Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO596G0043 Papaver somniferum HOM05D003521 ORTHO05D000476 2.1e-55 218.8 111 100.0
PSO596G0006 Papaver somniferum HOM05D003521 ORTHO05D000476 8.7e-41 170.2 88 100.0
PSO210G6795 Papaver somniferum HOM05D003521 ORTHO05D000476 1.8e-17 92.8 63 79.4
PSO386G0042 Papaver somniferum HOM05D003521 ORTHO05D000476 1.8e-17 92.8 63 79.4
FvH4_6g31822 Fragaria vesca HOM05D003521 ORTHO05D000476 3.9e-17 91.7 65 73.8
FAN02G3342 Fragaria x ananassa HOM05D003521 ORTHO05D000476 3.9e-17 91.7 65 73.8
Sed0014905 Sechium edule HOM05D003521 ORTHO05D000476 3.9e-17 91.7 82 62.2
Aqoxy7G01582 Aquilegia oxysepala HOM05D003521 ORTHO05D000476 5.1e-17 91.3 67 71.6
Cpa.g.sc1513.1 Carica papaya HOM05D003521 ORTHO05D000476 6.7e-17 90.9 65 75.4
CDE08G0748 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 6.7e-17 90.9 64 73.4
Duzib160G0549 Durio zibethinus HOM05D003521 ORTHO05D000476 6.7e-17 90.9 82 62.2
arahy.Tifrunner.gnm1.ann1.ZR40ID Arachis hypogaea HOM05D003521 ORTHO05D000476 8.7e-17 90.5 101 52.5
CSS0015824 Camellia sinensis var. sinensis HOM05D003521 ORTHO05D000476 8.7e-17 90.5 71 73.2
FAN05G3380 Fragaria x ananassa HOM05D003521 ORTHO05D000476 8.7e-17 90.5 65 73.8
Nn2g11676 Nelumbo nucifera HOM05D003521 ORTHO05D000476 8.7e-17 90.5 101 52.5
Haze_16353 Corylus avellana HOM05D003521 ORTHO05D000476 1.1e-16 90.1 65 73.8
FAN14G2596 Fragaria x ananassa HOM05D003521 ORTHO05D000476 1.1e-16 90.1 65 72.3
Lj5C57T13 Lonicera japonica HOM05D003521 ORTHO05D000476 1.1e-16 90.1 65 75.4
GSVIVG01038690001 Vitis vinifera HOM05D003521 ORTHO05D000476 1.1e-16 90.1 65 73.8
CiPaw.02G148500 Carya illinoinensis HOM05D003521 ORTHO05D000476 1.5e-16 89.7 74 67.6
Nn3g18099 Nelumbo nucifera HOM05D003521 ORTHO05D000476 1.9e-16 89.4 80 62.5
TPR.G19044 Trifolium pratense HOM05D003521 ORTHO05D000476 1.9e-16 89.4 78 64.1
CANSAT56G3073 Cannabis sativa HOM05D003521 ORTHO05D000476 2.5e-16 89.0 65 72.3
Ciclev10024803m.g Citrus clementina HOM05D003521 ORTHO05D000476 2.5e-16 89.0 65 73.8
Lj3g0009081 Lotus japonicus HOM05D003521 ORTHO05D000476 2.5e-16 89.0 65 72.3
MD17G1190500 Malus domestica HOM05D003521 ORTHO05D000476 2.5e-16 89.0 65 72.3
Potri.003G052100 Populus trichocarpa HOM05D003521 ORTHO05D000476 2.5e-16 89.0 65 73.8
Sp5g35930 Schrenkiella parvula HOM05D003521 ORTHO05D000476 2.5e-16 89.0 69 68.1
CAN.G1152.8 Capsicum annuum HOM05D003521 ORTHO05D000476 3.3e-16 88.6 82 59.8
Ca_01135_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 3.3e-16 88.6 74 66.2
Duzib235G1126 Durio zibethinus HOM05D003521 ORTHO05D000476 3.3e-16 88.6 67 70.1
Sabra03G0027000 Salix brachista HOM05D003521 ORTHO05D000476 3.3e-16 88.6 72 72.2
Sc18g0003130 Simmondsia chinensis HOM05D003521 ORTHO05D000476 3.3e-16 88.6 65 72.3
CiPaw.01G235400 Carya illinoinensis HOM05D003521 ORTHO05D000476 4.3e-16 88.2 65 72.3
