Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G5462 Papaver somniferum HOM05D006642 ORTHO05D008856 1.5e-144 517.3 532 100.0
PSO541G5267 Papaver somniferum HOM05D006642 ORTHO05D008856 4.2e-139 499.2 531 98.7
Nn4g26621 Nelumbo nucifera HOM05D006642 ORTHO05D008856 8.5e-108 395.2 331 77.0
TAR624G0481 Trochodendron aralioides HOM05D006642 ORTHO05D008856 3.2e-107 393.3 331 78.2
Aqoxy5G04293 Aquilegia oxysepala HOM05D006642 ORTHO05D008856 2.3e-100 370.5 332 74.4
MBI02_g40097_MAGBIO Magnolia biondii HOM05D006642 ORTHO05D008856 3.8e-100 369.8 331 74.9
Hma1.2p1_0073F.1_g038540 Hydrangea macrophylla HOM05D006642 ORTHO05D008856 5.0e-100 369.4 316 77.5
CSS0001521 Camellia sinensis var. sinensis HOM05D006642 ORTHO05D008856 6.1e-98 362.5 325 75.1
CSS0049788 Camellia sinensis var. sinensis HOM05D006642 ORTHO05D008856 6.1e-98 362.5 325 75.1
MSTRG.6613 Avicennia marina HOM05D006642 ORTHO05D008856 5.2e-97 359.4 325 74.2
CDE05G1065 Ceratophyllum demersum HOM05D006642 ORTHO05D008856 3.4e-96 356.7 332 74.7
Potri.001G220300 Populus trichocarpa HOM05D006642 ORTHO05D008856 5.7e-96 355.9 319 73.7
Nitab4.5_0001843g0110 Nicotiana tabacum HOM05D006642 ORTHO05D008856 1.7e-95 354.4 302 77.8
Nitab4.5_0007665g0020 Nicotiana tabacum HOM05D006642 ORTHO05D008856 1.7e-95 354.4 302 77.8
Dinv09723 Davidia involucrata HOM05D006642 ORTHO05D008856 2.2e-95 354.0 326 73.9
CANSAT64G1219 Cannabis sativa HOM05D006642 ORTHO05D008856 3.7e-95 353.2 317 74.1
Solyc07g043600.4 Solanum lycopersicum HOM05D006642 ORTHO05D008856 4.9e-95 352.8 321 73.8
Sopen07g023170 Solanum pennellii HOM05D006642 ORTHO05D008856 6.3e-95 352.4 321 73.8
PGSC0003DMG400015924 Solanum tuberosum HOM05D006642 ORTHO05D008856 6.3e-95 352.4 321 73.8
Oeu051395.1 Olea europaea HOM05D006642 ORTHO05D008856 8.3e-95 352.1 302 77.2
Cc05_g00360 Coffea canephora HOM05D006642 ORTHO05D008856 1.1e-94 351.7 302 75.8
ClCG11G016650 Citrullus lanatus HOM05D006642 ORTHO05D008856 1.8e-94 350.9 317 79.2
ATR1098G151 Amborella trichopoda HOM05D006642 ORTHO05D008856 1.6e-93 347.8 331 69.5
Ciclev10014674m.g Citrus clementina HOM05D006642 ORTHO05D008856 1.6e-93 347.8 324 72.8
CAN.G819.5 Capsicum annuum HOM05D006642 ORTHO05D008856 2.7e-93 347.1 302 76.8
TWI23G0590 Tripterygium wilfordii HOM05D006642 ORTHO05D008856 4.5e-93 346.3 315 74.0
Os08g0191900 Oryza sativa ssp. japonica HOM05D006642 ORTHO05D008856 2.3e-92 344.0 324 72.8
Atru.chr6.2750 Acer truncatum HOM05D006642 ORTHO05D008856 2.9e-92 343.6 319 73.7
