Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G3227 Papaver somniferum HOM05D006314 ORTHO05D007970 4.2e-146 521.5 304 100.0
PSO541G6217 Papaver somniferum HOM05D006314 ORTHO05D007970 2.4e-141 505.8 301 98.0
Gohir.A06G145000 Gossypium hirsutum HOM05D006314 ORTHO05D007970 3.7e-78 295.8 293 61.4
Gorai.010G176200 Gossypium raimondii HOM05D006314 ORTHO05D007970 1.3e-75 287.3 275 62.9
Duzib235G0913 Durio zibethinus HOM05D006314 ORTHO05D007970 1.2e-73 280.8 261 64.8
COL.COLO4_31719 Corchorus olitorius HOM05D006314 ORTHO05D007970 6.2e-73 278.5 295 60.7
CiPaw.09G085200 Carya illinoinensis HOM05D006314 ORTHO05D007970 1.1e-69 267.7 268 59.0
Aqoxy5G01372 Aquilegia oxysepala HOM05D006314 ORTHO05D007970 1.9e-69 266.9 285 57.9
QL05p075316 Quercus lobata HOM05D006314 ORTHO05D007970 3.2e-69 266.2 253 62.5
CiPaw.09G086300 Carya illinoinensis HOM05D006314 ORTHO05D007970 9.3e-69 264.6 256 59.8
Potri.004G039400 Populus trichocarpa HOM05D006314 ORTHO05D007970 4.6e-68 262.3 255 60.8
CAN.G404.73 Capsicum annuum HOM05D006314 ORTHO05D007970 1.3e-67 260.8 254 60.2
GSVIVG01012621001 Vitis vinifera HOM05D006314 ORTHO05D007970 1.7e-67 260.4 280 56.1
Cfa021643 Carpinus fangiana HOM05D006314 ORTHO05D007970 3.0e-67 259.6 253 61.7
Prupe.4G027100 Prunus persica HOM05D006314 ORTHO05D007970 6.6e-67 258.5 266 59.8
SGA_v2.0_scaffold7G03887 Striga asiatica HOM05D006314 ORTHO05D007970 7.3e-66 255.0 294 53.7
Nn1g03656 Nelumbo nucifera HOM05D006314 ORTHO05D007970 9.6e-66 254.6 284 54.6
Hund21374 Selenicereus undatus HOM05D006314 ORTHO05D007970 2.8e-65 253.1 248 52.8
Sabra04G0024200 Salix brachista HOM05D006314 ORTHO05D007970 4.8e-65 252.3 323 46.1
Haze_06726 Corylus avellana HOM05D006314 ORTHO05D007970 1.1e-64 251.1 330 51.2
MBI02_g34312_MAGBIO Magnolia biondii HOM05D006314 ORTHO05D007970 1.1e-64 251.1 268 64.2
Gohir.D06G151200 Gossypium hirsutum HOM05D006314 ORTHO05D007970 5.3e-64 248.8 163 71.2
Oeu002711.1 Olea europaea HOM05D006314 ORTHO05D007970 1.2e-63 247.7 252 65.5
MD05G1340500 Malus domestica HOM05D006314 ORTHO05D007970 2.6e-63 246.5 246 65.0
Manes.14G141100 Manihot esculenta HOM05D006314 ORTHO05D007970 3.4e-63 246.1 256 56.2
Cpa.g.sc81.24 Carica papaya HOM05D006314 ORTHO05D007970 8.4e-62 241.5 254 52.0
Ciclev10018286m.g Citrus clementina HOM05D006314 ORTHO05D007970 4.2e-61 239.2 259 58.7
ECA236G4636 Erigeron canadensis HOM05D006314 ORTHO05D007970 7.1e-61 238.4 252 54.4
HanXRQChr05g0130041 Helianthus annuus HOM05D006314 ORTHO05D007970 9.3e-61 238.0 284 53.9
Lsat_1_v5_gn_7_17861 Lactuca sativa HOM05D006314 ORTHO05D007970 2.7e-60 236.5 274 57.7
