Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G5773 Papaver somniferum HOM05D003719 ORTHO05D004116 1.2e-86 323.2 166 100.0
PSO732G0588 Papaver somniferum HOM05D003719 ORTHO05D004116 1.2e-54 216.9 166 72.3
PSO017G2223 Papaver somniferum HOM05D003719 ORTHO05D004116 4.0e-34 148.7 205 46.3
PSO732G0471 Papaver somniferum HOM05D003719 ORTHO05D004116 2.0e-33 146.4 193 45.1
PSO732G0498 Papaver somniferum HOM05D003719 ORTHO05D004116 1.0e-32 144.1 193 44.6
PSO732G0548 Papaver somniferum HOM05D003719 ORTHO05D004116 2.2e-32 142.9 192 44.8
PSO349G0045 Papaver somniferum HOM05D003719 ORTHO05D004116 1.4e-26 123.6 212 42.0
PSO017G6528 Papaver somniferum HOM05D003719 ORTHO05D004116 9.0e-18 94.4 267 33.7
PSO170G3936 Papaver somniferum HOM05D033783 ORTHO05D004116 1.5e-17 93.6 161 42.2
PSO170G0628 Papaver somniferum HOM05D003719 ORTHO05D004116 2.0e-17 93.2 279 33.0
THA.LOC104802889 Tarenaya hassleriana HOM05D003719 ORTHO05D004116 2.0e-17 93.2 69 65.2
THA.LOC104820814 Tarenaya hassleriana HOM05D003719 ORTHO05D004116 2.6e-17 92.8 175 38.3
Manes.08G156200 Manihot esculenta HOM05D003719 ORTHO05D004116 1.3e-16 90.5 69 63.8
Manes.09G133700 Manihot esculenta HOM05D003719 ORTHO05D004116 1.3e-16 90.5 84 58.3
FvH4_7g08280 Fragaria vesca HOM05D003719 ORTHO05D004116 2.9e-16 89.4 86 58.1
Sabra19G0054700 Salix brachista HOM05D003719 ORTHO05D004116 2.9e-16 89.4 70 65.7
THA.LOC104827246 Tarenaya hassleriana HOM05D003719 ORTHO05D004116 2.9e-16 89.4 176 35.8
TAR629G0070 Trochodendron aralioides HOM05D003719 ORTHO05D004116 2.9e-16 89.4 92 54.3
Ciclev10031549m.g Citrus clementina HOM05D003719 ORTHO05D004116 3.8e-16 89.0 67 64.2
Sabra13G0061200 Salix brachista HOM05D003719 ORTHO05D004116 3.8e-16 89.0 97 52.6
Hma1.2p1_0128F.1_g060060 Hydrangea macrophylla HOM05D003719 ORTHO05D004116 5.0e-16 88.6 76 63.2
Potri.019G044400 Populus trichocarpa HOM05D003719 ORTHO05D004116 5.0e-16 88.6 97 52.6
Thecc.05G235300 Theobroma cacao HOM05D003719 ORTHO05D004116 5.0e-16 88.6 68 63.2
TWI32G1338 Tripterygium wilfordii HOM05D003719 ORTHO05D004116 5.0e-16 88.6 69 62.3
Gohir.A11G301800 Gossypium hirsutum HOM05D003719 ORTHO05D004116 6.5e-16 88.2 68 63.2
Gohir.D11G317400 Gossypium hirsutum HOM05D003719 ORTHO05D004116 6.5e-16 88.2 68 63.2
Gorai.007G347200 Gossypium raimondii HOM05D003719 ORTHO05D004116 6.5e-16 88.2 68 63.2
CDE11G0837 Ceratophyllum demersum HOM05D003719 ORTHO05D004116 8.5e-16 87.8 85 51.8
MBI04_g06283_MAGBIO Magnolia biondii HOM05D003719 ORTHO05D004116 8.5e-16 87.8 69 59.4
QL04p053441 Quercus lobata HOM05D003719 ORTHO05D004116 8.5e-16 87.8 85 57.6
Sed0012975 Sechium edule HOM05D003719 ORTHO05D004116 8.5e-16 87.8 96 50.0
Duzib177G0203 Durio zibethinus HOM05D003719 ORTHO05D004116 1.1e-15 87.4 68 63.2