MELO3C023279.2 Cucumis melo HOM05D003521 ORTHO05D000476 4.3e-16 88.2 62 75.8
CsaV3_2G017940 Cucumis sativus L. HOM05D003521 ORTHO05D000476 4.3e-16 88.2 62 75.8
HanXRQChr04g0096181 Helianthus annuus HOM05D003521 ORTHO05D000476 4.3e-16 88.2 65 73.8
Peaxi162Scf00207g01030 Petunia axillaris HOM05D003521 ORTHO05D000476 4.3e-16 88.2 65 70.8
VMungo1080G0951 Vigna mungo HOM05D003521 ORTHO05D000476 4.3e-16 88.2 82 59.8
CSS0047293 Camellia sinensis var. sinensis HOM05D003521 ORTHO05D000476 5.7e-16 87.8 65 73.8
CDE02G1875 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 5.7e-16 87.8 65 70.8
Psat5g297520 Pisum sativum HOM05D003521 ORTHO05D000476 5.7e-16 87.8 65 72.3
RcHm_v2.0_Chr2g0139071 Rosa chinensis HOM05D003521 ORTHO05D000476 5.7e-16 87.8 82 59.8
vmacro18884 Vaccinium macrocarpon HOM05D003521 ORTHO05D000476 5.7e-16 87.8 65 72.3
QL05p021582 Quercus lobata HOM05D003521 ORTHO05D000476 7.4e-16 87.4 71 70.4
THA.LOC104812525 Tarenaya hassleriana HOM05D003521 ORTHO05D000476 7.4e-16 87.4 65 70.8
TWI12G1038 Tripterygium wilfordii HOM05D003521 ORTHO05D000476 7.4e-16 87.4 71 69.0
Atru.chr1.3345 Acer truncatum HOM05D003521 ORTHO05D000476 9.7e-16 87.0 65 70.8
arahy.Tifrunner.gnm1.ann1.M6JGC2 Arachis hypogaea HOM05D003521 ORTHO05D000476 9.7e-16 87.0 65 70.8
Dinv38015 Davidia involucrata HOM05D003521 ORTHO05D000476 9.7e-16 87.0 82 61.0
Lsat_1_v5_gn_1_35300 Lactuca sativa HOM05D003521 ORTHO05D000476 9.7e-16 87.0 65 72.3
Phvul.005G169100 Phaseolus vulgaris HOM05D003521 ORTHO05D000476 9.7e-16 87.0 65 70.8
COL.COLO4_30440 Corchorus olitorius HOM05D003521 ORTHO05D000476 1.3e-15 86.7 59 76.3
Dinv30477 Davidia involucrata HOM05D003521 ORTHO05D000476 1.3e-15 86.7 62 74.2
Lalb_Chr14g0373191 Lupinus albus HOM05D003521 ORTHO05D000476 1.3e-15 86.7 82 57.3
Lalb_Chr24g0395951 Lupinus albus HOM05D003521 ORTHO05D000476 1.3e-15 86.7 65 69.2
Nitab4.5_0010600g0010 Nicotiana tabacum HOM05D003521 ORTHO05D000476 1.3e-15 86.7 74 64.9
Potri.001G185050 Populus trichocarpa HOM05D003521 ORTHO05D000476 1.3e-15 86.7 65 70.8
Rhsim08G0223900 Rhododendron simsii HOM05D003521 ORTHO05D000476 1.3e-15 86.7 65 70.8
Sabra01G0155200 Salix brachista HOM05D003521 ORTHO05D000476 1.3e-15 86.7 65 70.8
Thecc.06G092900 Theobroma cacao HOM05D003521 ORTHO05D000476 1.3e-15 86.7 59 76.3
TWI18G0852 Tripterygium wilfordii HOM05D003521 ORTHO05D000476 1.3e-15 86.7 71 69.0
Zm00001eb343520 Zea mays HOM05D003521 ORTHO05D000476 1.3e-15 86.7 65 72.3
Aa31LG4G110 Aethionema arabicum HOM05D003521 ORTHO05D000476 1.6e-15 86.3 65 69.2
Carub.0002s2767 Capsella rubella HOM05D003521 ORTHO05D000476 1.6e-15 86.3 65 69.2
CARHR143590 Cardamine hirsuta HOM05D003521 ORTHO05D000476 1.6e-15 86.3 65 69.2
MD09G1208900 Malus domestica HOM05D003521 ORTHO05D000476 1.6e-15 86.3 71 69.0
Solyc06g066610.4 Solanum lycopersicum HOM05D003521 ORTHO05D000476 1.6e-15 86.3 82 57.3
