Erythranthe guttata HOM05D003719 ORTHO05D004116 1.5e-16 91.3 318 29.9
ATR0568G049 Amborella trichopoda HOM05D003719 ORTHO05D004116 2.6e-16 90.5 331 28.1
Nitab4.5_0000050g0180 Nicotiana tabacum HOM05D003719 ORTHO05D004116 2.6e-16 90.5 236 33.9
Solyc10g024470.3 Solanum lycopersicum HOM05D003719 ORTHO05D004116 3.5e-16 90.1 69 58.0
Sopen10g009690 Solanum pennellii HOM05D003719 ORTHO05D004116 3.5e-16 90.1 69 58.0
SHI54853 Sapria himalayana HOM05D003719 ORTHO05D004116 7.7e-16 89.0 310 29.0
Cc02_g26500 Coffea canephora HOM05D003719 ORTHO05D004116 1.3e-15 88.2 320 28.1
PSO017G2979 Papaver somniferum HOM05D033783 ORTHO05D004116 1.7e-15 87.8 66 63.6
BcaB01g04909 Brassica carinata HOM05D003719 ORTHO05D004116 2.2e-15 87.4 242 31.0
Oeu034882.1 Olea europaea HOM05D003719 ORTHO05D004116 2.2e-15 87.4 251 32.3
VMungo0331G0617 Vigna mungo HOM05D003719 ORTHO05D004116 2.9e-15 87.0 324 29.0
EL10Ac1g00661 Beta vulgaris HOM05D003719 ORTHO05D004116 3.8e-15 86.7 308 28.9
PSO170G3936 Papaver somniferum HOM05D033783 ORTHO05D004116 3.8e-15 86.7 66 62.1
Lsat_1_v5_gn_1_89600 Lactuca sativa HOM05D003719 ORTHO05D004116 6.5e-15 85.9 290 31.0
Phvul.010G034600 Phaseolus vulgaris HOM05D003719 ORTHO05D004116 6.5e-15 85.9 324 28.7
DCAR_029570 Daucus carota HOM05D003719 ORTHO05D004116 8.5e-15 85.5 208 33.7
ECA236G3956 Erigeron canadensis HOM05D001257 ORTHO05D005285 8.5e-15 85.5 342 28.7
Thhalv10013571m.g Eutrema salsugineum HOM05D003719 ORTHO05D004116 1.1e-14 85.1 323 29.4
Glyma.16G079900 Glycine max HOM05D003719 ORTHO05D004116 1.1e-14 85.1 315 27.3
DCAR_025000 Daucus carota HOM05D003719 ORTHO05D004116 1.5e-14 84.7 190 36.8
BraA09t37591Z Brassica rapa HOM05D003719 ORTHO05D004116 1.9e-14 84.3 315 29.8
ECA248G2234 Erigeron canadensis HOM05D003719 ORTHO05D004116 2.5e-14 84.0 82 52.4
Migut.O00699 Erythranthe guttata HOM05D003719 ORTHO05D004116 5.5e-14 82.8 75 57.3
DCAR_015727 Daucus carota HOM05D003719 ORTHO05D004116 7.2e-14 82.4 230 33.0
Glyma.03G111600 Glycine max HOM05D003719 ORTHO05D004116 7.2e-14 82.4 95 40.0
Psat5g001120 Pisum sativum HOM05D003719 ORTHO05D004116 1.2e-13 81.6 245 33.5
BcaC04g18768 Brassica carinata HOM05D003719 ORTHO05D004116 1.6e-13 81.3 73 57.5
A10p21730 Brassica napus HOM05D003719 ORTHO05D004116 1.6e-13 81.3 73 57.5
C09p59480 Brassica napus HOM05D003719 ORTHO05D004116 1.6e-13 81.3 73 57.5
BolC9t58786H Brassica oleracea HOM05D003719 ORTHO05D004116 1.6e-13 81.3 73 57.5
BraA10t44234Z Brassica rapa HOM05D003719 ORTHO05D004116 1.6e-13 81.3 73 57.5
