Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO729G0146 Papaver somniferum HOM05D004154 ORTHO05D004988 3.2e-151 538.5 295 100.0
PSO063G0915 Papaver somniferum HOM05D004154 ORTHO05D004988 2.3e-72 276.6 201 78.1
PSO384G3063 Papaver somniferum HOM05D004154 ORTHO05D004988 2.7e-41 173.3 102 90.2
PSO135G0371 Papaver somniferum HOM05D004154 ORTHO05D004988 6.1e-41 172.2 102 89.2
PSO724G1367 Papaver somniferum HOM05D012994 ORTHO05D015730 2.6e-36 156.8 193 59.1
Aqoxy7G00145 Aquilegia oxysepala HOM05D004154 ORTHO05D004988 5.0e-35 152.5 143 60.8
PGR042G2687 Punica granatum HOM05D004154 ORTHO05D004988 1.6e-33 147.5 99 76.8
QL02p031322 Quercus lobata HOM05D004154 ORTHO05D004988 2.7e-33 146.7 99 73.7
Duzib205G2047 Durio zibethinus HOM05D004154 ORTHO05D004988 1.0e-32 144.8 99 75.8
AUR62019814 Chenopodium quinoa HOM05D004154 ORTHO05D004988 2.3e-32 143.7 149 55.0
AUR62010814 Chenopodium quinoa HOM05D004154 ORTHO05D004988 3.0e-32 143.3 149 54.4
Prupe.5G115800 Prunus persica HOM05D004154 ORTHO05D004988 6.7e-32 142.1 111 66.7
TAR374G1070 Trochodendron aralioides HOM05D004154 ORTHO05D004988 6.7e-32 142.1 258 39.5
EL10Ac5g12892 Beta vulgaris HOM05D004154 ORTHO05D004988 1.5e-31 141.0 99 69.7
Manes.02G012100 Manihot esculenta HOM05D004154 ORTHO05D004988 2.6e-31 140.2 99 71.7
Nn3g19070 Nelumbo nucifera HOM05D004154 ORTHO05D004988 2.6e-31 140.2 99 71.7
Aa31LG6G7020 Aethionema arabicum HOM05D004154 ORTHO05D004988 4.4e-31 139.4 102 69.6
AL7G29550 Arabidopsis lyrata HOM05D004154 ORTHO05D004988 5.7e-31 139.0 102 69.6
CiPaw.11G123500 Carya illinoinensis HOM05D004154 ORTHO05D004988 5.7e-31 139.0 130 56.2
Sed0017887 Sechium edule HOM05D004154 ORTHO05D004988 7.4e-31 138.7 97 72.2
Haze_08653 Corylus avellana HOM05D004154 ORTHO05D004988 9.7e-31 138.3 130 55.4
Duzib068G1416 Durio zibethinus HOM05D004154 ORTHO05D004988 9.7e-31 138.3 149 53.7
Cfa012835 Carpinus fangiana HOM05D004154 ORTHO05D004988 1.3e-30 137.9 130 55.4
COL.COLO4_21713 Corchorus olitorius HOM05D004154 ORTHO05D004988 1.3e-30 137.9 151 55.0
MD06G1103000 Malus domestica HOM05D004154 ORTHO05D004988 1.3e-30 137.9 99 70.7
AT4G23800 Arabidopsis thaliana HOM05D004154 ORTHO05D004988 1.7e-30 137.5 102 68.6
A09p28160 Brassica napus HOM05D004154 ORTHO05D004988 2.2e-30 137.1 122 58.2
Thecc.03G293700 Theobroma cacao HOM05D004154 ORTHO05D004988 2.2e-30 137.1 111 64.0
Aa31LG5G23780 Aethionema arabicum HOM05D004154 ORTHO05D004988 2.8e-30 136.7 102 68.6
BraA09t38379Z Brassica rapa HOM05D004154 ORTHO05D004988 2.8e-30 136.7 122 58.2
CSS0019694 Camellia sinensis var. sinensis HOM05D004154 ORTHO05D004988 2.8e-30 136.7 112 64.3
Carub.0007s1732 Capsella rubella HOM05D004154 ORTHO05D004988 2.8e-30 136.7 141 55.3
Nitab4.5_0010205g0030 Nicotiana tabacum HOM05D004154 ORTHO05D004988 2.8e-30 136.7 102 68.6
RcHm_v2.0_Chr7g0195371 Rosa chinensis HOM05D004154 ORTHO05D004988 2.8e-30 136.7 100 69.0
CARHR231190 Cardamine hirsuta HOM05D004154 ORTHO05D004988 3.7e-30 136.3 102 68.6