EL10Ac8g19905 Beta vulgaris HOM05D006314 ORTHO05D007970 4.6e-60 235.7 267 50.9
Ah.14g088200 Amaranthus hybridus HOM05D006314 ORTHO05D007970 7.9e-60 235.0 250 49.6
FAN21G1433 Fragaria x ananassa HOM05D006314 ORTHO05D007970 1.0e-59 234.6 258 48.8
ATR0618G448 Amborella trichopoda HOM05D006314 ORTHO05D007970 1.7e-59 233.8 271 55.4
CsaV3_6G049280 Cucumis sativus L. HOM05D006314 ORTHO05D007970 2.3e-59 233.4 270 56.3
Phvul.002G049200 Phaseolus vulgaris HOM05D006314 ORTHO05D007970 2.3e-59 233.4 257 62.3
RcHm_v2.0_Chr5g0004131 Rosa chinensis HOM05D006314 ORTHO05D007970 3.0e-59 233.0 245 63.7
SalBow8G4748 Salvia bowleyana HOM05D006314 ORTHO05D007970 5.1e-59 232.3 278 48.9
FvH4_3g02730 Fragaria vesca HOM05D006314 ORTHO05D007970 6.6e-59 231.9 246 63.4
AL6G48810 Arabidopsis lyrata HOM05D006314 ORTHO05D007970 8.7e-59 231.5 252 48.0
Medtr7g047630 Medicago truncatula HOM05D006314 ORTHO05D007970 2.5e-58 229.9 264 59.1
Medtr7g451810 Medicago truncatula HOM05D006314 ORTHO05D007970 2.5e-58 229.9 264 59.1
TPR.G10185 Trifolium pratense HOM05D006314 ORTHO05D007970 4.3e-58 229.2 249 63.9
Glyma.01G240700 Glycine max HOM05D006314 ORTHO05D007970 1.6e-57 227.3 255 60.4
VMungo1215G0781 Vigna mungo HOM05D006314 ORTHO05D007970 8.1e-57 224.9 256 59.8
DCAR_004187 Daucus carota HOM05D006314 ORTHO05D007970 1.1e-56 224.6 251 59.0
Migut.M01276 Erythranthe guttata HOM05D006314 ORTHO05D007970 1.1e-56 224.6 277 51.3
SEGI_37493 Sequoiadendron giganteum HOM05D006314 ORTHO05D007970 5.3e-56 222.2 255 47.5
Cc00_g17320 Coffea canephora HOM05D006314 ORTHO05D007970 9.0e-56 221.5 252 62.7
Lj1g0010466 Lotus japonicus HOM05D006314 ORTHO05D007970 9.0e-56 221.5 276 56.9
Lj1A1224T36 Lonicera japonica HOM05D006314 ORTHO05D007970 4.5e-55 219.2 235 64.3
Actinidia05538 Actinidia chinensis HOM05D006314 ORTHO05D007970 9.9e-55 218.0 245 59.2
Solyc03g031560.4 Solanum lycopersicum HOM05D006314 ORTHO05D007970 2.9e-54 216.5 273 43.6
CANSAT56G1066 Cannabis sativa HOM05D006314 ORTHO05D007970 4.9e-54 215.7 254 54.7
CDE05G2602 Ceratophyllum demersum HOM05D006314 ORTHO05D007970 6.4e-54 215.3 283 43.1
MELO3C007369.2 Cucumis melo HOM05D006314 ORTHO05D007970 1.2e-52 211.1 260 55.0
Nitab4.5_0004428g0040 Nicotiana tabacum HOM05D006314 ORTHO05D007970 1.6e-52 210.7 265 43.4
PGR031G0385 Punica granatum HOM05D006314 ORTHO05D007970 1.6e-52 210.7 283 50.5
Ca_07429_v3 Cicer arietinum L. HOM05D006314 ORTHO05D007970 3.5e-52 209.5 237 61.2
Rhsim13G0158200 Rhododendron simsii HOM05D006314 ORTHO05D007970 3.5e-52 209.5 283 57.2
Sopen03g005440 Solanum pennellii HOM05D006314 ORTHO05D007970 7.9e-52 208.4 265 52.5