Glyma.16G079900 Glycine max HOM05D003719 ORTHO05D004116 1.1e-15 87.4 82 57.3
RcHm_v2.0_Chr1g0340791 Rosa chinensis HOM05D003719 ORTHO05D004116 1.1e-15 87.4 98 52.0
ClCG05G002450 Citrullus lanatus HOM05D003719 ORTHO05D004116 1.4e-15 87.0 73 58.9
DCAR_025000 Daucus carota HOM05D003719 ORTHO05D004116 1.4e-15 87.0 74 58.1
TWI60G0027 Tripterygium wilfordii HOM05D003719 ORTHO05D004116 1.4e-15 87.0 69 60.9
HPP92_020485 Vanilla planifolia HOM05D003719 ORTHO05D004116 1.4e-15 87.0 74 55.4
CANSAT25G2268 Cannabis sativa HOM05D003719 ORTHO05D004116 1.9e-15 86.7 70 62.9
Cpa.g.sc73.30 Carica papaya HOM05D003719 ORTHO05D004116 1.9e-15 86.7 92 52.2
MELO3C022484.2 Cucumis melo HOM05D003719 ORTHO05D004116 1.9e-15 86.7 83 54.2
CsaV3_6G006350 Cucumis sativus L. HOM05D003719 ORTHO05D004116 1.9e-15 86.7 83 54.2
Dinv43515 Davidia involucrata HOM05D003719 ORTHO05D004116 1.9e-15 86.7 73 61.6
ClCG06G000580 Citrullus lanatus HOM05D003719 ORTHO05D004116 2.5e-15 86.3 98 51.0
Duzib128G0107 Durio zibethinus HOM05D003719 ORTHO05D004116 2.5e-15 86.3 85 56.5
Potri.013G070400 Populus trichocarpa HOM05D003719 ORTHO05D004116 2.5e-15 86.3 97 50.5
Aa31LG11G11940 Aethionema arabicum HOM05D003719 ORTHO05D004116 3.2e-15 85.9 220 34.1
AL6G28780 Arabidopsis lyrata HOM05D003719 ORTHO05D004116 3.2e-15 85.9 87 54.0
AT5G17690 Arabidopsis thaliana HOM05D003719 ORTHO05D004116 3.2e-15 85.9 87 54.0
Haze_15777 Corylus avellana HOM05D003719 ORTHO05D004116 3.2e-15 85.9 165 40.6
MD07G1081800 Malus domestica HOM05D003719 ORTHO05D004116 3.2e-15 85.9 88 55.7
PSO017G2979 Papaver somniferum HOM05D033783 ORTHO05D004116 3.2e-15 85.9 156 41.7
PGR042G1172 Punica granatum HOM05D003719 ORTHO05D004116 3.2e-15 85.9 161 38.5
Sp6g26530 Schrenkiella parvula HOM05D003719 ORTHO05D004116 3.2e-15 85.9 98 52.0
CARHR195490 Cardamine hirsuta HOM05D003719 ORTHO05D004116 4.2e-15 85.5 71 60.6
Dinv43958 Davidia involucrata HOM05D003719 ORTHO05D004116 4.2e-15 85.5 69 58.0
Glyma.03G094200 Glycine max HOM05D003719 ORTHO05D004116 4.2e-15 85.5 82 56.1
Glyma.04G002100 Glycine max HOM05D003719 ORTHO05D004116 4.2e-15 85.5 70 61.4
Atru.chr2.1627 Acer truncatum HOM05D003719 ORTHO05D004116 5.5e-15 85.1 67 61.2
MD02G1231000 Malus domestica HOM05D003719 ORTHO05D004116 5.5e-15 85.1 88 55.7
Nitab4.5_0000792g0110 Nicotiana tabacum HOM05D003719 ORTHO05D004116 5.5e-15 85.1 76 56.6
PGSC0003DMG400031514 Solanum tuberosum HOM05D003719 ORTHO05D004116 5.5e-15 85.1 69 62.3
DCAR_015727 Daucus carota HOM05D003719 ORTHO05D004116 7.2e-15 84.7 101 46.5
Lj3g0017682 Lotus japonicus HOM05D003719 ORTHO05D004116 7.2e-15 84.7 81 56.8
Nitab4.5_0000050g0180 Nicotiana tabacum HOM05D003719 ORTHO05D004116 7.2e-15 84.7 73 58.9