FvH4_5g04120 Fragaria vesca HOM05D004154 ORTHO05D004988 3.7e-30 136.3 112 63.4
FAN13G2696 Fragaria x ananassa HOM05D004154 ORTHO05D004988 3.7e-30 136.3 112 63.4
FAN18G0035 Fragaria x ananassa HOM05D004154 ORTHO05D004988 3.7e-30 136.3 112 63.4
FAN18G2617 Fragaria x ananassa HOM05D004154 ORTHO05D004988 3.7e-30 136.3 112 63.4
TWI60G1238 Tripterygium wilfordii HOM05D004154 ORTHO05D004988 3.7e-30 136.3 137 56.9
arahy.Tifrunner.gnm1.ann1.1D56YB Arachis hypogaea HOM05D004154 ORTHO05D004988 6.3e-30 135.6 141 53.2
BcaNung01086 Brassica carinata HOM05D004154 ORTHO05D004988 6.3e-30 135.6 102 67.6
ClCG07G014910 Citrullus lanatus HOM05D004154 ORTHO05D004988 6.3e-30 135.6 98 70.4
Nitab4.5_0000223g0250 Nicotiana tabacum HOM05D004154 ORTHO05D004988 6.3e-30 135.6 102 67.6
Sp7g21760 Schrenkiella parvula HOM05D004154 ORTHO05D004988 6.3e-30 135.6 146 53.4
SalBow1G2286 Salvia bowleyana HOM05D004154 ORTHO05D004988 1.1e-29 134.8 201 45.3
SalBow1G6205 Salvia bowleyana HOM05D004154 ORTHO05D004988 1.1e-29 134.8 201 45.3
FAN04G1279 Fragaria x ananassa HOM05D004154 ORTHO05D004988 1.4e-29 134.4 112 61.6
FAN04G2754 Fragaria x ananassa HOM05D004154 ORTHO05D004988 1.4e-29 134.4 112 61.6
Gorai.007G025500 Gossypium raimondii HOM05D004154 ORTHO05D004988 1.8e-29 134.0 100 67.0
Peaxi162Scf00074g01143 Petunia axillaris HOM05D004154 ORTHO05D004988 1.8e-29 134.0 99 68.7
TPR.G3381 Trifolium pratense HOM05D004154 ORTHO05D004988 1.8e-29 134.0 99 69.7
Atru.chr2.763 Acer truncatum HOM05D004154 ORTHO05D004988 2.4e-29 133.7 122 58.2
Atru.chr9.2030 Acer truncatum HOM05D004154 ORTHO05D004988 2.4e-29 133.7 122 58.2
Atru.chr9.2037 Acer truncatum HOM05D004154 ORTHO05D001448 2.4e-29 133.7 122 58.2
Eucgr.E00847 Eucalyptus grandis HOM05D004154 ORTHO05D004988 2.4e-29 133.7 99 69.7
Thhalv10028648m.g Eutrema salsugineum HOM05D004154 ORTHO05D004988 3.1e-29 133.3 122 58.2
BcaC04g21100 Brassica carinata HOM05D004154 ORTHO05D004988 4.1e-29 132.9 122 56.6
C09p35690 Brassica napus HOM05D004154 ORTHO05D004988 4.1e-29 132.9 122 56.6
BolC9t56405H Brassica oleracea HOM05D004154 ORTHO05D004988 4.1e-29 132.9 122 56.6
FAN08G1247 Fragaria x ananassa HOM05D004154 ORTHO05D004988 4.1e-29 132.9 100 67.0
Oeu061093.1 Olea europaea HOM05D004154 ORTHO05D004988 5.3e-29 132.5 150 51.3
SGA_v2.0_scaffold173G39085 Striga asiatica HOM05D004154 ORTHO05D004988 5.3e-29 132.5 148 52.0
CANSAT21G2399 Cannabis sativa HOM05D004154 ORTHO05D004988 7.0e-29 132.1 99 66.7
Gohir.D11G023700 Gossypium hirsutum HOM05D004154 ORTHO05D004988 7.0e-29 132.1 201 42.3
Gohir.A11G024000 Gossypium hirsutum HOM05D004154 ORTHO05D004988 9.1e-29 131.7 201 42.8
VMungo0251G3674 Vigna mungo HOM05D004154 ORTHO05D004988 9.1e-29 131.7 136 55.9
Medtr8g099305 Medicago truncatula HOM05D004154 ORTHO05D004988 1.2e-28 131.3 95 71.6
Thhalv10025168m.g Eutrema salsugineum HOM05D004154 ORTHO05D004988 1.5e-28 131.0 102 64.7
C01p19010 Brassica napus HOM05D004154 ORTHO05D004988 2.6e-28 130.2 102 64.7
