Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO548G0006 Papaver somniferum HOM05D000580 ORTHO05D006815 1.5e-33 145.6 74 100.0
PGR111G0073 Punica granatum HOM05D000580 ORTHO05D006815 9.3e-31 136.3 74 95.9
Hund29679 Selenicereus undatus HOM05D000580 ORTHO05D006815 1.2e-30 136.0 74 93.2
Lalb_Chr10g0093221 Lupinus albus HOM05D000580 ORTHO05D006815 1.6e-30 135.6 74 93.2
Lalb_Chr25g0283341 Lupinus albus HOM05D000580 ORTHO05D006815 1.6e-30 135.6 74 93.2
Gohir.A03G093700 Gossypium hirsutum HOM05D000580 ORTHO05D006815 3.5e-30 134.4 74 93.2
Potri.011G074901 Populus trichocarpa HOM05D000580 ORTHO05D006815 3.5e-30 134.4 74 94.6
Potri.011G113742 Populus trichocarpa HOM05D000580 ORTHO05D006815 3.5e-30 134.4 74 94.6
Potri.019G028200 Populus trichocarpa HOM05D000580 ORTHO05D006815 3.5e-30 134.4 74 94.6
Gohir.1Z078601 Gossypium hirsutum HOM05D000580 ORTHO05D006815 4.6e-30 134.0 74 93.2
Gohir.A09G043800 Gossypium hirsutum HOM05D000580 ORTHO05D006815 4.6e-30 134.0 74 93.2
Gohir.D01G102060 Gossypium hirsutum HOM05D000580 ORTHO05D006815 4.6e-30 134.0 74 93.2
Gorai.010G031500 Gossypium raimondii HOM05D000580 ORTHO05D006815 4.6e-30 134.0 74 93.2
CSS0026029 Camellia sinensis var. sinensis HOM05D000580 ORTHO05D006815 1.0e-29 132.9 74 91.9
Nn049s41914 Nelumbo nucifera HOM05D000580 ORTHO05D006815 1.0e-29 132.9 74 91.9
BNapus_Darmor_BZH_scaffold_253p00300 Brassica napus HOM05D000580 ORTHO05D006815 1.3e-29 132.5 74 93.2
BNapus_Darmor_BZH_scaffold_57p00040 Brassica napus HOM05D000580 ORTHO05D006815 1.3e-29 132.5 74 93.2
C06p23100 Brassica napus HOM05D000580 ORTHO05D006815 1.3e-29 132.5 74 93.2
BolSC29t60604H Brassica oleracea HOM05D000580 ORTHO05D006815 1.3e-29 132.5 74 93.2
BolSC35t60664H Brassica oleracea HOM05D000580 ORTHO05D006815 1.3e-29 132.5 74 93.2
BolSC35t60735H Brassica oleracea HOM05D000580 ORTHO05D006815 1.3e-29 132.5 74 93.2
BolSC46t61015H Brassica oleracea HOM05D000580 ORTHO05D006815 1.3e-29 132.5 74 93.2
BolSC47t61080H Brassica oleracea HOM05D000580 ORTHO05D006815 1.3e-29 132.5 74 93.2
BolSC49t61168H Brassica oleracea HOM05D000580 ORTHO05D006815 1.3e-29 132.5 74 93.2
BraA06t25380Z Brassica rapa HOM05D000580 ORTHO05D006815 1.3e-29 132.5 74 93.2
BraSC138t45558Z Brassica rapa HOM05D000580 ORTHO05D006815 1.3e-29 132.5 74 93.2
BraSC58t46498Z Brassica rapa HOM05D000580 ORTHO05D006815 1.3e-29 132.5 74 93.2
BraSC59t46576Z Brassica rapa HOM05D000580 ORTHO05D006815 1.3e-29 132.5 74 93.2
Carub.0006s2561 Capsella rubella HOM05D000580 ORTHO05D006815 1.3e-29 132.5 74 93.2
CAN.G219.32 Capsicum annuum HOM05D000580 ORTHO05D006815 1.3e-29 132.5 74 93.2
HanXRQChr05g0139711 Helianthus annuus HOM05D000580 ORTHO05D006815 1.7e-29 132.1 74 91.9