Glyma.03G094200 Glycine max HOM05D003719 ORTHO05D004116 1.6e-13 81.3 317 27.8
PSO339G4177 Papaver somniferum HOM05D008436 ORTHO05D303446 1.6e-13 81.3 85 64.7
BcaB08g36751 Brassica carinata HOM05D003719 ORTHO05D004116 4.7e-13 79.7 225 30.7
BcaB01g05152 Brassica carinata HOM05D003719 ORTHO05D004116 6.1e-13 79.3 251 28.7
BolC3t13474H Brassica oleracea HOM05D003719 ORTHO05D004116 6.1e-13 79.3 251 28.7
Oeu032776.1 Olea europaea HOM05D003719 ORTHO05D004116 6.1e-13 79.3 290 29.0
PSO017G0756 Papaver somniferum HOM05D003719 ORTHO05D004116 8.0e-13 79.0 73 56.2
Oeu024948.1 Olea europaea HOM05D003719 ORTHO05D004116 2.3e-12 77.4 280 31.1
PSO063G2414 Papaver somniferum HOM05D008436 ORTHO05D304377 3.0e-12 77.0 86 57.0
PSO541G0112 Papaver somniferum HOM05D008436 ORTHO05D304515 3.0e-12 77.0 103 45.6
SEGI_28532 Sequoiadendron giganteum HOM05D003719 ORTHO05D004116 3.9e-12 76.6 56 58.9
Lalb_Chr13g0290921 Lupinus albus HOM05D003719 ORTHO05D004116 5.2e-12 76.3 73 56.2
Peaxi162Scf00245g00417 Petunia axillaris HOM05D003719 ORTHO05D004116 5.2e-12 76.3 350 27.4
TPR.G9787 Trifolium pratense HOM05D003719 ORTHO05D004116 5.2e-12 76.3 75 53.3
Oeu020240.1 Olea europaea HOM05D003719 ORTHO05D004116 1.5e-11 74.7 84 50.0
Oeu045633.2 Olea europaea HOM05D003719 ORTHO05D004116 1.5e-11 74.7 82 48.8
Pp3c9_6410 Physcomitrium patens HOM05D003719 ORTHO05D004116 1.5e-11 74.7 65 50.8
A03p08460 Brassica napus HOM05D003719 ORTHO05D004116 2.0e-11 74.3 235 31.5
BraA03t10169Z Brassica rapa HOM05D003719 ORTHO05D004116 2.0e-11 74.3 235 31.5
HanXRQChr04g0117671 Helianthus annuus HOM05D003719 ORTHO05D004116 3.3e-11 73.6 77 50.6
SGA_v2.0_scaffold95G28748 Striga asiatica HOM05D003719 ORTHO05D004116 4.4e-11 73.2 316 29.4
Hund26916 Selenicereus undatus HOM05D003719 ORTHO05D004116 7.4e-11 72.4 299 29.8
Ca_23168_v3 Cicer arietinum L. HOM05D003719 ORTHO05D004116 9.7e-11 72.0 70 52.9
Lalb_Chr23g0264911 Lupinus albus HOM05D003719 ORTHO05D004116 1.3e-10 71.6 274 28.5
PSO675G2938 Papaver somniferum HOM05D008436 ORTHO05D304848 2.2e-10 70.9 84 45.2
Lalb_Chr10g0091841 Lupinus albus HOM05D003719 ORTHO05D004116 2.8e-10 70.5 54 53.7
Mapoly0009s0028 Marchantia polymorpha HOM05D003719 ORTHO05D004116 2.8e-10 70.5 66 47.0
Mapoly0024s0010 Marchantia polymorpha HOM05D003719 ORTHO05D004116 2.8e-10 70.5 65 50.8
BraA09t38097Z Brassica rapa HOM05D003719 ORTHO05D004116 4.8e-10 69.7 141 34.8
PSO832G1710 Papaver somniferum HOM05D008436 ORTHO05D303139 8.2e-10 68.9 84 44.0