BolC1t01827H Brassica oleracea HOM05D004154 ORTHO05D004988 2.6e-28 130.2 102 64.7
Ca_17492_v3 Cicer arietinum L. HOM05D004154 ORTHO05D004988 2.6e-28 130.2 195 44.6
A01p15110 Brassica napus HOM05D004154 ORTHO05D004988 3.5e-28 129.8 102 64.7
BraA01t01449Z Brassica rapa HOM05D004154 ORTHO05D004988 3.5e-28 129.8 102 65.7
PGSC0003DMG400012298 Solanum tuberosum HOM05D004154 ORTHO05D004988 4.5e-28 129.4 93 67.7
Lj4g0021447 Lotus japonicus HOM05D004154 ORTHO05D004988 5.9e-28 129.0 99 66.7
arahy.Tifrunner.gnm1.ann1.Y783I6 Arachis hypogaea HOM05D004154 ORTHO05D004988 7.7e-28 128.6 197 42.1
THA.LOC104806434 Tarenaya hassleriana HOM05D004154 ORTHO05D004988 7.7e-28 128.6 134 55.2
ECA234G2690 Erigeron canadensis HOM05D004154 ORTHO05D004988 1.0e-27 128.3 136 55.9
Hund11402 Selenicereus undatus HOM05D004154 ORTHO05D004988 1.0e-27 128.3 99 65.7
Migut.A00676 Erythranthe guttata HOM05D004154 ORTHO05D004988 1.3e-27 127.9 94 70.2
Phvul.002G296700 Phaseolus vulgaris HOM05D004154 ORTHO05D004988 1.3e-27 127.9 99 64.6
Glyma.05G215500 Glycine max HOM05D004154 ORTHO05D004988 1.7e-27 127.5 111 61.3
Cpa.g.sc122.41 Carica papaya HOM05D004154 ORTHO05D004988 2.2e-27 127.1 152 50.0
BcaC09g50947 Brassica carinata HOM05D004154 ORTHO05D004988 2.9e-27 126.7 102 62.7
GSVIVG01019504001 Vitis vinifera HOM05D004154 ORTHO05D004988 3.8e-27 126.3 102 67.6
Glyma.08G021700 Glycine max HOM05D004154 ORTHO05D004988 8.5e-27 125.2 111 58.6
Sopen08g030360 Solanum pennellii HOM05D004154 ORTHO05D004988 8.5e-27 125.2 93 65.6
Solyc08g082070.3 Solanum lycopersicum HOM05D004154 ORTHO05D004988 1.9e-26 124.0 93 64.5
Zm00001eb238060 Zea mays HOM05D004154 ORTHO05D004988 1.9e-26 124.0 103 64.1
SEGI_25080 Sequoiadendron giganteum HOM05D004154 ORTHO05D004988 3.2e-26 123.2 103 65.0
CAN.G532.100 Capsicum annuum HOM05D004154 ORTHO05D004988 4.2e-26 122.9 92 64.1
Lj8A210T88 Lonicera japonica HOM05D004154 ORTHO05D004988 2.1e-25 120.6 85 72.9
Ciclev10023918m.g Citrus clementina HOM05D004154 ORTHO05D004988 6.1e-25 119.0 99 62.6
MBI07_g24338_MAGBIO Magnolia biondii HOM05D004154 ORTHO05D004988 8.0e-25 118.6 151 49.7
vmacro13908 Vaccinium macrocarpon HOM05D004154 ORTHO05D004988 1.4e-24 117.9 100 61.0
Psat7g026240 Pisum sativum HOM05D004154 ORTHO05D004988 3.9e-24 116.3 100 63.0
ATR1100G049 Amborella trichopoda HOM05D004154 ORTHO05D004988 8.8e-24 115.2 94 59.6
HanXRQChr17g0535161 Helianthus annuus HOM05D004154 ORTHO05D004988 3.3e-23 113.2 136 50.0
MELO3C016306.2 Cucumis melo HOM05D004154 ORTHO05D004988 5.7e-23 112.5 99 57.6
Dinv38854 Davidia involucrata HOM05D000337 ORTHO05D000297 7.4e-23 112.1 241 37.3
MSTRG.25659 Avicennia marina HOM05D004154 ORTHO05D004988 9.7e-23 111.7 102 61.8
DCAR_027717 Daucus carota HOM05D004154 ORTHO05D004988 1.7e-22 110.9 135 49.6
CsaV3_4G006440 Cucumis sativus L. HOM05D004154 ORTHO05D004988 2.2e-22 110.5 99 57.6
AT4G11080 Arabidopsis thaliana HOM05D004154 ORTHO05D004988 2.8e-22 110.2 122 50.0
CARHR255520 Cardamine hirsuta HOM05D004154 ORTHO05D004988 2.8e-22 110.2 123 50.4