THA.LOC104812945 Tarenaya hassleriana HOM05D006314 ORTHO05D007970 1.0e-51 208.0 275 54.2
Haze_06729 Corylus avellana HOM05D006314 ORTHO05D007970 1.8e-51 207.2 195 66.7
Zm00001eb306890 Zea mays HOM05D006314 ORTHO05D007970 3.0e-51 206.5 253 60.5
Actinidia26953 Actinidia chinensis HOM05D006314 ORTHO05D007970 8.7e-51 204.9 191 63.9
AL7G32880 Arabidopsis lyrata HOM05D006314 ORTHO05D007970 1.1e-50 204.5 253 46.6
AT4G05210 Arabidopsis thaliana HOM05D006314 ORTHO05D007970 1.1e-50 204.5 282 40.8
BcaB01g01893 Brassica carinata HOM05D006314 ORTHO05D007970 3.3e-50 203.0 304 40.5
Lalb_Chr16g0376341 Lupinus albus HOM05D006314 ORTHO05D007970 5.6e-50 202.2 254 59.4
Thecc.06G213300 Theobroma cacao HOM05D006314 ORTHO05D007970 9.6e-50 201.4 172 57.6
A09p25520 Brassica napus HOM05D006314 ORTHO05D007970 4.8e-49 199.1 252 42.9
Carub.0007s2019 Capsella rubella HOM05D006314 ORTHO05D007970 4.8e-49 199.1 252 44.4
Eucgr.D00832 Eucalyptus grandis HOM05D006314 ORTHO05D007970 6.2e-49 198.7 275 47.3
BcaC04g21385 Brassica carinata HOM05D006314 ORTHO05D007970 8.1e-49 198.4 252 42.5
C09p32430 Brassica napus HOM05D006314 ORTHO05D007970 8.1e-49 198.4 252 42.5
BolC9t56088H Brassica oleracea HOM05D006314 ORTHO05D007970 8.1e-49 198.4 252 42.5
ClCG01G022220 Citrullus lanatus HOM05D006314 ORTHO05D007970 2.4e-48 196.8 268 52.6
BraA09t38127Z Brassica rapa HOM05D006314 ORTHO05D007970 5.3e-48 195.7 252 42.1
AT4G21220 Arabidopsis thaliana HOM05D006314 ORTHO05D007970 6.9e-48 195.3 252 42.5
Thhalv10025838m.g Eutrema salsugineum HOM05D006314 ORTHO05D007970 6.9e-48 195.3 252 48.4
CARHR227820 Cardamine hirsuta HOM05D006314 ORTHO05D007970 1.2e-47 194.5 248 51.6
HPP92_009390 Vanilla planifolia HOM05D006314 ORTHO05D007970 1.5e-47 194.1 248 46.8
HPP92_009395 Vanilla planifolia HOM05D006314 ORTHO05D007970 4.5e-47 192.6 248 47.2
Sp6g03780 Schrenkiella parvula HOM05D006314 ORTHO05D007970 2.9e-46 189.9 273 54.2
vmacro03713 Vaccinium macrocarpon HOM05D006314 ORTHO05D007970 3.8e-46 189.5 143 62.9
Mapoly0013s0096 Marchantia polymorpha HOM05D006314 ORTHO05D007970 1.1e-45 188.0 260 44.2
Dinv17838 Davidia involucrata HOM05D006314 ORTHO05D007970 1.4e-45 187.6 182 54.9
Sc05g0008810 Simmondsia chinensis HOM05D006314 ORTHO05D007970 1.8e-43 180.6 235 55.7
FAN25G2977 Fragaria x ananassa HOM05D006314 ORTHO05D007970 2.3e-43 180.3 275 40.4
AUR62012635 Chenopodium quinoa HOM05D006314 ORTHO05D007970 5.7e-42 175.6 260 46.5
Psat3g152680 Pisum sativum HOM05D006314 ORTHO05D007970 7.4e-42 175.3 171 53.8
Aa31LG9G9230 Aethionema arabicum HOM05D006314 ORTHO05D007970 9.6e-42 174.9 249 41.4