HanXRQChr05g0152611 Helianthus annuus HOM05D000580 ORTHO05D006815 1.7e-29 132.1 74 91.9
HanXRQChr08g0223961 Helianthus annuus HOM05D000580 ORTHO05D006815 1.7e-29 132.1 74 91.9
HanXRQChr10g0283641 Helianthus annuus HOM05D000580 ORTHO05D006815 1.7e-29 132.1 74 91.9
HanXRQChr10g0284331 Helianthus annuus HOM05D000580 ORTHO05D006815 1.7e-29 132.1 74 91.9
HanXRQChr10g0318111 Helianthus annuus HOM05D000580 ORTHO05D006815 1.7e-29 132.1 74 91.9
HanXRQChr11g0341921 Helianthus annuus HOM05D000580 ORTHO05D006815 1.7e-29 132.1 74 91.9
HanXRQChr14g0459311 Helianthus annuus HOM05D000580 ORTHO05D006815 1.7e-29 132.1 74 91.9
HanXRQCPg0580131 Helianthus annuus HOM05D000580 ORTHO05D006815 1.7e-29 132.1 74 91.9
Gohir.1Z049866 Gossypium hirsutum HOM05D000580 ORTHO05D006815 2.3e-29 131.7 74 91.9
Gohir.A12G178620 Gossypium hirsutum HOM05D000580 ORTHO05D006815 2.3e-29 131.7 74 91.9
Gohir.A12G178665 Gossypium hirsutum HOM05D000580 ORTHO05D006815 2.3e-29 131.7 74 91.9
RcHm_v2.0_CPg0501961 Rosa chinensis HOM05D000580 ORTHO05D006815 2.3e-29 131.7 75 90.7
SGA_v2.0_scaffold479G52254 Striga asiatica HOM05D000580 ORTHO05D006815 2.3e-29 131.7 74 90.5
AL2G20610 Arabidopsis lyrata HOM05D000580 ORTHO05D006815 3.9e-29 131.0 74 91.9
AL2G21660 Arabidopsis lyrata HOM05D000580 ORTHO05D006815 3.9e-29 131.0 74 91.9
ATCG00710 Arabidopsis thaliana HOM05D000580 ORTHO05D006815 3.9e-29 131.0 74 91.9
CAN.G131.5 Capsicum annuum HOM05D000580 ORTHO05D006815 3.9e-29 131.0 74 90.5
CAN.G1513.10 Capsicum annuum HOM05D000580 ORTHO05D006815 3.9e-29 131.0 74 90.5
CARHR282200 Cardamine hirsuta HOM05D000580 ORTHO05D006815 3.9e-29 131.0 74 91.9
Eucgr.F03245 Eucalyptus grandis HOM05D000580 ORTHO05D006815 3.9e-29 131.0 74 93.2
Gohir.A09G103100 Gossypium hirsutum HOM05D000580 ORTHO05D006815 3.9e-29 131.0 74 91.9
Gohir.A12G178630 Gossypium hirsutum HOM05D000580 ORTHO05D006815 6.6e-29 130.2 74 90.5
HanXRQChr02g0038651 Helianthus annuus HOM05D000580 ORTHO05D006815 8.7e-29 129.8 74 89.2
HanXRQChr02g0052691 Helianthus annuus HOM05D000580 ORTHO05D006815 8.7e-29 129.8 74 90.5
Hma1.2p1_0218F.1_g092720 Hydrangea macrophylla HOM05D000580 ORTHO05D006815 8.7e-29 129.8 74 89.2
Hma1.2p1_2223F.1_g317406 Hydrangea macrophylla HOM05D000580 ORTHO05D006815 8.7e-29 129.8 74 89.2
CAN.G1595.6 Capsicum annuum HOM05D000580 ORTHO05D006815 1.1e-28 129.4 74 89.2
Gohir.A02G100500 Gossypium hirsutum HOM05D000580 ORTHO05D006815 1.1e-28 129.4 74 90.5
Gohir.A12G228900 Gossypium hirsutum HOM05D000580 ORTHO05D006815 1.5e-28 129.0 74 89.2
LjContig00319g0006223 Lotus japonicus HOM05D000580 ORTHO05D006815 1.5e-28 129.0 74 86.5
LjContig00319g0024255 Lotus japonicus HOM05D000580 ORTHO05D006815 1.5e-28 129.0 74 86.5