GSVIVG01019328001 Vitis vinifera HOM05D003719 ORTHO05D004116 7.2e-15 84.7 101 41.6
Actinidia31730 Actinidia chinensis HOM05D003719 ORTHO05D004116 9.4e-15 84.3 73 58.9
arahy.Tifrunner.gnm1.ann1.U92JU2 Arachis hypogaea HOM05D003719 ORTHO05D004116 9.4e-15 84.3 73 56.2
Actinidia05832 Actinidia chinensis HOM05D003719 ORTHO05D004116 1.2e-14 84.0 73 58.9
Lj9A617T60 Lonicera japonica HOM05D003719 ORTHO05D004116 1.2e-14 84.0 69 58.0
Phvul.009G117500 Phaseolus vulgaris HOM05D003719 ORTHO05D004116 1.2e-14 84.0 73 60.3
Sed0010466 Sechium edule HOM05D003719 ORTHO05D004116 1.2e-14 84.0 96 50.0
Sed0017190 Sechium edule HOM05D003719 ORTHO05D004116 1.2e-14 84.0 217 32.7
arahy.Tifrunner.gnm1.ann1.N569AS Arachis hypogaea HOM05D003719 ORTHO05D004116 1.6e-14 83.6 82 48.8
Glyma.06G001700 Glycine max HOM05D003719 ORTHO05D004116 1.6e-14 83.6 163 39.9
Solyc10g024470.3 Solanum lycopersicum HOM05D003719 ORTHO05D004116 1.6e-14 83.6 69 59.4
Sopen10g009690 Solanum pennellii HOM05D003719 ORTHO05D004116 1.6e-14 83.6 69 59.4
Carub.0006s1593 Capsella rubella HOM05D003719 ORTHO05D004116 2.1e-14 83.2 70 61.4
DCAR_029570 Daucus carota HOM05D003719 ORTHO05D004116 2.1e-14 83.2 101 47.5
Oeu034882.1 Olea europaea HOM05D003719 ORTHO05D004116 2.1e-14 83.2 107 43.9
Thhalv10013571m.g Eutrema salsugineum HOM05D003719 ORTHO05D004116 2.7e-14 82.8 70 61.4
Glyma.03G111600 Glycine max HOM05D003719 ORTHO05D004116 2.7e-14 82.8 161 35.4
Nitab4.5_0025236g0010 Nicotiana tabacum HOM05D003719 ORTHO05D004116 2.7e-14 82.8 83 53.0
BcaC04g18768 Brassica carinata HOM05D003719 ORTHO05D004116 3.6e-14 82.4 73 60.3
A10p21730 Brassica napus HOM05D003719 ORTHO05D004116 3.6e-14 82.4 73 60.3
C09p59480 Brassica napus HOM05D003719 ORTHO05D004116 3.6e-14 82.4 73 60.3
BolC9t58786H Brassica oleracea HOM05D003719 ORTHO05D004116 3.6e-14 82.4 73 60.3
BraA10t44234Z Brassica rapa HOM05D003719 ORTHO05D004116 3.6e-14 82.4 73 60.3
Eucgr.E01743 Eucalyptus grandis HOM05D003719 ORTHO05D004116 3.6e-14 82.4 83 54.2
VMungo0331G0617 Vigna mungo HOM05D003719 ORTHO05D004116 3.6e-14 82.4 80 55.0
Phvul.010G034600 Phaseolus vulgaris HOM05D003719 ORTHO05D004116 6.1e-14 81.6 80 55.0
BcaB08g36751 Brassica carinata HOM05D003719 ORTHO05D004116 7.9e-14 81.3 153 37.3
Os10g0324900 Oryza sativa ssp. japonica HOM05D003719 ORTHO05D004116 7.9e-14 81.3 73 53.4
TPR.G38555 Trifolium pratense HOM05D001257 ORTHO05D005285 7.9e-14 81.3 211 30.3
MSTRG.4990 Avicennia marina HOM05D003719 ORTHO05D004116 1.0e-13 80.9 72 59.7
BcaC03g13534 Brassica carinata HOM05D003719 ORTHO05D004116 1.0e-13 80.9 94 47.9
A02p04380 Brassica napus HOM05D003719 ORTHO05D004116 1.0e-13 80.9 94 47.9
C02p09250 Brassica napus HOM05D003719 ORTHO05D004116 1.0e-13 80.9 94 47.9