Actinidia39996 Actinidia chinensis HOM05D006642 ORTHO05D008856 3.9e-92 343.2 325 71.1
DCAR_023000 Daucus carota HOM05D006642 ORTHO05D008856 3.9e-92 343.2 308 73.7
Sabra16G0124100 Salix brachista HOM05D006642 ORTHO05D008856 3.9e-92 343.2 302 75.8
Manes.09G006600 Manihot esculenta HOM05D006642 ORTHO05D008856 5.0e-92 342.8 319 71.8
Sed0004539 Sechium edule HOM05D006642 ORTHO05D008856 6.6e-92 342.4 302 74.8
vmacro19989 Vaccinium macrocarpon HOM05D006642 ORTHO05D008856 1.1e-91 341.7 333 70.9
arahy.Tifrunner.gnm1.ann1.T7AVMG Arachis hypogaea HOM05D006642 ORTHO05D008856 1.5e-91 341.3 302 74.5
ECA248G0755 Erigeron canadensis HOM05D006642 ORTHO05D008856 1.5e-91 341.3 299 76.3
RcHm_v2.0_Chr2g0152561 Rosa chinensis HOM05D006642 ORTHO05D008856 1.9e-91 340.9 317 77.6
Sp5g03940 Schrenkiella parvula HOM05D006642 ORTHO05D008856 1.9e-91 340.9 320 73.4
CsaV3_4G032160 Cucumis sativus L. HOM05D006642 ORTHO05D008856 4.3e-91 339.7 317 77.3
Glyma.20G103800 Glycine max HOM05D006642 ORTHO05D008856 4.3e-91 339.7 305 73.4
C08p34230 Brassica napus HOM05D006642 ORTHO05D008856 5.6e-91 339.3 320 79.4
HanXRQChr01g0029361 Helianthus annuus HOM05D006642 ORTHO05D008856 1.2e-90 338.2 298 75.5
Lsat_1_v5_gn_1_49160 Lactuca sativa HOM05D006642 ORTHO05D008856 1.6e-90 337.8 323 65.9
Zm00001eb413390 Zea mays HOM05D006642 ORTHO05D008856 1.6e-90 337.8 331 70.1
A09p51470 Brassica napus HOM05D006642 ORTHO05D008856 2.1e-90 337.4 320 79.4
MD09G1145700 Malus domestica HOM05D006642 ORTHO05D008856 2.1e-90 337.4 317 71.0
Glyma.10G285200 Glycine max HOM05D006642 ORTHO05D008856 2.8e-90 337.0 305 72.5
HPP92_011054 Vanilla planifolia HOM05D006642 ORTHO05D008856 2.8e-90 337.0 331 68.9
Thhalv10005856m.g Eutrema salsugineum HOM05D006642 ORTHO05D008856 6.1e-90 335.9 320 72.5
CARHR169450 Cardamine hirsuta HOM05D006642 ORTHO05D008856 8.0e-90 335.5 320 72.5
VMungo0720G2195 Vigna mungo HOM05D000164 ORTHO05D000096 8.0e-90 335.5 308 71.4
FAN02G0564 Fragaria x ananassa HOM05D006642 ORTHO05D008856 1.0e-89 335.1 317 77.6
Phvul.007G015300 Phaseolus vulgaris HOM05D006642 ORTHO05D008856 1.0e-89 335.1 308 71.4
BolC8t51020H Brassica oleracea HOM05D006642 ORTHO05D008856 4.0e-89 333.2 317 78.9
Cfa023538 Carpinus fangiana HOM05D006642 ORTHO05D008856 4.0e-89 333.2 318 71.1
Lj5g0013784 Lotus japonicus HOM05D006642 ORTHO05D008856 4.0e-89 333.2 306 72.9
SGA_v2.0_scaffold73G24452 Striga asiatica HOM05D006642 ORTHO05D008856 4.0e-89 333.2 310 71.0
FAN14G1916 Fragaria x ananassa HOM05D006642 ORTHO05D008856 5.2e-89 332.8 317 77.6