Gohir.A05G326916 Gossypium hirsutum HOM05D000580 ORTHO05D006815 3.3e-28 127.9 74 90.5
RcHm_v2.0_Chr6g0260481 Rosa chinensis HOM05D000580 ORTHO05D006815 3.3e-28 127.9 75 88.0
C06p22890 Brassica napus HOM05D000580 ORTHO05D006815 4.3e-28 127.5 74 90.5
Sed0004233 Sechium edule HOM05D000580 ORTHO05D006815 4.3e-28 127.5 74 87.8
Sed0008111 Sechium edule HOM05D000580 ORTHO05D006815 4.3e-28 127.5 74 87.8
Sed0015899 Sechium edule HOM05D000580 ORTHO05D006815 4.3e-28 127.5 74 87.8
Lsat_1_v5_gn_5_67060 Lactuca sativa HOM05D000580 ORTHO05D006815 7.3e-28 126.7 74 89.2
RcHm_v2.0_Chr4g0390611 Rosa chinensis HOM05D000580 ORTHO05D006815 1.3e-27 125.9 75 88.0
Gohir.A01G128325 Gossypium hirsutum HOM05D000580 ORTHO05D006815 2.1e-27 125.2 74 86.5
CiPaw.10G124800 Carya illinoinensis HOM05D000580 ORTHO05D006815 2.8e-27 124.8 74 86.5
Eucgr.B01572 Eucalyptus grandis HOM05D000580 ORTHO05D006815 2.8e-27 124.8 69 92.8
Gohir.A13G110000 Gossypium hirsutum HOM05D000580 ORTHO05D006815 2.8e-27 124.8 74 87.8
CARHR292710 Cardamine hirsuta HOM05D000580 ORTHO05D006815 3.6e-27 124.4 74 87.8
BolC2t08916H Brassica oleracea HOM05D000580 ORTHO05D006815 4.8e-27 124.0 70 91.4
DCAR_032514 Daucus carota HOM05D000580 ORTHO05D006815 4.8e-27 124.0 74 86.5
HanXRQChr04g0094321 Helianthus annuus HOM05D000580 ORTHO05D006815 4.8e-27 124.0 74 87.8
Gohir.D02G147200 Gossypium hirsutum HOM05D000580 ORTHO05D006815 1.1e-26 122.9 74 86.5
Gohir.D04G149675 Gossypium hirsutum HOM05D000580 ORTHO05D006815 1.1e-26 122.9 71 87.3
Gorai.005G164900 Gossypium raimondii HOM05D000580 ORTHO05D006815 1.4e-26 122.5 74 86.5
CAN.G1478.5 Capsicum annuum HOM05D000580 ORTHO05D006815 3.1e-26 121.3 85 80.0
HanXRQChr11g0345231 Helianthus annuus HOM05D000580 ORTHO05D006815 4.0e-26 120.9 74 85.1
Hund08570 Selenicereus undatus HOM05D000580 ORTHO05D006815 5.3e-26 120.6 72 87.5
Gohir.A05G286600 Gossypium hirsutum HOM05D000580 ORTHO05D006815 6.9e-26 120.2 74 85.1
Gorai.008G286600 Gossypium raimondii HOM05D000580 ORTHO05D006815 6.9e-26 120.2 74 85.1
Prupe.7G021700 Prunus persica HOM05D000580 ORTHO05D006815 6.9e-26 120.2 75 82.7
Hma1.2p1_0149F.1_g066500 Hydrangea macrophylla HOM05D000580 ORTHO05D006815 2.0e-25 118.6 74 79.7
Potri.002G174001 Populus trichocarpa HOM05D000580 ORTHO05D006815 2.0e-25 118.6 72 84.7
CAN.G129.14 Capsicum annuum HOM05D000580 ORTHO05D006815 2.6e-25 118.2 74 82.4
Gohir.A05G301450 Gossypium hirsutum HOM05D000580 ORTHO05D006815 4.4e-25 117.5 74 85.1
CAN.G29.17 Capsicum annuum HOM05D000580 ORTHO05D006815 9.9e-25 116.3 74 82.4
Duzib026G0003 Durio zibethinus HOM05D000580 ORTHO05D001362 9.9e-25 116.3 64 90.6
Duzib124G0006 Durio zibethinus HOM05D000580 ORTHO05D001362 9.9e-25 116.3 64 90.6