BolC2t06833H Brassica oleracea HOM05D003719 ORTHO05D004116 1.0e-13 80.9 94 47.9
BraA02t05402Z Brassica rapa HOM05D003719 ORTHO05D004116 1.0e-13 80.9 94 47.9
CsaV3_3G009890 Cucumis sativus L. HOM05D002544 ORTHO05D007277 1.0e-13 80.9 71 52.1
Migut.N01648 Erythranthe guttata HOM05D003719 ORTHO05D004116 1.0e-13 80.9 75 56.0
HanXRQChr04g0117621 Helianthus annuus HOM05D003719 ORTHO05D004116 1.0e-13 80.9 76 53.9
Cc02_g26500 Coffea canephora HOM05D003719 ORTHO05D004116 1.4e-13 80.5 68 55.9
BcaB01g05152 Brassica carinata HOM05D003719 ORTHO05D004116 1.8e-13 80.1 67 53.7
BolC3t13474H Brassica oleracea HOM05D003719 ORTHO05D004116 1.8e-13 80.1 67 53.7
Nn7g37398 Nelumbo nucifera HOM05D003719 ORTHO05D004116 1.8e-13 80.1 57 63.2
SHI54853 Sapria himalayana HOM05D003719 ORTHO05D004116 2.3e-13 79.7 68 60.3
Ah.05g177100 Amaranthus hybridus HOM05D003719 ORTHO05D004116 3.0e-13 79.3 195 32.3
HanXRQChr11g0343451 Helianthus annuus HOM05D003719 ORTHO05D004116 3.0e-13 79.3 84 52.4
Nn1g09363 Nelumbo nucifera HOM05D003719 ORTHO05D004116 3.0e-13 79.3 73 56.2
ATR0568G049 Amborella trichopoda HOM05D003719 ORTHO05D004116 3.9e-13 79.0 122 36.9
ECA236G3956 Erigeron canadensis HOM05D001257 ORTHO05D005285 3.9e-13 79.0 68 52.9
VMungo1309G0350 Vigna mungo HOM05D003719 ORTHO05D004116 3.9e-13 79.0 77 54.5
Aqoxy7G02508 Aquilegia oxysepala HOM05D003719 ORTHO05D004116 5.1e-13 78.6 56 58.9
PGSC0003DMG400031112 Solanum tuberosum HOM05D003719 ORTHO05D004116 6.7e-13 78.2 73 54.8
Migut.O00699 Erythranthe guttata HOM05D003719 ORTHO05D004116 8.8e-13 77.8 75 53.3
A03p08460 Brassica napus HOM05D003719 ORTHO05D004116 1.1e-12 77.4 66 53.0
BraA03t10169Z Brassica rapa HOM05D003719 ORTHO05D004116 1.1e-12 77.4 66 53.0
BraA09t37591Z Brassica rapa HOM05D003719 ORTHO05D004116 1.5e-12 77.0 79 53.2
BraA09t38097Z Brassica rapa HOM05D003719 ORTHO05D004116 1.5e-12 77.0 79 53.2
SEGI_28532 Sequoiadendron giganteum HOM05D003719 ORTHO05D004116 1.5e-12 77.0 56 58.9
Sc02g0003460 Simmondsia chinensis HOM05D003719 ORTHO05D004116 2.0e-12 76.6 84 50.0
CiPaw.02G047600 Carya illinoinensis HOM05D003719 ORTHO05D004116 3.3e-12 75.9 70 61.4
Ca_23168_v3 Cicer arietinum L. HOM05D003719 ORTHO05D004116 3.3e-12 75.9 74 52.7
HanXRQChr04g0117671 Helianthus annuus HOM05D003719 ORTHO05D004116 4.3e-12 75.5 86 43.0
Solyc01g081500.4 Solanum lycopersicum HOM05D003719 ORTHO05D004116 4.3e-12 75.5 70 55.7
Sopen01g033060 Solanum pennellii HOM05D003719 ORTHO05D004116 4.3e-12 75.5 70 55.7
ECA248G2234 Erigeron canadensis HOM05D003719 ORTHO05D004116 5.7e-12 75.1 85 47.1
Psat5g001120 Pisum sativum HOM05D003719 ORTHO05D004116 7.4e-12 74.7 186 32.3
Mapoly0009s0028 Marchantia polymorpha HOM05D003719 ORTHO05D004116 1.7e-11 73.6 66 48.5
Oeu020240.1 Olea europaea HOM05D003719 ORTHO05D004116 1.7e-11 73.6 120 40.0