PSO478G1417 Papaver somniferum HOM05D008436 ORTHO05D302574 1.4e-09 68.2 83 44.6
Mapoly0010s0167 Marchantia polymorpha HOM05D003719 ORTHO05D004116 3.1e-09 67.0 112 37.5
Psat4g207560 Pisum sativum HOM05D003719 ORTHO05D004116 4.1e-09 66.6 68 52.9
Nitab4.5_0003123g0030 Nicotiana tabacum HOM05D003719 ORTHO05D004116 5.3e-09 66.2 253 31.2
Rhsim07G0047900 Rhododendron simsii HOM05D003719 ORTHO05D004116 5.3e-09 66.2 57 54.4
PSO063G3367 Papaver somniferum HOM05D008436 ORTHO05D303381 7.0e-09 65.9 83 43.4
Prupe.2G107000 Prunus persica HOM05D003719 ORTHO05D004116 7.0e-09 65.9 292 30.1
Lsat_1_v5_gn_7_34101 Lactuca sativa HOM05D003719 ORTHO05D004116 1.2e-08 65.1 242 31.8
Lalb_Chr12g0210141 Lupinus albus HOM05D003719 ORTHO05D004116 3.5e-08 63.5 73 39.7
PSO170G0474 Papaver somniferum HOM05D008436 ORTHO05D302981 4.5e-08 63.2 83 42.2
PSO017G4085 Papaver somniferum HOM05D008436 ORTHO05D303543 5.9e-08 62.8 83 42.2
FAN03G1006 Fragaria x ananassa HOM05D003719 ORTHO05D004116 1.0e-07 62.0 326 27.0
SEGI_39270 Sequoiadendron giganteum HOM05D003719 ORTHO05D004116 1.0e-07 62.0 66 51.5
C03p09860 Brassica napus HOM05D003719 ORTHO05D004116 1.3e-07 61.6 237 29.5
Lalb_Chr07g0194591 Lupinus albus HOM05D003719 ORTHO05D004116 1.7e-07 61.2 241 24.9
FAN01G0294 Fragaria x ananassa HOM05D003719 ORTHO05D004116 2.2e-07 60.8 96 42.7
arahy.Tifrunner.gnm1.ann1.RGD672 Arachis hypogaea HOM05D022377 ORTHO05D004116 1.5e-06 58.2 62 38.7
Ca_15283_v3 Cicer arietinum L. HOM05D003719 ORTHO05D004116 2.5e-06 57.4 240 28.3
Ca_15419_v3 Cicer arietinum L. HOM05D003719 ORTHO05D004116 2.5e-06 57.4 240 28.3
PSO509G0035 Papaver somniferum HOM05D008436 ORTHO05D305677 4.2e-06 56.6 83 39.8
PSO782G5066 Papaver somniferum HOM05D008436 ORTHO05D304712 4.2e-06 56.6 96 47.9
Ah.05g177090 Amaranthus hybridus HOM05D000308 ORTHO05D005285 7.2e-06 55.8 253 28.1
COL.COLO4_32214 Corchorus olitorius HOM05D003719 ORTHO05D004116 7.2e-06 55.8 170 33.5
Lalb_Chr13g0290971 Lupinus albus HOM05D003719 ORTHO05D004116 7.2e-06 55.8 158 27.8
arahy.Tifrunner.gnm1.ann1.ACR8J8 Arachis hypogaea HOM05D022377 ORTHO05D004116 9.4e-06 55.5 77 36.4
arahy.Tifrunner.gnm1.ann1.FLAY3S Arachis hypogaea HOM05D003719 ORTHO05D004116 9.4e-06 55.5 70 34.3
PSO210G7172 Papaver somniferum HOM05D008436 ORTHO05D305611 9.4e-06 55.5 56 53.6
PSO801G0483 Papaver somniferum HOM05D008436 ORTHO05D304289 9.4e-06 55.5 85 36.5


User provided reference genes

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