Duzib237G0002 Durio zibethinus HOM05D000580 ORTHO05D001362 9.9e-25 116.3 64 90.6
Duzib252G0006 Durio zibethinus HOM05D000580 ORTHO05D001362 9.9e-25 116.3 64 90.6
Duzib256G0004 Durio zibethinus HOM05D000580 ORTHO05D001362 9.9e-25 116.3 64 90.6
Gohir.A09G103075 Gossypium hirsutum HOM05D000580 ORTHO05D006815 9.9e-25 116.3 69 88.4
CAN.G2018.9 Capsicum annuum HOM05D000580 ORTHO05D006815 1.7e-24 115.5 74 82.4
Medtr2g062930 Medicago truncatula HOM05D000580 ORTHO05D006815 2.9e-24 114.8 66 86.4
Nitab4.5_0001105g0140 Nicotiana tabacum HOM05D000580 ORTHO05D006815 3.8e-24 114.4 74 81.1
Gohir.D02G096801 Gossypium hirsutum HOM05D000580 ORTHO05D006815 6.4e-24 113.6 67 85.1
Gohir.D09G103600 Gossypium hirsutum HOM05D000580 ORTHO05D006815 6.4e-24 113.6 74 81.1
Gorai.005G110300 Gossypium raimondii HOM05D000580 ORTHO05D006815 8.4e-24 113.2 67 86.6
Sed0008946 Sechium edule HOM05D000580 ORTHO05D006815 1.4e-23 112.5 74 82.4
Glyma.03G065000 Glycine max HOM05D000580 ORTHO05D006815 2.4e-23 111.7 74 79.7
Lalb_Chr23g0274371 Lupinus albus HOM05D000580 ORTHO05D006815 2.4e-23 111.7 74 79.7
Migut.H01967 Erythranthe guttata HOM05D000580 ORTHO05D006815 4.2e-23 110.9 61 91.8
Nitab4.5_0010531g0030 Nicotiana tabacum HOM05D000580 ORTHO05D006815 2.1e-22 108.6 74 81.1
EL10Ac1g01194 Beta vulgaris HOM05D000580 ORTHO05D001362 3.5e-22 107.8 63 88.9
CAN.G648.1 Capsicum annuum HOM05D000580 ORTHO05D006815 1.3e-21 105.9 74 74.3
Hund10713 Selenicereus undatus HOM05D000580 ORTHO05D001362 2.3e-21 105.1 71 77.5
C07p15330 Brassica napus HOM05D000580 ORTHO05D006815 8.7e-21 103.2 62 80.6
Gohir.A10G070250 Gossypium hirsutum HOM05D000580 ORTHO05D006815 2.5e-20 101.7 54 92.6
Glyma.17G186400 Glycine max HOM05D000580 ORTHO05D006815 9.6e-20 99.8 58 86.2
Psat0s7142g0160 Pisum sativum HOM05D000580 ORTHO05D001785 2.1e-19 98.6 51 94.1
Psat6g181560 Pisum sativum HOM05D000580 ORTHO05D001785 2.1e-19 98.6 51 94.1
Peaxi162Scf00299g10016 Petunia axillaris HOM05D000580 ORTHO05D006815 4.8e-19 97.4 65 80.0
SabraPtG0004100 Salix brachista HOM05D000580 ORTHO05D001785 4.8e-19 97.4 51 94.1
Solyc00g500026.1 Solanum lycopersicum HOM05D000580 ORTHO05D006815 6.2e-19 97.1 51 94.1
Solyc00g500072.1 Solanum lycopersicum HOM05D000580 ORTHO05D006815 6.2e-19 97.1 51 94.1
Medtr4g051375 Medicago truncatula HOM05D000580 ORTHO05D006815 1.4e-18 95.9 51 92.2
Ah.10g027190 Amaranthus hybridus HOM05D000580 ORTHO05D001785 1.8e-18 95.5 51 92.2
Ah.10g027480 Amaranthus hybridus HOM05D000580 ORTHO05D001785 1.8e-18 95.5 51 92.2
SabraMtG0010300 Salix brachista HOM05D000580 ORTHO05D006815 1.8e-18 95.5 50 94.0
HanXRQChr01g0020261 Helianthus annuus HOM05D000580 ORTHO05D001785 2.4e-18 95.1 51 90.2