PGR142G3441 Punica granatum HOM05D006642 ORTHO05D008856 5.2e-89 332.8 318 70.4
Carub.0005s2580 Capsella rubella HOM05D006642 ORTHO05D008856 6.8e-89 332.4 320 72.5
FAN05G5081 Fragaria x ananassa HOM05D006642 ORTHO05D008856 1.2e-88 331.6 317 77.3
FvH4_6g38970 Fragaria vesca HOM05D006642 ORTHO05D008856 1.5e-88 331.3 317 77.3
BcaC07g40235 Brassica carinata HOM05D006642 ORTHO05D008856 2.0e-88 330.9 320 78.4
Prupe.3G180100 Prunus persica HOM05D006642 ORTHO05D008856 5.8e-88 329.3 317 71.0
unitig_899.g15288 Utricularia gibba HOM05D006642 ORTHO05D008856 5.8e-88 329.3 300 73.3
Ca_11227_v3 Cicer arietinum L. HOM05D006642 ORTHO05D008856 3.7e-87 326.6 302 72.5
AT3G59040 Arabidopsis thaliana HOM05D006642 ORTHO05D008856 8.3e-87 325.5 320 71.2
Eucgr.K01239 Eucalyptus grandis HOM05D006642 ORTHO05D008856 2.4e-86 323.9 324 70.1
THA.LOC104802288 Tarenaya hassleriana HOM05D006642 ORTHO05D008856 2.4e-86 323.9 303 75.6
Aa31LG10G13530 Aethionema arabicum HOM05D006642 ORTHO05D008856 3.2e-86 323.6 320 70.9
BraA09t40583Z Brassica rapa HOM05D006642 ORTHO05D008856 3.2e-86 323.6 320 77.2
COL.COLO4_29911 Corchorus olitorius HOM05D006642 ORTHO05D008856 4.1e-86 323.2 325 69.5
BcaC07g40308 Brassica carinata HOM05D006642 ORTHO05D008856 1.6e-85 321.2 292 82.5
Medtr1g114300 Medicago truncatula HOM05D006642 ORTHO05D008856 2.0e-85 320.9 305 70.5
AUR62002293 Chenopodium quinoa HOM05D006642 ORTHO05D008856 3.5e-85 320.1 297 72.7
Rhsim05G0172300 Rhododendron simsii HOM05D006642 ORTHO05D008856 3.5e-85 320.1 302 78.5
Thecc.01G164600 Theobroma cacao HOM05D006642 ORTHO05D008856 4.6e-85 319.7 294 73.5
Sc14g0005210 Simmondsia chinensis HOM05D006642 ORTHO05D008856 6.0e-85 319.3 301 71.4
Duzib147G0394 Durio zibethinus HOM05D006642 ORTHO05D008856 1.7e-84 317.8 295 66.4
Gorai.012G039700 Gossypium raimondii HOM05D006642 ORTHO05D008856 2.3e-84 317.4 294 74.1
Lalb_Chr06g0163881 Lupinus albus HOM05D006642 ORTHO05D008856 1.1e-83 315.1 297 71.7
Gohir.A05G380400 Gossypium hirsutum HOM05D006642 ORTHO05D008856 1.5e-83 314.7 294 74.1
Psat6g233520 Pisum sativum HOM05D006642 ORTHO05D008856 1.5e-83 314.7 302 70.2
Gohir.D04G035200 Gossypium hirsutum HOM05D006642 ORTHO05D008856 2.5e-83 313.9 294 73.8
GSVIVG01020809001 Vitis vinifera HOM05D006642 ORTHO05D008856 5.6e-83 312.8 304 72.7
AUR62015397 Chenopodium quinoa HOM05D006642 ORTHO05D008856 3.6e-82 310.1 328 52.1
Ah.07g201920 Amaranthus hybridus HOM05D006642 ORTHO05D008856 4.7e-82 309.7 302 70.5