Sopen06g024880 Solanum pennellii HOM05D003521 ORTHO05D000476 1.6e-15 86.3 82 57.3
Actinidia21685 Actinidia chinensis HOM05D003521 ORTHO05D000476 2.2e-15 85.9 65 73.8
A07p26350 Brassica napus HOM05D003521 ORTHO05D000476 2.2e-15 85.9 101 49.5
C06p28740 Brassica napus HOM05D003521 ORTHO05D000476 2.2e-15 85.9 101 49.5
Glyma.13G356900 Glycine max HOM05D003521 ORTHO05D000476 2.2e-15 85.9 65 69.2
Glyma.15G016700 Glycine max HOM05D003521 ORTHO05D000476 2.2e-15 85.9 65 69.2
HanXRQChr10g0313461 Helianthus annuus HOM05D003521 ORTHO05D000476 2.2e-15 85.9 82 58.5
Sed0003107 Sechium edule HOM05D003521 ORTHO05D000476 2.2e-15 85.9 62 74.2
SGA_v2.0_scaffold68G22978 Striga asiatica HOM05D003521 ORTHO05D000476 2.2e-15 85.9 59 76.3
TPR.G5155 Trifolium pratense HOM05D003521 ORTHO05D000476 2.2e-15 85.9 72 66.7
Zm00001eb295600 Zea mays HOM05D003521 ORTHO05D000476 2.2e-15 85.9 65 72.3
ATR0315G089 Amborella trichopoda HOM05D003521 ORTHO05D000476 2.8e-15 85.5 62 72.6
AL2G41720 Arabidopsis lyrata HOM05D003521 ORTHO05D000476 2.8e-15 85.5 65 69.2
Gohir.A10G081600 Gossypium hirsutum HOM05D003521 ORTHO05D000476 2.8e-15 85.5 56 78.6
Gohir.D10G069800 Gossypium hirsutum HOM05D003521 ORTHO05D000476 2.8e-15 85.5 56 78.6
Gorai.011G074100 Gossypium raimondii HOM05D003521 ORTHO05D000476 2.8e-15 85.5 56 78.6
SalBow7G4780 Salvia bowleyana HOM05D003521 ORTHO05D000476 2.8e-15 85.5 65 70.8
BolC6t38043H Brassica oleracea HOM05D003521 ORTHO05D000476 3.7e-15 85.1 66 66.7
BraA07t30279Z Brassica rapa HOM05D003521 ORTHO05D000476 3.7e-15 85.1 66 66.7
AUR62011668 Chenopodium quinoa HOM05D003521 ORTHO05D000476 3.7e-15 85.1 65 69.2
AUR62016491 Chenopodium quinoa HOM05D003521 ORTHO05D000476 3.7e-15 85.1 65 69.2
Hma1.2p1_1195F.1_g265855 Hydrangea macrophylla HOM05D003521 ORTHO05D000476 3.7e-15 85.1 79 62.0
Medtr2g101700 Medicago truncatula HOM05D003521 ORTHO05D000476 3.7e-15 85.1 74 62.2
Nitab4.5_0000351g0100 Nicotiana tabacum HOM05D003521 ORTHO05D000476 3.7e-15 85.1 91 54.9
Lsat_1_v5_gn_5_130960 Lactuca sativa HOM05D003521 ORTHO05D000476 4.8e-15 84.7 64 68.8
Lj9C509G5 Lonicera japonica HOM05D003521 ORTHO05D000476 4.8e-15 84.7 65 70.8
SGA_v2.0_scaffold4G02009 Striga asiatica HOM05D003521 ORTHO05D000476 4.8e-15 84.7 65 69.2
TAR626G0208 Trochodendron aralioides HOM05D003521 ORTHO05D000476 4.8e-15 84.7 63 71.4
Gohir.A05G132400 Gossypium hirsutum HOM05D003521 ORTHO05D000476 6.3e-15 84.3 56 76.8
Gohir.D05G131500 Gossypium hirsutum HOM05D003521 ORTHO05D000476 6.3e-15 84.3 56 76.8
Gorai.009G135200 Gossypium raimondii HOM05D003521 ORTHO05D000476 6.3e-15 84.3 56 76.8
Prupe.3G066400 Prunus persica HOM05D003521 ORTHO05D000476 6.3e-15 84.3 72 63.9
Thhalv10018077m.g Eutrema salsugineum HOM05D003521 ORTHO05D000476 8.2e-15 84.0 65 67.7
HanXRQChr12g0360801 Helianthus annuus HOM05D003521 ORTHO05D000476 8.2e-15 84.0 65 69.2