HanXRQChr07g0193501 Helianthus annuus HOM05D000580 ORTHO05D006815 2.4e-18 95.1 52 88.5
HanXRQChr10g0299321 Helianthus annuus HOM05D000580 ORTHO05D001785 2.4e-18 95.1 51 90.2
HanXRQChr11g0326921 Helianthus annuus HOM05D000580 ORTHO05D001785 2.4e-18 95.1 51 90.2
MELO3C033895.2 Cucumis melo HOM05D000580 ORTHO05D006815 4.0e-18 94.4 74 68.9
Psat7g045200 Pisum sativum HOM05D000580 ORTHO05D006815 4.0e-18 94.4 61 78.7
Ah.10g028960 Amaranthus hybridus HOM05D000580 ORTHO05D001785 5.3e-18 94.0 51 90.2
Psat0s1446g0280 Pisum sativum HOM05D000580 ORTHO05D001785 6.9e-18 93.6 51 88.2
HanXRQChr02g0052541 Helianthus annuus HOM05D000580 ORTHO05D001785 1.2e-17 92.8 51 88.2
Peaxi162Scf00527g00037 Petunia axillaris HOM05D000580 ORTHO05D006815 1.5e-17 92.4 51 90.2
Ah.10g027360 Amaranthus hybridus HOM05D000580 ORTHO05D006815 2.6e-17 91.7 63 76.2
Nitab4.5_0004376g0090 Nicotiana tabacum HOM05D000580 ORTHO05D006815 9.9e-17 89.7 51 90.2
Sc07g0006580 Simmondsia chinensis HOM05D000580 ORTHO05D006815 1.7e-16 89.0 53 81.1
Lsat_1_v5_gn_5_50340 Lactuca sativa HOM05D000580 ORTHO05D006815 8.4e-16 86.7 51 84.3
Sp5g12490 Schrenkiella parvula HOM05D000580 ORTHO05D006815 4.2e-15 84.3 44 90.9
LjContig00318g0018353 Lotus japonicus HOM05D000580 ORTHO05D001785 1.0e-13 79.7 43 86.0
SMO086G0029 Selaginella moellendorffii HOM05D000580 ORTHO05D006815 1.3e-13 79.3 75 58.7
Lalb_Chr01g0009811 Lupinus albus HOM05D000580 ORTHO05D006815 2.3e-13 78.6 41 90.2
Glyma.05G092100 Glycine max HOM05D000580 ORTHO05D006815 3.0e-13 78.2 42 88.1
MD04G1032200 Malus domestica HOM05D000580 ORTHO05D006815 1.1e-12 76.3 60 58.3
BolSC29t60484H Brassica oleracea HOM05D000580 ORTHO05D006815 1.5e-12 75.9 40 90.0
Solyc11g006675.1 Solanum lycopersicum HOM05D000580 ORTHO05D006815 7.4e-12 73.6 38 92.1
RcHm_v2.0_Chr2g0140191 Rosa chinensis HOM05D000580 ORTHO05D006815 9.6e-12 73.2 43 83.7
BolSC46t61022H Brassica oleracea HOM05D000580 ORTHO05D006815 1.1e-10 69.7 37 89.2
ClCG02G007580 Citrullus lanatus HOM05D000580 ORTHO05D006815 2.6e-09 65.1 36 88.9
Migut.L00683 Erythranthe guttata HOM05D000580 ORTHO05D006815 4.5e-09 64.3 45 68.9
QL93p1043_0018 Quercus lobata HOM05D000580 ORTHO05D001785 4.5e-09 64.3 35 91.4
Lalb_Chr23g0274191 Lupinus albus HOM05D000580 ORTHO05D006815 3.8e-08 61.2 38 81.6
EL10As4g23447 Beta vulgaris HOM05D000580 ORTHO05D006815 1.2e-06 56.2 38 73.7
Glyma.19G056032 Glycine max HOM05D000580 ORTHO05D006815 3.5e-06 54.7 32 87.5
Potri.011G074742 Populus trichocarpa HOM05D000580 ORTHO05D006815 4.6e-06 54.3 32 93.8
Migut.D01365 Erythranthe guttata HOM05D000580 ORTHO05D006815 6.0e-06 53.9 28 92.9


User provided reference genes

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