Hma1.2p1_0729F.1_g209630 Hydrangea macrophylla HOM05D006314 ORTHO05D007970 3.1e-40 169.9 143 56.6
PGSC0003DMG400005049 Solanum tuberosum HOM05D006314 ORTHO05D007970 4.1e-40 169.5 157 51.6
TWI38G0264 Tripterygium wilfordii HOM05D006314 ORTHO05D007970 9.0e-40 168.3 279 37.6
Glyma.11G002900 Glycine max HOM05D006314 ORTHO05D007970 1.5e-39 167.5 186 47.8
Nitab4.5_0000900g0100 Nicotiana tabacum HOM05D006314 ORTHO05D007970 1.5e-39 167.5 265 47.9
AagrBONN_evm.TU.Sc2ySwM_228.2540 Anthoceros agrestis HOM05D006314 ORTHO05D007970 2.0e-39 167.2 140 51.4
arahy.Tifrunner.gnm1.ann1.937J55 Arachis hypogaea HOM05D006314 ORTHO05D007970 1.9e-37 160.6 236 51.3
arahy.Tifrunner.gnm1.ann1.PEH28W Arachis hypogaea HOM05D006314 ORTHO05D007970 1.9e-37 160.6 236 51.3
AUR62022021 Chenopodium quinoa HOM05D006314 ORTHO05D007970 1.2e-36 157.9 277 37.5
CBR_g20160 Chara braunii HOM05D006314 ORTHO05D007970 2.1e-36 157.1 244 46.3
MSTRG.16127 Avicennia marina HOM05D006314 ORTHO05D007970 1.9e-34 150.6 154 49.4
PRCOL_00005452 Prasinoderma coloniale HOM05D006314 ORTHO05D007970 1.7e-30 137.5 253 45.5
Sed0025568 Sechium edule HOM05D006314 ORTHO05D007970 2.9e-30 136.7 236 53.0
Pp3c4_25780 Physcomitrium patens HOM05D006314 ORTHO05D007970 5.0e-30 136.0 250 41.2
Nn5g27983 Nelumbo nucifera HOM05D006314 ORTHO05D007970 1.3e-25 121.3 156 46.2
CSS0045332 Camellia sinensis var. sinensis HOM05D006314 ORTHO05D007970 1.8e-24 117.5 148 60.8
Peaxi162Scf00781g00047 Petunia axillaris HOM05D006314 ORTHO05D007970 1.1e-21 108.2 288 43.1
CSS0018641 Camellia sinensis var. sinensis HOM05D006314 ORTHO05D007970 1.2e-20 104.8 102 50.0
unitig_748.g7139 Utricularia gibba HOM05D006350 ORTHO05D007850 1.2e-20 104.8 166 40.4
SMO004G0010 Selaginella moellendorffii HOM05D006314 ORTHO05D007970 2.1e-20 104.0 250 41.2
TAR627G0699 Trochodendron aralioides HOM05D006314 ORTHO05D007970 1.8e-19 100.9 132 58.3
Lsat_1_v5_gn_5_88320 Lactuca sativa HOM05D006314 ORTHO05D007970 1.1e-18 98.2 97 51.5
Os07g0134400 Oryza sativa ssp. japonica HOM05D006314 ORTHO05D007970 6.3e-17 92.4 115 39.1
SMO361G0013 Selaginella moellendorffii HOM05D006314 ORTHO05D007970 1.8e-16 90.9 146 34.9
QL05p075461 Quercus lobata HOM05D006314 ORTHO05D030082 3.5e-15 86.7 64 64.1
FAN25G3594 Fragaria x ananassa HOM05D006314 ORTHO05D007970 4.7e-12 76.3 43 79.1
Sp7g19320 Schrenkiella parvula HOM05D006314 ORTHO05D007970 6.1e-12 75.9 63 57.1
QL08p032503 Quercus lobata HOM05D006314 ORTHO05D030082 1.4e-08 64.7 60 56.7
MD10G1313900 Malus domestica HOM05D006314 ORTHO05D030082 2.2e-06 57.4 54 53.7


User provided reference genes

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