TPR.G9787 Trifolium pratense HOM05D003719 ORTHO05D004116 1.7e-11 73.6 80 47.5
PSO017G0756 Papaver somniferum HOM05D003719 ORTHO05D004116 3.7e-11 72.4 72 54.2
Lalb_Chr13g0290921 Lupinus albus HOM05D003719 ORTHO05D004116 4.8e-11 72.0 90 46.7
Hund17170 Selenicereus undatus HOM05D003719 ORTHO05D000105 4.8e-11 72.0 90 46.7
FAN06G0622 Fragaria x ananassa HOM05D003719 ORTHO05D004116 1.1e-10 70.9 104 47.1
Lalb_Chr10g0091841 Lupinus albus HOM05D003719 ORTHO05D004116 1.4e-10 70.5 53 52.8
Pp3c9_6410 Physcomitrium patens HOM05D003719 ORTHO05D004116 1.4e-10 70.5 159 36.5
EL10Ac1g00661 Beta vulgaris HOM05D003719 ORTHO05D004116 2.4e-10 69.7 115 36.5
FAN10G3972 Fragaria x ananassa HOM05D003719 ORTHO05D004116 2.4e-10 69.7 98 48.0
Oeu024948.1 Olea europaea HOM05D003719 ORTHO05D004116 2.4e-10 69.7 72 50.0
Oeu032776.1 Olea europaea HOM05D003719 ORTHO05D004116 2.4e-10 69.7 68 48.5
Oeu045633.2 Olea europaea HOM05D003719 ORTHO05D004116 3.1e-10 69.3 83 45.8
Lalb_Chr13g0290971 Lupinus albus HOM05D003719 ORTHO05D004116 4.1e-10 68.9 66 51.5
Lalb_Chr07g0194591 Lupinus albus HOM05D003719 ORTHO05D004116 9.1e-10 67.8 74 40.5
Psat4g207560 Pisum sativum HOM05D003719 ORTHO05D004116 9.1e-10 67.8 95 43.2
Mapoly0024s0010 Marchantia polymorpha HOM05D003719 ORTHO05D004116 1.5e-09 67.0 86 40.7
Lalb_Chr12g0210141 Lupinus albus HOM05D003719 ORTHO05D004116 2.0e-09 66.6 88 38.6
unitig_0.g1580 Utricularia gibba HOM05D003719 ORTHO05D004116 2.0e-09 66.6 166 34.3
Lalb_Chr23g0264911 Lupinus albus HOM05D003719 ORTHO05D004116 2.6e-09 66.2 64 48.4
BcaB01g04909 Brassica carinata HOM05D003719 ORTHO05D004116 3.4e-09 65.9 117 35.9
Mapoly0010s0167 Marchantia polymorpha HOM05D003719 ORTHO05D004116 4.5e-09 65.5 86 39.5
SEGI_39270 Sequoiadendron giganteum HOM05D003719 ORTHO05D004116 5.9e-09 65.1 63 54.0
Lsat_1_v5_gn_1_89600 Lactuca sativa HOM05D003719 ORTHO05D004116 1.0e-08 64.3 65 50.8
Lsat_1_v5_gn_7_34101 Lactuca sativa HOM05D003719 ORTHO05D004116 5.0e-08 62.0 76 47.4
Peaxi162Scf00907g00023 Petunia axillaris HOM05D003719 ORTHO05D004116 1.4e-07 60.5 71 47.9
FAN01G0294 Fragaria x ananassa HOM05D003719 ORTHO05D004116 2.5e-07 59.7 108 42.6
Rhsim07G0047900 Rhododendron simsii HOM05D003719 ORTHO05D004116 2.5e-07 59.7 85 41.2
arahy.Tifrunner.gnm1.ann1.FLAY3S Arachis hypogaea HOM05D003719 ORTHO05D004116 5.5e-07 58.5 76 35.5
C03p09860 Brassica napus HOM05D003719 ORTHO05D004116 5.5e-07 58.5 67 46.3
SGA_v2.0_scaffold95G28748 Striga asiatica HOM05D003719 ORTHO05D004116 5.5e-07 58.5 75 48.0
arahy.Tifrunner.gnm1.ann1.RGD672 Arachis hypogaea HOM05D022377 ORTHO05D004116 7.2e-07 58.2 87 31.0


User provided reference genes

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