Ah.07g198470 Amaranthus hybridus HOM05D006642 ORTHO05D008856 1.4e-81 308.1 302 54.0
Migut.M00108 Erythranthe guttata HOM05D006642 ORTHO05D008856 2.3e-81 307.4 325 51.7
Hund08483 Selenicereus undatus HOM05D006642 ORTHO05D008856 3.1e-81 307.0 319 67.7
EL10Ac8g19571 Beta vulgaris HOM05D006642 ORTHO05D008856 1.3e-79 301.6 316 68.0
TPR.G4069 Trifolium pratense HOM05D006642 ORTHO05D008856 6.4e-79 299.3 302 66.9
QL02p091883 Quercus lobata HOM05D006642 ORTHO05D008856 1.6e-77 294.7 306 75.2
QL93p2017_0027 Quercus lobata HOM05D006642 ORTHO05D008856 3.6e-74 283.5 291 75.9
MELO3C026387.2 Cucumis melo HOM05D006642 ORTHO05D008856 4.4e-72 276.6 282 77.0
Cpa.g.sc50.124 Carica papaya HOM05D006642 ORTHO05D008856 1.5e-67 261.5 322 52.8
MD17G1132200 Malus domestica HOM05D006642 ORTHO05D008856 2.4e-65 254.2 290 61.7
Lj1A585G41 Lonicera japonica HOM05D006642 ORTHO05D008856 6.8e-65 252.7 148 81.8
Nn4g26620 Nelumbo nucifera HOM05D006642 ORTHO05D008856 5.1e-60 236.5 136 83.1
EL10Ac5g11659 Beta vulgaris HOM05D006642 ORTHO05D008856 1.4e-54 218.4 148 71.6
HPP92_011074 Vanilla planifolia HOM05D006642 ORTHO05D008856 4.6e-53 213.4 161 62.7
Haze_13626 Corylus avellana HOM05D006642 ORTHO05D008856 1.5e-51 208.4 210 76.2
AL5G40920 Arabidopsis lyrata HOM05D006642 ORTHO05D008856 2.4e-41 174.5 195 75.9
FAN09G4833 Fragaria x ananassa HOM05D006642 ORTHO05D008856 1.0e-31 142.5 147 53.7
Pp3c26_11100 Physcomitrium patens HOM05D006642 ORTHO05D008856 5.5e-30 136.7 262 48.1
CiPaw.03G197600 Carya illinoinensis HOM05D006642 ORTHO05D008856 1.6e-29 135.2 102 65.7
C06p25860 Brassica napus HOM05D000461 ORTHO05D001840 2.5e-27 127.9 257 35.4
BcaC08g44955 Brassica carinata HOM05D006642 ORTHO05D008856 1.3e-26 125.6 82 72.0
EL10Ac5g11660 Beta vulgaris HOM05D006642 ORTHO05D008856 6.3e-26 123.2 102 60.8
Mapoly0047s0104 Marchantia polymorpha HOM05D006642 ORTHO05D008856 9.0e-25 119.4 261 46.7
BcaB02g07487 Brassica carinata HOM05D000461 ORTHO05D001840 6.5e-23 113.2 78 70.5
SMO259G0047 Selaginella moellendorffii HOM05D006642 ORTHO05D008856 4.6e-21 107.1 263 43.3
BcaB02g07488 Brassica carinata HOM05D006642 ORTHO05D008856 3.9e-20 104.0 65 76.9
BolC6t37747H Brassica oleracea HOM05D006642 ORTHO05D032904 2.0e-16 91.7 52 80.8
BcaC08g44954 Brassica carinata HOM05D006642 ORTHO05D032904 4.1e-09 67.4 36 83.3
Lj5g0013792 Lotus japonicus HOM05D006642 ORTHO05D008856 5.0e-07 60.5 48 56.2


User provided reference genes

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