Manes.17G117281 Manihot esculenta HOM05D004154 ORTHO05D004988 2.8e-22 110.2 96 61.5
Sp6g06370 Schrenkiella parvula HOM05D004154 ORTHO05D004988 2.8e-22 110.2 122 50.0
Lalb_Chr05g0224221 Lupinus albus HOM05D004154 ORTHO05D004988 8.2e-22 108.6 99 56.6
Carub.0006s2985 Capsella rubella HOM05D004154 ORTHO05D004988 1.1e-21 108.2 120 48.3
Cc08_g15820 Coffea canephora HOM05D004154 ORTHO05D004988 1.1e-21 108.2 121 52.9
AL6G45220 Arabidopsis lyrata HOM05D004154 ORTHO05D004988 1.8e-21 107.5 114 52.6
Potri.003G138000 Populus trichocarpa HOM05D004154 ORTHO05D004988 1.8e-21 107.5 123 48.8
PSO339G6280 Papaver somniferum HOM05D004154 ORTHO05D004988 5.3e-21 105.9 136 49.3
Rhsim07G0083500 Rhododendron simsii HOM05D004154 ORTHO05D004988 5.3e-21 105.9 209 39.2
unitig_32.g11609 Utricularia gibba HOM05D004154 ORTHO05D004988 1.2e-20 104.8 111 53.2
Pp3c7_20570 Physcomitrium patens HOM05D004154 ORTHO05D004988 2.0e-20 104.0 100 54.0
Glyma.01G060600 Glycine max HOM05D004154 ORTHO05D004988 5.9e-20 102.4 100 56.0
MD14G1121900 Malus domestica HOM05D004154 ORTHO05D004988 7.7e-20 102.1 83 63.9
Mapoly0026s0138 Marchantia polymorpha HOM05D004154 ORTHO05D004988 1.3e-19 101.3 99 53.5
Potri.001G093700 Populus trichocarpa HOM05D004154 ORTHO05D004988 1.7e-19 100.9 103 53.4
Pp3c11_8530 Physcomitrium patens HOM05D004154 ORTHO05D004988 2.2e-19 100.5 105 49.5
CDE04G1588 Ceratophyllum demersum HOM05D004154 ORTHO05D004988 2.9e-19 100.1 93 55.9
Sabra01G0069600 Salix brachista HOM05D004154 ORTHO05D004988 2.9e-19 100.1 100 55.0
CDE03G0409 Ceratophyllum demersum HOM05D004154 ORTHO05D004988 6.5e-19 99.0 218 36.2
Sabra13G0046900 Salix brachista HOM05D004154 ORTHO05D004988 3.2e-18 96.7 92 53.3
Sabra05G0040500 Salix brachista HOM05D004154 ORTHO05D004988 3.6e-17 93.2 93 53.8
Sabra17G0001600 Salix brachista HOM05D004154 ORTHO05D004988 1.0e-16 91.7 92 53.3
SMO367G1063 Selaginella moellendorffii HOM05D004154 ORTHO05D004988 1.0e-16 91.7 106 46.2
SEGI_34551 Sequoiadendron giganteum HOM05D004154 ORTHO05D004988 1.0e-16 91.7 108 45.4
SabraUnG0000800 Salix brachista HOM05D004154 ORTHO05D004988 6.3e-14 82.4 63 63.5
Sabra11G0120200 Salix brachista HOM05D004154 ORTHO05D004988 9.1e-13 78.6 53 67.9
Lsat_1_v5_gn_3_10260 Lactuca sativa HOM05D004154 ORTHO05D004988 4.5e-12 76.3 95 50.5
Sabra19G0042900 Salix brachista HOM05D004154 ORTHO05D004988 1.0e-11 75.1 78 51.3
Sabra10G0054600 Salix brachista HOM05D004154 ORTHO05D004988 1.3e-11 74.7 58 62.1
ATR0594G018 Amborella trichopoda HOM05D004154 ORTHO05D004988 6.5e-11 72.4 65 50.8
Sc07g0009970 Simmondsia chinensis HOM05D004154 ORTHO05D004988 3.6e-09 66.6 96 50.0
BcaB01g01584 Brassica carinata HOM05D004154 ORTHO05D004988 4.7e-09 66.2 60 61.7
Sed0012262 Sechium edule HOM05D004154 ORTHO05D004988 1.3e-06 58.2 123 39.0
AL6G14170 Arabidopsis lyrata HOM05D004154 ORTHO05D004988 3.7e-06 56.6 41 56.1


User provided reference genes

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