EL10Ac9g22035 Beta vulgaris HOM05D003521 ORTHO05D000476 1.1e-14 83.6 65 67.7
Cc04_g03000 Coffea canephora HOM05D003521 ORTHO05D000476 1.1e-14 83.6 59 72.9
Manes.11G037600 Manihot esculenta HOM05D003521 ORTHO05D000476 1.1e-14 83.6 62 72.6
TAR383G0706 Trochodendron aralioides HOM05D003521 ORTHO05D000476 1.8e-14 82.8 65 67.7
Eucgr.F03041 Eucalyptus grandis HOM05D003521 ORTHO05D000476 3.1e-14 82.0 101 47.5
Lalb_Chr04g0262811 Lupinus albus HOM05D003521 ORTHO05D000476 3.1e-14 82.0 74 62.2
AT1G79830 Arabidopsis thaliana HOM05D003521 ORTHO05D000476 4.1e-14 81.6 65 66.2
Ca_25389_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 6.9e-14 80.9 69 63.8
Os05g0559900 Oryza sativa ssp. japonica HOM05D003521 ORTHO05D000476 9.0e-14 80.5 59 74.6
unitig_62.g23765 Utricularia gibba HOM05D003521 ORTHO05D000476 9.0e-14 80.5 81 55.6
Migut.I00939 Erythranthe guttata HOM05D003521 ORTHO05D000476 1.2e-13 80.1 56 75.0
ECA232G1585 Erigeron canadensis HOM05D003521 ORTHO05D000142 1.5e-13 79.7 74 59.5
arahy.Tifrunner.gnm1.ann1.60NISA Arachis hypogaea HOM05D003521 ORTHO05D000476 2.6e-13 79.0 65 63.1
arahy.Tifrunner.gnm1.ann1.A5WQDM Arachis hypogaea HOM05D003521 ORTHO05D000476 2.6e-13 79.0 65 63.1
MSTRG.22661 Avicennia marina HOM05D003521 ORTHO05D000476 2.6e-13 79.0 52 76.9
DCAR_016209 Daucus carota HOM05D003521 ORTHO05D000476 3.4e-13 78.6 50 82.0
Ca_31247_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 4.5e-13 78.2 70 62.9
Migut.D01015 Erythranthe guttata HOM05D003521 ORTHO05D000476 4.5e-13 78.2 53 75.5
ECA247G0039 Erigeron canadensis HOM05D003521 ORTHO05D000476 7.6e-13 77.4 56 75.0
HPP92_003835 Vanilla planifolia HOM05D003521 ORTHO05D000476 1.0e-12 77.0 56 73.2
Hund06634 Selenicereus undatus HOM05D003521 ORTHO05D000476 2.5e-11 72.4 93 47.3
Hund00648 Selenicereus undatus HOM05D003521 ORTHO05D000476 3.2e-11 72.0 51 72.5
ECA234G0658 Erigeron canadensis HOM05D003521 ORTHO05D000476 7.2e-11 70.9 67 58.2
unitig_46.g18558 Utricularia gibba HOM05D003521 ORTHO05D000476 7.2e-11 70.9 70 55.7
Mapoly0013s0180 Marchantia polymorpha HOM05D003521 ORTHO05D000476 2.1e-10 69.3 83 48.2
HanXRQChr11g0325911 Helianthus annuus HOM05D003521 ORTHO05D000476 2.7e-10 68.9 62 61.3
HanXRQChr16g0500841 Helianthus annuus HOM05D003521 ORTHO05D000476 2.7e-10 68.9 65 58.5
SMO298G0028 Selaginella moellendorffii HOM05D003521 ORTHO05D000476 4.6e-10 68.2 56 60.7
Pp3c12_5050 Physcomitrium patens HOM05D003521 ORTHO05D000476 1.8e-09 66.2 82 46.3
AagrBONN_evm.TU.Sc2ySwM_344.1927 Anthoceros agrestis HOM05D003521 ORTHO05D000476 3.7e-07 58.5 52 59.6
CBR_g16051 Chara braunii HOM05D003521 ORTHO05D000476 4.8e-07 58.2 83 41.0
Actinidia24741 Actinidia chinensis HOM05D003521 ORTHO05D000476 8.2e-07 57.4 41 75.6
PRCOL_00000677 Prasinoderma coloniale HOM05D003521 ORTHO05D000476 9.1e-06 53.9 81 40.7


User provided reference genes

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